Gene annotation
Transcriptome id Sobic.003G203300.1,Sobic.003G203300.4
Synonym Sb03g026530
Functional annotation stress regulated protein, putative, expressed
UniProt A0A1W0VY99 , C5XPI7
Pfam -
Panther DB PTHR33471 PTHR33471:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G27290 : -
RAP-DB (Rice) LOC_Os01g28540.1 : stress regulated protein, putative, expressed
MaizeGDB (Corn) Zm00025a024592
Brachypodium -
Barley HORVU7Hr1G089830.7 , HORVU7Hr1G089830.6 , HORVU7Hr1G089830.5 , HORVU7Hr1G089830.4 , HORVU7Hr1G089830.3 , HORVU7Hr1G089830.2 , HORVU7Hr1G089830.1 , HORVU7Hr1G089830.9 , HORVU7Hr1G089830.8 , HORVU7Hr1G089830.15 , HORVU7Hr1G089830.14 , HORVU7Hr1G089830.13 , HORVU7Hr1G089830.12 , HORVU7Hr1G089830.11 , HORVU7Hr1G089830.10
Wheat TraesCS7A02G375700 , TraesCS7B02G277300 , TraesCS7D02G372200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
2 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
3 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
4 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
5 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
6 Sobic.001G504400 expressed protein -
7 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
8 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
9 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
10 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
11 Sobic.010G110400 - -
12 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
13 Sobic.009G073900 thioredoxin, putative, expressed -
14 Sobic.001G077300 thioredoxin, putative, expressed -
15 Sobic.009G207900 expressed protein -
16 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -
19 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
20 Sobic.001G060500 YT521-B, putative, expressed -


Gene co-expression network
sample Sobic003G203300 Sobic003G203300 Sobic006G232600 Sobic006G232600 Sobic003G203300--Sobic006G232600 Sobic008G074000 Sobic008G074000 Sobic003G203300--Sobic008G074000 Sobic001G378100 Sobic001G378100 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic009G170200 Sobic009G170200 Sobic003G203300--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic006G233700 Sobic006G233700 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400 Sobic006G232600--Sobic009G170200 Sobic007G087100 Sobic007G087100 Sobic006G232600--Sobic007G087100 Sobic003G003450 Sobic003G003450 Sobic006G232600--Sobic003G003450 Sobic006G232600--Sobic001G378100 Sobic009G073900 Sobic009G073900 Sobic006G232600--Sobic009G073900 Sobic006G232600--Sobic006G233700 Sobic009G103000 Sobic009G103000 Sobic006G232600--Sobic009G103000 Sobic001G077300 Sobic001G077300 Sobic006G232600--Sobic001G077300 Sobic006G232600--Sobic002G081400 Sobic003G070900 Sobic003G070900 Sobic008G074000--Sobic003G070900 Sobic007G103400 Sobic007G103400 Sobic008G074000--Sobic007G103400 Sobic002G133900 Sobic002G133900 Sobic008G074000--Sobic002G133900 Sobic003G233700 Sobic003G233700 Sobic008G074000--Sobic003G233700 Sobic009G237000 Sobic009G237000 Sobic008G074000--Sobic009G237000 Sobic008G074000--Sobic001G504400 Sobic004G353100 Sobic004G353100 Sobic008G074000--Sobic004G353100 Sobic008G074000--Sobic009G170200 Sobic009G219100 Sobic009G219100 Sobic008G074000--Sobic009G219100 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic001G378100--Sobic006G232600 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic009G093100--Sobic001G077300 Sobic001G359300 Sobic001G359300 Sobic009G093100--Sobic001G359300 Sobic004G019800 Sobic004G019800 Sobic009G093100--Sobic004G019800 Sobic006G065100 Sobic006G065100 Sobic009G093100--Sobic006G065100 Sobic009G093100--Sobic001G536700 Sobic009G093100--Sobic009G073900 Sobic009G093100--Sobic001G378100 Sobic002G206300 Sobic002G206300 Sobic009G093100--Sobic002G206300 Sobic001G333800 Sobic001G333800 Sobic009G093100--Sobic001G333800 Sobic009G170200--Sobic003G070900 Sobic009G170200--Sobic006G232600 Sobic009G170200--Sobic007G087100 Sobic004G103300 Sobic004G103300 Sobic009G170200--Sobic004G103300 Sobic009G170200--Sobic002G133900 Sobic009G170200--Sobic001G077300 Sobic009G170200--Sobic004G353100 Sobic009G170200--Sobic001G378100 Sobic009G170200--Sobic007G103400 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic009G038701 Sobic009G038701 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G504400--Sobic001G378100 Sobic004G317700 Sobic004G317700 Sobic002G081400--Sobic004G317700 Sobic004G271600 Sobic004G271600 Sobic002G081400--Sobic004G271600 Sobic002G081400--Sobic009G073900 Sobic002G081400--Sobic001G077300 Sobic002G081400--Sobic003G003450 Sobic006G090100 Sobic006G090100 Sobic002G081400--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic002G081400--Sobic001G509200 Sobic007G124500 Sobic007G124500 Sobic002G081400--Sobic007G124500 Sobic002G081400--Sobic009G170200 Sobic006G233700--Sobic006G232600 Sobic001G500600 Sobic001G500600 Sobic006G233700--Sobic001G500600 Sobic010G110400 Sobic010G110400 Sobic006G233700--Sobic010G110400 Sobic006G233700--Sobic009G170200 Sobic001G060500 Sobic001G060500 Sobic006G233700--Sobic001G060500 Sobic006G233700--Sobic003G203300 Sobic010G171600 Sobic010G171600 Sobic006G233700--Sobic010G171600 Sobic006G233700--Sobic003G070900 Sobic001G219700 Sobic001G219700 Sobic006G233700--Sobic001G219700 Sobic002G072400 Sobic002G072400 Sobic004G207400--Sobic002G072400 Sobic004G207400--Sobic006G232600 Sobic004G238200 Sobic004G238200 Sobic004G207400--Sobic004G238200 Sobic004G207400--Sobic009G170200 Sobic004G207400--Sobic003G203300 Sobic002G225100 Sobic002G225100 Sobic004G207400--Sobic002G225100 Sobic004G300100 Sobic004G300100 Sobic004G207400--Sobic004G300100 Sobic004G281900 Sobic004G281900 Sobic004G207400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic004G207400--Sobic007G166200
Octagon: transcription factors


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