Gene annotation
Transcriptome id Sobic.002G173100.1
Synonym CRCK3
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt C5X9W1
Pfam PF00560 PF13191 PF07714
Panther DB PTHR23155
NCBI CDD KOG1187; Serine/threonine protein kinase KOG4658Apoptotic ATPase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G11520 : calmodulin-binding receptor-like cytoplasmic kinase 3
RAP-DB (Rice) LOC_Os09g15850.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) Zm00025a046532
Brachypodium KQJ89861
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
2 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
3 Sobic.003G203300 stress regulated protein, putative, expressed -
4 Sobic.001G060500 YT521-B, putative, expressed -
5 Sobic.003G190000 PPR repeat domain containing protein, putative, expressed -
6 Sobic.005G075100 rp3 protein, putative, expressed -
7 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
8 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
9 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
10 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
11 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
12 Sobic.007G185300 - -
13 Sobic.004G026500 expressed protein -
14 Sobic.001G413000 ABC transporter family protein, putative, expressed -
15 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
16 Sobic.003G306600 acetamidase, putative, expressed K01455: formamidase
17 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
18 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
19 Sobic.009G207900 expressed protein -
20 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G173100 Sobic002G173100 Sobic003G190100 Sobic003G190100 Sobic002G173100--Sobic003G190100 Sobic003G108900 Sobic003G108900 Sobic002G173100--Sobic003G108900 Sobic003G203300 Sobic003G203300 Sobic002G173100--Sobic003G203300 Sobic001G060500 Sobic001G060500 Sobic002G173100--Sobic001G060500 Sobic003G190000 Sobic003G190000 Sobic002G173100--Sobic003G190000 Sobic005G075100 Sobic005G075100 Sobic002G173100--Sobic005G075100 Sobic004G271600 Sobic004G271600 Sobic002G173100--Sobic004G271600 Sobic005G179300 Sobic005G179300 Sobic002G173100--Sobic005G179300 Sobic004G300000 Sobic004G300000 Sobic002G173100--Sobic004G300000 Sobic003G190100--Sobic002G173100 Sobic005G093800 Sobic005G093800 Sobic003G190100--Sobic005G093800 Sobic002G077400 Sobic002G077400 Sobic003G190100--Sobic002G077400 Sobic002G244200 Sobic002G244200 Sobic003G190100--Sobic002G244200 Sobic003G190100--Sobic004G271600 Sobic007G185300 Sobic007G185300 Sobic003G190100--Sobic007G185300 Sobic007G133000 Sobic007G133000 Sobic003G190100--Sobic007G133000 Sobic006G177900 Sobic006G177900 Sobic003G190100--Sobic006G177900 Sobic003G190100--Sobic005G179300 Sobic004G165900 Sobic004G165900 Sobic003G108900--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic003G108900--Sobic004G252500 Sobic004G300100 Sobic004G300100 Sobic003G108900--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic003G108900--Sobic010G231500 Sobic003G108900--Sobic002G173100 Sobic003G108900--Sobic004G300000 Sobic009G014100 Sobic009G014100 Sobic003G108900--Sobic009G014100 Sobic003G108900--Sobic004G271600 Sobic004G207400 Sobic004G207400 Sobic003G108900--Sobic004G207400 Sobic006G232600 Sobic006G232600 Sobic003G203300--Sobic006G232600 Sobic008G074000 Sobic008G074000 Sobic003G203300--Sobic008G074000 Sobic001G378100 Sobic001G378100 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic009G170200 Sobic009G170200 Sobic003G203300--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic006G233700 Sobic006G233700 Sobic003G203300--Sobic006G233700 Sobic003G203300--Sobic004G207400 Sobic001G060500--Sobic006G233700 Sobic004G179400 Sobic004G179400 Sobic001G060500--Sobic004G179400 Sobic002G073200 Sobic002G073200 Sobic001G060500--Sobic002G073200 Sobic001G060500--Sobic003G190000 Sobic001G060500--Sobic003G203300 Sobic001G060500--Sobic002G173100 Sobic010G110400 Sobic010G110400 Sobic001G060500--Sobic010G110400 Sobic003G125900 Sobic003G125900 Sobic001G060500--Sobic003G125900 Sobic001G060500--Sobic003G108900 Sobic003G190000--Sobic001G060500 Sobic003G190000--Sobic002G073200 Sobic003G190000--Sobic002G173100 Sobic010G197000 Sobic010G197000 Sobic003G190000--Sobic010G197000 Sobic003G190000--Sobic003G203300 Sobic003G190000--Sobic009G014100 Sobic003G190000--Sobic005G075100 Sobic005G142800 Sobic005G142800 Sobic003G190000--Sobic005G142800 Sobic001G219700 Sobic001G219700 Sobic003G190000--Sobic001G219700 Sobic002G115050 Sobic002G115050 Sobic005G075100--Sobic002G115050 Sobic004G181600 Sobic004G181600 Sobic005G075100--Sobic004G181600 Sobic005G075100--Sobic002G173100 Sobic002G345700 Sobic002G345700 Sobic005G075100--Sobic002G345700 Sobic005G075100--Sobic003G190000 Sobic010G141966 Sobic010G141966 Sobic005G075100--Sobic010G141966 Sobic006G133900 Sobic006G133900 Sobic005G075100--Sobic006G133900 Sobic006G219600 Sobic006G219600 Sobic005G075100--Sobic006G219600 Sobic009G097200 Sobic009G097200 Sobic005G075100--Sobic009G097200 Sobic002G132400 Sobic002G132400 Sobic004G271600--Sobic002G132400 Sobic004G271600--Sobic002G081400 Sobic010G100900 Sobic010G100900 Sobic004G271600--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic004G271600--Sobic002G351200 Sobic007G124500 Sobic007G124500 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic006G090100 Sobic006G090100 Sobic004G271600--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic004G271600--Sobic001G509200 Sobic002G060800 Sobic002G060800 Sobic004G271600--Sobic002G060800 Sobic005G179300--Sobic006G090100 Sobic001G077300 Sobic001G077300 Sobic005G179300--Sobic001G077300 Sobic003G073800 Sobic003G073800 Sobic005G179300--Sobic003G073800 Sobic006G212800 Sobic006G212800 Sobic005G179300--Sobic006G212800 Sobic009G207900 Sobic009G207900 Sobic005G179300--Sobic009G207900 Sobic001G207800 Sobic001G207800 Sobic005G179300--Sobic001G207800 Sobic009G219100 Sobic009G219100 Sobic005G179300--Sobic009G219100 Sobic005G179300--Sobic004G271600 Sobic005G179300--Sobic002G081400 Sobic010G035500 Sobic010G035500 Sobic004G300000--Sobic010G035500 Sobic002G025700 Sobic002G025700 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic006G214700 Sobic006G214700 Sobic004G300000--Sobic006G214700 Sobic004G300000--Sobic003G108900 Sobic004G300000--Sobic010G197000 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600
Octagon: transcription factors


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