Gene annotation
Transcriptome id Sobic.005G093800.1
Synonym RPS3, RPM1
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5Y8C3
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF624
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g11990.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033927
Brachypodium -
Barley HORVU3Hr1G096920.8 , HORVU3Hr1G096920.3 , HORVU3Hr1G096920.6 , HORVU3Hr1G096920.1 , HORVU3Hr1G096920.2 , HORVU3Hr1G096920.5 , HORVU3Hr1G096920.4 , HORVU4Hr1G015770.10 , HORVU4Hr1G015770.8 , HORVU4Hr1G015770.9 , HORVU4Hr1G015770.2 , HORVU4Hr1G015770.3 , HORVU4Hr1G015770.1 , HORVU4Hr1G015770.6 , HORVU4Hr1G015770.7 , HORVU4Hr1G015770.4 , HORVU4Hr1G015770.5
Wheat TraesCS3B02G483700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
2 Sobic.006G177900 - -
3 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
4 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
5 Sobic.002G077400 receptor-like protein kinase precursor, putative, expressed -
6 Sobic.010G121200 - -
7 Sobic.002G115050 - -
8 Sobic.008G166550 - -
9 Sobic.001G492600 VQ domain containing protein, putative, expressed -
10 Sobic.005G156400 phytosulfokine receptor precursor, putative, expressed -
11 Sobic.001G250000 - -
12 Sobic.007G202300 expressed protein -
13 Sobic.002G244200 nucleolar GTP-binding protein 1, putative, expressed -
14 Sobic.009G130000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
15 Sobic.005G075100 rp3 protein, putative, expressed -
16 Sobic.003G080700 Ser/Thr protein kinase, putative, expressed -
17 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
19 Sobic.001G227900 -(PubMedID : 21930910)@-(PubMedID : 24884377)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
20 Sobic.002G132400 -(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic005G093800 Sobic005G093800 Sobic003G190100 Sobic003G190100 Sobic005G093800--Sobic003G190100 Sobic006G177900 Sobic006G177900 Sobic005G093800--Sobic006G177900 Sobic004G271600 Sobic004G271600 Sobic005G093800--Sobic004G271600 Sobic002G173100 Sobic002G173100 Sobic005G093800--Sobic002G173100 Sobic002G077400 Sobic002G077400 Sobic005G093800--Sobic002G077400 Sobic010G121200 Sobic010G121200 Sobic005G093800--Sobic010G121200 Sobic002G115050 Sobic002G115050 Sobic005G093800--Sobic002G115050 Sobic008G166550 Sobic008G166550 Sobic005G093800--Sobic008G166550 Sobic001G492600 Sobic001G492600 Sobic005G093800--Sobic001G492600 Sobic003G190100--Sobic002G173100 Sobic003G190100--Sobic005G093800 Sobic003G190100--Sobic002G077400 Sobic002G244200 Sobic002G244200 Sobic003G190100--Sobic002G244200 Sobic003G190100--Sobic004G271600 Sobic007G185300 Sobic007G185300 Sobic003G190100--Sobic007G185300 Sobic007G133000 Sobic007G133000 Sobic003G190100--Sobic007G133000 Sobic003G190100--Sobic006G177900 Sobic005G179300 Sobic005G179300 Sobic003G190100--Sobic005G179300 Sobic001G250000 Sobic001G250000 Sobic006G177900--Sobic001G250000 Sobic002G044700 Sobic002G044700 Sobic006G177900--Sobic002G044700 Sobic006G177900--Sobic002G077400 Sobic006G177900--Sobic005G093800 Sobic006G025600 Sobic006G025600 Sobic006G177900--Sobic006G025600 Sobic004G252500 Sobic004G252500 Sobic006G177900--Sobic004G252500 Sobic006G276100 Sobic006G276100 Sobic006G177900--Sobic006G276100 Sobic006G177900--Sobic003G190100 Sobic004G165900 Sobic004G165900 Sobic006G177900--Sobic004G165900 Sobic002G132400 Sobic002G132400 Sobic004G271600--Sobic002G132400 Sobic002G081400 Sobic002G081400 Sobic004G271600--Sobic002G081400 Sobic010G100900 Sobic010G100900 Sobic004G271600--Sobic010G100900 Sobic002G351200 Sobic002G351200 Sobic004G271600--Sobic002G351200 Sobic007G124500 Sobic007G124500 Sobic004G271600--Sobic007G124500 Sobic002G072500 Sobic002G072500 Sobic004G271600--Sobic002G072500 Sobic006G090100 Sobic006G090100 Sobic004G271600--Sobic006G090100 Sobic001G509200 Sobic001G509200 Sobic004G271600--Sobic001G509200 Sobic002G060800 Sobic002G060800 Sobic004G271600--Sobic002G060800 Sobic002G173100--Sobic003G190100 Sobic003G108900 Sobic003G108900 Sobic002G173100--Sobic003G108900 Sobic003G203300 Sobic003G203300 Sobic002G173100--Sobic003G203300 Sobic001G060500 Sobic001G060500 Sobic002G173100--Sobic001G060500 Sobic003G190000 Sobic003G190000 Sobic002G173100--Sobic003G190000 Sobic005G075100 Sobic005G075100 Sobic002G173100--Sobic005G075100 Sobic002G173100--Sobic004G271600 Sobic002G173100--Sobic005G179300 Sobic004G300000 Sobic004G300000 Sobic002G173100--Sobic004G300000 Sobic002G077400--Sobic006G177900 Sobic001G009000 Sobic001G009000 Sobic002G077400--Sobic001G009000 Sobic002G077400--Sobic003G190100 Sobic002G077400--Sobic005G093800 Sobic007G149700 Sobic007G149700 Sobic002G077400--Sobic007G149700 Sobic010G271901 Sobic010G271901 Sobic002G077400--Sobic010G271901 Sobic002G077400--Sobic002G173100 Sobic002G077400--Sobic001G250000 Sobic010G178401 Sobic010G178401 Sobic002G077400--Sobic010G178401 Sobic010G121200--Sobic005G093800 Sobic010G121200--Sobic008G166550 Sobic010G223200 Sobic010G223200 Sobic010G121200--Sobic010G223200 Sobic008G101100 Sobic008G101100 Sobic010G121200--Sobic008G101100 Sobic010G145500 Sobic010G145500 Sobic010G121200--Sobic010G145500 Sobic002G171101 Sobic002G171101 Sobic010G121200--Sobic002G171101 Sobic002G431500 Sobic002G431500 Sobic010G121200--Sobic002G431500 Sobic010G121200--Sobic002G115050 Sobic010G272800 Sobic010G272800 Sobic010G121200--Sobic010G272800 Sobic002G115050--Sobic005G075100 Sobic010G141966 Sobic010G141966 Sobic002G115050--Sobic010G141966 Sobic002G115050--Sobic005G093800 Sobic002G115050--Sobic008G166550 Sobic002G097700 Sobic002G097700 Sobic002G115050--Sobic002G097700 Sobic002G115075 Sobic002G115075 Sobic002G115050--Sobic002G115075 Sobic004G038800 Sobic004G038800 Sobic002G115050--Sobic004G038800 Sobic004G181600 Sobic004G181600 Sobic002G115050--Sobic004G181600 Sobic003G127001 Sobic003G127001 Sobic002G115050--Sobic003G127001 Sobic008G166550--Sobic002G431500 Sobic007G202300 Sobic007G202300 Sobic008G166550--Sobic007G202300 Sobic008G166550--Sobic002G244200 Sobic003G416000 Sobic003G416000 Sobic008G166550--Sobic003G416000 Sobic008G166550--Sobic008G101100 Sobic005G095000 Sobic005G095000 Sobic008G166550--Sobic005G095000 Sobic002G017500 Sobic002G017500 Sobic008G166550--Sobic002G017500 Sobic008G166550--Sobic002G115050 Sobic008G166550--Sobic005G093800 Sobic003G080100 Sobic003G080100 Sobic001G492600--Sobic003G080100 Sobic006G036300 Sobic006G036300 Sobic001G492600--Sobic006G036300 Sobic001G492600--Sobic004G271600 Sobic003G012400 Sobic003G012400 Sobic001G492600--Sobic003G012400 Sobic001G492600--Sobic002G132400 Sobic006G120301 Sobic006G120301 Sobic001G492600--Sobic006G120301 Sobic002G213400 Sobic002G213400 Sobic001G492600--Sobic002G213400 Sobic001G492600--Sobic002G351200 Sobic001G492600--Sobic005G093800
Octagon: transcription factors


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