Gene annotation
Transcriptome id Sobic.002G244200.1
Synonym
Functional annotation nucleolar GTP-binding protein 1, putative, expressed
UniProt A0A1W0W5J2
Pfam PF06858 PF08155
Panther DB PTHR11702 PTHR11702:SF4
NCBI CDD KOG1490; GTP-binding protein CRFG/NOG1 (ODN superfamily)
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT1G50920 : Nucleolar GTP-binding protein
RAP-DB (Rice) LOC_Os07g01920.1 : nucleolar GTP-binding protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a042442 , Zm00025a049676
Brachypodium KQK19153 , KQK19152
Barley HORVU7Hr1G033470.2 , HORVU7Hr1G033470.3 , HORVU7Hr1G033470.1
Wheat TraesCS7D02G160700 , TraesCS7A02G160000 , TraesCS5B02G336400 , TraesCS5A02G337600 , TraesCS5D02G342200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G248801 - -
2 Sobic.005G095000 -(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
3 Sobic.008G166550 - -
4 Sobic.007G090403 - -
5 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
6 Sobic.003G160100 - -
7 Sobic.004G086150 - -
8 Sobic.007G202300 expressed protein -
9 Sobic.003G416000 - -
10 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
11 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
12 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
13 Sobic.007G185300 - -
14 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
15 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
16 Sobic.002G017500 expressed protein -
17 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
18 Sobic.003G080700 Ser/Thr protein kinase, putative, expressed -
19 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
20 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G244200 Sobic002G244200 Sobic009G248801 Sobic009G248801 Sobic002G244200--Sobic009G248801 Sobic005G095000 Sobic005G095000 Sobic002G244200--Sobic005G095000 Sobic008G166550 Sobic008G166550 Sobic002G244200--Sobic008G166550 Sobic007G090403 Sobic007G090403 Sobic002G244200--Sobic007G090403 Sobic007G133000 Sobic007G133000 Sobic002G244200--Sobic007G133000 Sobic003G160100 Sobic003G160100 Sobic002G244200--Sobic003G160100 Sobic004G086150 Sobic004G086150 Sobic002G244200--Sobic004G086150 Sobic007G202300 Sobic007G202300 Sobic002G244200--Sobic007G202300 Sobic003G416000 Sobic003G416000 Sobic002G244200--Sobic003G416000 Sobic009G248801--Sobic004G086150 Sobic009G248801--Sobic002G244200 Sobic009G248801--Sobic003G160100 Sobic009G248801--Sobic005G095000 Sobic009G248801--Sobic007G202300 Sobic005G133600 Sobic005G133600 Sobic009G248801--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic009G248801--Sobic008G101100 Sobic009G248801--Sobic007G090403 Sobic009G248801--Sobic008G166550 Sobic009G194500 Sobic009G194500 Sobic005G095000--Sobic009G194500 Sobic010G131700 Sobic010G131700 Sobic005G095000--Sobic010G131700 Sobic005G095000--Sobic003G160100 Sobic002G119100 Sobic002G119100 Sobic005G095000--Sobic002G119100 Sobic006G235300 Sobic006G235300 Sobic005G095000--Sobic006G235300 Sobic005G095000--Sobic002G244200 Sobic004G127800 Sobic004G127800 Sobic005G095000--Sobic004G127800 Sobic009G100700 Sobic009G100700 Sobic005G095000--Sobic009G100700 Sobic005G095000--Sobic004G086150 Sobic002G431500 Sobic002G431500 Sobic008G166550--Sobic002G431500 Sobic008G166550--Sobic007G202300 Sobic008G166550--Sobic002G244200 Sobic008G166550--Sobic003G416000 Sobic008G166550--Sobic008G101100 Sobic008G166550--Sobic005G095000 Sobic002G017500 Sobic002G017500 Sobic008G166550--Sobic002G017500 Sobic002G115050 Sobic002G115050 Sobic008G166550--Sobic002G115050 Sobic005G093800 Sobic005G093800 Sobic008G166550--Sobic005G093800 Sobic005G068700 Sobic005G068700 Sobic007G090403--Sobic005G068700 Sobic007G090403--Sobic002G244200 Sobic006G219600 Sobic006G219600 Sobic007G090403--Sobic006G219600 Sobic001G062900 Sobic001G062900 Sobic007G090403--Sobic001G062900 Sobic005G149200 Sobic005G149200 Sobic007G090403--Sobic005G149200 Sobic001G133000 Sobic001G133000 Sobic007G090403--Sobic001G133000 Sobic009G123900 Sobic009G123900 Sobic007G090403--Sobic009G123900 Sobic006G065100 Sobic006G065100 Sobic007G090403--Sobic006G065100 Sobic009G215500 Sobic009G215500 Sobic007G090403--Sobic009G215500 Sobic010G231300 Sobic010G231300 Sobic007G133000--Sobic010G231300 Sobic001G217900 Sobic001G217900 Sobic007G133000--Sobic001G217900 Sobic001G263100 Sobic001G263100 Sobic007G133000--Sobic001G263100 Sobic010G125833 Sobic010G125833 Sobic007G133000--Sobic010G125833 Sobic007G133000--Sobic005G068700 Sobic001G540600 Sobic001G540600 Sobic007G133000--Sobic001G540600 Sobic002G206300 Sobic002G206300 Sobic007G133000--Sobic002G206300 Sobic001G180200 Sobic001G180200 Sobic007G133000--Sobic001G180200 Sobic006G235400 Sobic006G235400 Sobic007G133000--Sobic006G235400 Sobic003G160100--Sobic005G095000 Sobic003G160100--Sobic004G086150 Sobic004G006800 Sobic004G006800 Sobic003G160100--Sobic004G006800 Sobic003G160100--Sobic009G248801 Sobic003G160100--Sobic002G244200 Sobic002G379750 Sobic002G379750 Sobic003G160100--Sobic002G379750 Sobic003G160100--Sobic007G090403 Sobic003G160100--Sobic005G133600 Sobic003G160100--Sobic007G133000 Sobic004G086150--Sobic009G248801 Sobic004G086150--Sobic003G160100 Sobic004G086150--Sobic002G244200 Sobic004G086150--Sobic005G095000 Sobic002G196600 Sobic002G196600 Sobic004G086150--Sobic002G196600 Sobic004G086150--Sobic005G068700 Sobic004G086150--Sobic009G123900 Sobic004G086150--Sobic007G090403 Sobic004G175400 Sobic004G175400 Sobic004G086150--Sobic004G175400 Sobic007G202300--Sobic008G166550 Sobic007G202300--Sobic002G244200 Sobic001G000300 Sobic001G000300 Sobic007G202300--Sobic001G000300 Sobic007G202300--Sobic009G248801 Sobic007G202300--Sobic008G101100 Sobic007G202300--Sobic002G017500 Sobic007G202300--Sobic003G416000 Sobic007G202300--Sobic005G093800 Sobic007G185300 Sobic007G185300 Sobic007G202300--Sobic007G185300 Sobic003G416000--Sobic002G017500 Sobic003G416000--Sobic008G101100 Sobic003G416000--Sobic008G166550 Sobic003G416000--Sobic002G244200 Sobic005G089400 Sobic005G089400 Sobic003G416000--Sobic005G089400 Sobic001G227900 Sobic001G227900 Sobic003G416000--Sobic001G227900 Sobic003G416000--Sobic007G202300 Sobic003G080700 Sobic003G080700 Sobic003G416000--Sobic003G080700 Sobic003G416000--Sobic005G133600
Octagon: transcription factors


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