Gene annotation
Transcriptome id Sobic.002G017500.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q8Q7
Pfam PF08224
Panther DB PTHR33377 PTHR33377:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02970.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G416000 - -
2 Sobic.003G080700 Ser/Thr protein kinase, putative, expressed -
3 Sobic.008G166550 - -
4 Sobic.002G244200 nucleolar GTP-binding protein 1, putative, expressed -
5 Sobic.008G101100 powdery mildew resistance protein PM3A, putative, expressed -
6 Sobic.007G202300 expressed protein -
7 Sobic.007G090403 - -
8 Sobic.003G160100 - -
9 Sobic.001G413000 ABC transporter family protein, putative, expressed -
10 Sobic.005G224800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
12 Sobic.009G248801 - -
13 Sobic.005G133600 - -
14 Sobic.008G084300 - -
15 Sobic.001G227900 -(PubMedID : 21930910)@-(PubMedID : 24884377)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
16 Sobic.001G223550 - -
17 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
18 Sobic.009G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
20 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -


Gene co-expression network
sample Sobic002G017500 Sobic002G017500 Sobic003G416000 Sobic003G416000 Sobic002G017500--Sobic003G416000 Sobic003G080700 Sobic003G080700 Sobic002G017500--Sobic003G080700 Sobic008G166550 Sobic008G166550 Sobic002G017500--Sobic008G166550 Sobic002G244200 Sobic002G244200 Sobic002G017500--Sobic002G244200 Sobic008G101100 Sobic008G101100 Sobic002G017500--Sobic008G101100 Sobic007G202300 Sobic007G202300 Sobic002G017500--Sobic007G202300 Sobic007G090403 Sobic007G090403 Sobic002G017500--Sobic007G090403 Sobic003G160100 Sobic003G160100 Sobic002G017500--Sobic003G160100 Sobic001G413000 Sobic001G413000 Sobic002G017500--Sobic001G413000 Sobic003G416000--Sobic002G017500 Sobic003G416000--Sobic008G101100 Sobic003G416000--Sobic008G166550 Sobic003G416000--Sobic002G244200 Sobic005G089400 Sobic005G089400 Sobic003G416000--Sobic005G089400 Sobic001G227900 Sobic001G227900 Sobic003G416000--Sobic001G227900 Sobic003G416000--Sobic007G202300 Sobic003G416000--Sobic003G080700 Sobic005G133600 Sobic005G133600 Sobic003G416000--Sobic005G133600 Sobic003G080700--Sobic002G017500 Sobic005G179300 Sobic005G179300 Sobic003G080700--Sobic005G179300 Sobic003G080700--Sobic001G413000 Sobic001G243200 Sobic001G243200 Sobic003G080700--Sobic001G243200 Sobic003G080700--Sobic002G244200 Sobic002G390500 Sobic002G390500 Sobic003G080700--Sobic002G390500 Sobic010G131700 Sobic010G131700 Sobic003G080700--Sobic010G131700 Sobic003G190100 Sobic003G190100 Sobic003G080700--Sobic003G190100 Sobic003G080700--Sobic003G416000 Sobic002G431500 Sobic002G431500 Sobic008G166550--Sobic002G431500 Sobic008G166550--Sobic007G202300 Sobic008G166550--Sobic002G244200 Sobic008G166550--Sobic003G416000 Sobic008G166550--Sobic008G101100 Sobic005G095000 Sobic005G095000 Sobic008G166550--Sobic005G095000 Sobic008G166550--Sobic002G017500 Sobic002G115050 Sobic002G115050 Sobic008G166550--Sobic002G115050 Sobic005G093800 Sobic005G093800 Sobic008G166550--Sobic005G093800 Sobic009G248801 Sobic009G248801 Sobic002G244200--Sobic009G248801 Sobic002G244200--Sobic005G095000 Sobic002G244200--Sobic008G166550 Sobic002G244200--Sobic007G090403 Sobic007G133000 Sobic007G133000 Sobic002G244200--Sobic007G133000 Sobic002G244200--Sobic003G160100 Sobic004G086150 Sobic004G086150 Sobic002G244200--Sobic004G086150 Sobic002G244200--Sobic007G202300 Sobic002G244200--Sobic003G416000 Sobic008G101100--Sobic003G416000 Sobic004G253700 Sobic004G253700 Sobic008G101100--Sobic004G253700 Sobic008G101100--Sobic008G166550 Sobic001G223550 Sobic001G223550 Sobic008G101100--Sobic001G223550 Sobic008G101100--Sobic007G202300 Sobic008G101100--Sobic009G248801 Sobic008G101100--Sobic005G133600 Sobic008G101100--Sobic005G089400 Sobic008G101100--Sobic002G017500 Sobic007G202300--Sobic008G166550 Sobic007G202300--Sobic002G244200 Sobic001G000300 Sobic001G000300 Sobic007G202300--Sobic001G000300 Sobic007G202300--Sobic009G248801 Sobic007G202300--Sobic008G101100 Sobic007G202300--Sobic002G017500 Sobic007G202300--Sobic003G416000 Sobic007G202300--Sobic005G093800 Sobic007G185300 Sobic007G185300 Sobic007G202300--Sobic007G185300 Sobic005G068700 Sobic005G068700 Sobic007G090403--Sobic005G068700 Sobic007G090403--Sobic002G244200 Sobic006G219600 Sobic006G219600 Sobic007G090403--Sobic006G219600 Sobic001G062900 Sobic001G062900 Sobic007G090403--Sobic001G062900 Sobic005G149200 Sobic005G149200 Sobic007G090403--Sobic005G149200 Sobic001G133000 Sobic001G133000 Sobic007G090403--Sobic001G133000 Sobic009G123900 Sobic009G123900 Sobic007G090403--Sobic009G123900 Sobic006G065100 Sobic006G065100 Sobic007G090403--Sobic006G065100 Sobic009G215500 Sobic009G215500 Sobic007G090403--Sobic009G215500 Sobic003G160100--Sobic005G095000 Sobic003G160100--Sobic004G086150 Sobic004G006800 Sobic004G006800 Sobic003G160100--Sobic004G006800 Sobic003G160100--Sobic009G248801 Sobic003G160100--Sobic002G244200 Sobic002G379750 Sobic002G379750 Sobic003G160100--Sobic002G379750 Sobic003G160100--Sobic007G090403 Sobic003G160100--Sobic005G133600 Sobic003G160100--Sobic007G133000 Sobic002G173100 Sobic002G173100 Sobic001G413000--Sobic002G173100 Sobic006G259600 Sobic006G259600 Sobic001G413000--Sobic006G259600 Sobic001G413000--Sobic001G243200 Sobic001G413000--Sobic007G090403 Sobic001G413000--Sobic003G080700 Sobic001G413000--Sobic005G179300 Sobic009G082000 Sobic009G082000 Sobic001G413000--Sobic009G082000 Sobic001G413000--Sobic003G160100 Sobic009G219100 Sobic009G219100 Sobic001G413000--Sobic009G219100
Octagon: transcription factors


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