Gene annotation
Transcriptome id Sobic.005G224800.2,Sobic.005G224800.3,Sobic.005G224800.1
Synonym MYB59, ATMYB59-2, Sb05g027370, ATMYB59-1, ATMYB59-3, ATMYB59
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt A0A1B6PU47 , C5Y8G9
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF484
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59780 : myb domain protein 59
RAP-DB (Rice) LOC_Os11g47460.3,LOC_Os11g47460.1,LOC_Os11g47460.4 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a002101 , Zm00025a029106 , Zm00025a052596
Brachypodium PNT65032 , KQJ91235
Barley HORVU5Hr1G021750.6 , HORVU5Hr1G021750.4 , HORVU5Hr1G021750.5 , HORVU5Hr1G021750.2 , HORVU5Hr1G021750.1
Wheat TraesCS5B02G089200 , TraesCS5B02G089200 , TraesCS4A02G173300 , TraesCS4A02G173300 , TraesCS4B02G186000 , TraesCS5A02G083100 , TraesCS5A02G083100 , TraesCS4D02G142300 , TraesCS5D02G095600 , TraesCS5D02G095600 , TraesCS2B02G467800 , TraesCS4B02G143700 , TraesCS4B02G143700
Populus PNT39349


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cDNA sequences
Sobic.005G224800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
2 Sobic.001G359300 cytochrome P450, putative, expressed -
3 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
4 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
5 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
6 Sobic.001G333800 MYB family transcription factor, putative, expressed -
7 Sobic.001G207800 integral membrane protein, putative, expressed -
8 Sobic.001G243200 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
9 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
10 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.003G166200 expressed protein -
12 Sobic.001G077300 thioredoxin, putative, expressed -
13 Sobic.005G179300 ABC transporter, ATP-binding protein, putative, expressed -
14 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
16 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
17 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.007G227100 expressed protein -
19 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
20 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -


Gene co-expression network
sample Sobic005G224800 Sobic005G224800 Sobic006G259600 Sobic006G259600 Sobic005G224800--Sobic006G259600 Sobic001G359300 Sobic001G359300 Sobic005G224800--Sobic001G359300 Sobic002G382700 Sobic002G382700 Sobic005G224800--Sobic002G382700 Sobic006G090100 Sobic006G090100 Sobic005G224800--Sobic006G090100 Sobic010G131700 Sobic010G131700 Sobic005G224800--Sobic010G131700 Sobic001G333800 Sobic001G333800 Sobic005G224800--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic005G224800--Sobic001G207800 Sobic001G243200 Sobic001G243200 Sobic005G224800--Sobic001G243200 Sobic010G275700 Sobic010G275700 Sobic005G224800--Sobic010G275700 Sobic006G259600--Sobic006G090100 Sobic006G259600--Sobic001G207800 Sobic003G166200 Sobic003G166200 Sobic006G259600--Sobic003G166200 Sobic002G081400 Sobic002G081400 Sobic006G259600--Sobic002G081400 Sobic006G212800 Sobic006G212800 Sobic006G259600--Sobic006G212800 Sobic009G073900 Sobic009G073900 Sobic006G259600--Sobic009G073900 Sobic001G509200 Sobic001G509200 Sobic006G259600--Sobic001G509200 Sobic006G259600--Sobic001G243200 Sobic001G077300 Sobic001G077300 Sobic006G259600--Sobic001G077300 Sobic001G359300--Sobic001G077300 Sobic001G258200 Sobic001G258200 Sobic001G359300--Sobic001G258200 Sobic009G093100 Sobic009G093100 Sobic001G359300--Sobic009G093100 Sobic001G359300--Sobic001G333800 Sobic001G359300--Sobic002G382700 Sobic001G359300--Sobic009G073900 Sobic003G073800 Sobic003G073800 Sobic001G359300--Sobic003G073800 Sobic001G359300--Sobic006G090100 Sobic005G068700 Sobic005G068700 Sobic001G359300--Sobic005G068700 Sobic002G382700--Sobic001G207800 Sobic002G382700--Sobic001G258200 Sobic002G382700--Sobic006G090100 Sobic003G341300 Sobic003G341300 Sobic002G382700--Sobic003G341300 Sobic001G283100 Sobic001G283100 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic006G090100--Sobic001G207800 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic006G090100--Sobic002G382700 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic006G090100--Sobic002G081400 Sobic002G293500 Sobic002G293500 Sobic010G131700--Sobic002G293500 Sobic004G127800 Sobic004G127800 Sobic010G131700--Sobic004G127800 Sobic005G095000 Sobic005G095000 Sobic010G131700--Sobic005G095000 Sobic008G038500 Sobic008G038500 Sobic010G131700--Sobic008G038500 Sobic002G119100 Sobic002G119100 Sobic010G131700--Sobic002G119100 Sobic010G131700--Sobic006G090100 Sobic010G131700--Sobic001G359300 Sobic010G131700--Sobic007G227100 Sobic009G194500 Sobic009G194500 Sobic010G131700--Sobic009G194500 Sobic001G333800--Sobic001G359300 Sobic005G106600 Sobic005G106600 Sobic001G333800--Sobic005G106600 Sobic001G333800--Sobic009G093100 Sobic001G333800--Sobic006G090100 Sobic001G303200 Sobic001G303200 Sobic001G333800--Sobic001G303200 Sobic003G220100 Sobic003G220100 Sobic001G333800--Sobic003G220100 Sobic009G038900 Sobic009G038900 Sobic001G333800--Sobic009G038900 Sobic001G333800--Sobic009G073900 Sobic001G333800--Sobic001G077300 Sobic001G207800--Sobic006G090100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G207800--Sobic001G509200 Sobic001G207800--Sobic001G077300 Sobic007G108900 Sobic007G108900 Sobic001G207800--Sobic007G108900 Sobic001G207800--Sobic009G073900 Sobic001G207800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic001G207800--Sobic007G157300 Sobic001G243200--Sobic009G093100 Sobic001G243200--Sobic006G259600 Sobic006G065100 Sobic006G065100 Sobic001G243200--Sobic006G065100 Sobic001G243200--Sobic001G333800 Sobic001G133000 Sobic001G133000 Sobic001G243200--Sobic001G133000 Sobic001G243200--Sobic003G166200 Sobic006G219600 Sobic006G219600 Sobic001G243200--Sobic006G219600 Sobic002G129400 Sobic002G129400 Sobic001G243200--Sobic002G129400 Sobic001G243200--Sobic001G077300 Sobic003G021100 Sobic003G021100 Sobic010G275700--Sobic003G021100 Sobic005G101200 Sobic005G101200 Sobic010G275700--Sobic005G101200 Sobic004G281800 Sobic004G281800 Sobic010G275700--Sobic004G281800 Sobic001G352400 Sobic001G352400 Sobic010G275700--Sobic001G352400 Sobic004G189800 Sobic004G189800 Sobic010G275700--Sobic004G189800 Sobic010G275700--Sobic002G382700 Sobic010G275700--Sobic001G333800 Sobic010G275700--Sobic002G119100 Sobic010G275700--Sobic009G038900
Octagon: transcription factors


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