Gene annotation
Transcriptome id Sobic.010G131700.1
Synonym Sb10g012160
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsCttP3 - Putative C-terminal processing peptidase homologue, expressed
UniProt C5Z1N2
Pfam PF13180 PF03572
Panther DB PTHR32060 PTHR32060:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0008236serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT3G57680 : Peptidase S41 family protein
RAP-DB (Rice) LOC_Os06g21380.1 : OsCttP3 - Putative C-terminal processing peptidase homologue, expressed
MaizeGDB (Corn) Zm00025a050606
Brachypodium KQK18472
Barley HORVU7Hr1G046050.1 , HORVU7Hr1G046050.2 , HORVU7Hr1G046040.1
Wheat TraesCS7A02G228300 , TraesCS7D02G226300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
2 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.005G095000 -(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
4 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
5 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
6 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
7 Sobic.001G359300 cytochrome P450, putative, expressed -
8 Sobic.007G227100 expressed protein -
9 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
11 Sobic.001G333800 MYB family transcription factor, putative, expressed -
12 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
13 Sobic.006G235300 expressed protein -
14 Sobic.001G077300 thioredoxin, putative, expressed -
15 Sobic.004G338000 PPCK(PubMedID : 19549309)@PEP carboxylase kinase(PubMedID : 20410319)@-(PubMedID : 26976818)@phosphorylation of leaf PEPC during C4 photosynthesis.(PubMedID : 16925599)@calcium-dependent protein kinase isoform AK1, putative, expressed -
16 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
17 Sobic.009G100700 - -
18 Sobic.001G207800 integral membrane protein, putative, expressed -
19 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.008G167600 VTC2, putative, expressed -


Gene co-expression network
sample Sobic010G131700 Sobic010G131700 Sobic002G293500 Sobic002G293500 Sobic010G131700--Sobic002G293500 Sobic004G127800 Sobic004G127800 Sobic010G131700--Sobic004G127800 Sobic005G095000 Sobic005G095000 Sobic010G131700--Sobic005G095000 Sobic008G038500 Sobic008G038500 Sobic010G131700--Sobic008G038500 Sobic002G119100 Sobic002G119100 Sobic010G131700--Sobic002G119100 Sobic006G090100 Sobic006G090100 Sobic010G131700--Sobic006G090100 Sobic001G359300 Sobic001G359300 Sobic010G131700--Sobic001G359300 Sobic007G227100 Sobic007G227100 Sobic010G131700--Sobic007G227100 Sobic009G194500 Sobic009G194500 Sobic010G131700--Sobic009G194500 Sobic004G153900 Sobic004G153900 Sobic002G293500--Sobic004G153900 Sobic001G046000 Sobic001G046000 Sobic002G293500--Sobic001G046000 Sobic002G161400 Sobic002G161400 Sobic002G293500--Sobic002G161400 Sobic001G331600 Sobic001G331600 Sobic002G293500--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic002G293500--Sobic004G312600 Sobic002G293500--Sobic004G127800 Sobic002G293500--Sobic007G227100 Sobic002G293500--Sobic010G131700 Sobic001G485100 Sobic001G485100 Sobic002G293500--Sobic001G485100 Sobic004G127800--Sobic007G227100 Sobic001G077300 Sobic001G077300 Sobic004G127800--Sobic001G077300 Sobic006G235300 Sobic006G235300 Sobic004G127800--Sobic006G235300 Sobic004G127800--Sobic004G312600 Sobic006G235400 Sobic006G235400 Sobic004G127800--Sobic006G235400 Sobic004G127800--Sobic006G090100 Sobic004G127800--Sobic001G331600 Sobic006G191500 Sobic006G191500 Sobic004G127800--Sobic006G191500 Sobic009G073900 Sobic009G073900 Sobic004G127800--Sobic009G073900 Sobic005G095000--Sobic009G194500 Sobic005G095000--Sobic010G131700 Sobic003G160100 Sobic003G160100 Sobic005G095000--Sobic003G160100 Sobic005G095000--Sobic002G119100 Sobic005G095000--Sobic006G235300 Sobic002G244200 Sobic002G244200 Sobic005G095000--Sobic002G244200 Sobic005G095000--Sobic004G127800 Sobic009G100700 Sobic009G100700 Sobic005G095000--Sobic009G100700 Sobic004G086150 Sobic004G086150 Sobic005G095000--Sobic004G086150 Sobic008G038500--Sobic004G312600 Sobic008G038500--Sobic007G227100 Sobic008G038500--Sobic009G194500 Sobic008G038500--Sobic002G119100 Sobic004G322600 Sobic004G322600 Sobic008G038500--Sobic004G322600 Sobic002G382700 Sobic002G382700 Sobic008G038500--Sobic002G382700 Sobic007G058100 Sobic007G058100 Sobic008G038500--Sobic007G058100 Sobic001G244600 Sobic001G244600 Sobic008G038500--Sobic001G244600 Sobic004G322700 Sobic004G322700 Sobic008G038500--Sobic004G322700 Sobic002G119100--Sobic009G194500 Sobic002G119100--Sobic004G322600 Sobic006G161500 Sobic006G161500 Sobic002G119100--Sobic006G161500 Sobic002G119100--Sobic008G038500 Sobic002G119100--Sobic004G127800 Sobic002G119100--Sobic001G244600 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G119100--Sobic002G293500 Sobic001G207800 Sobic001G207800 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic006G090100--Sobic002G382700 Sobic003G341300 Sobic003G341300 Sobic006G090100--Sobic003G341300 Sobic006G090100--Sobic001G046000 Sobic002G081400 Sobic002G081400 Sobic006G090100--Sobic002G081400 Sobic001G359300--Sobic001G077300 Sobic001G258200 Sobic001G258200 Sobic001G359300--Sobic001G258200 Sobic009G093100 Sobic009G093100 Sobic001G359300--Sobic009G093100 Sobic001G333800 Sobic001G333800 Sobic001G359300--Sobic001G333800 Sobic001G359300--Sobic002G382700 Sobic001G359300--Sobic009G073900 Sobic003G073800 Sobic003G073800 Sobic001G359300--Sobic003G073800 Sobic001G359300--Sobic006G090100 Sobic005G068700 Sobic005G068700 Sobic001G359300--Sobic005G068700 Sobic007G227100--Sobic004G312600 Sobic007G227100--Sobic004G127800 Sobic007G227100--Sobic001G077300 Sobic007G227100--Sobic001G331600 Sobic007G227100--Sobic008G038500 Sobic007G227100--Sobic002G382700 Sobic007G227100--Sobic006G235400 Sobic007G227100--Sobic003G341300 Sobic007G227100--Sobic001G485100 Sobic009G194500--Sobic002G119100 Sobic009G194500--Sobic006G161500 Sobic010G231300 Sobic010G231300 Sobic009G194500--Sobic010G231300 Sobic009G194500--Sobic004G322600 Sobic009G194500--Sobic008G038500 Sobic003G314000 Sobic003G314000 Sobic009G194500--Sobic003G314000 Sobic007G140700 Sobic007G140700 Sobic009G194500--Sobic007G140700 Sobic009G194500--Sobic004G127800 Sobic009G194500--Sobic006G235400
Octagon: transcription factors


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