Gene annotation
Transcriptome id Sobic.009G100700.1
Synonym
Functional annotation -
UniProt A0A1B6P868
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
3 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -
4 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
5 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
6 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
7 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.005G095000 -(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
9 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
10 Sobic.007G227100 expressed protein -
11 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
12 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
13 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
14 Sobic.004G035100 UOS1, putative, expressed -
15 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
16 Sobic.006G235300 expressed protein -
17 Sobic.001G359300 cytochrome P450, putative, expressed -
18 Sobic.004G322700 - -
19 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
20 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -


Gene co-expression network
sample Sobic009G100700 Sobic009G100700 Sobic009G194500 Sobic009G194500 Sobic009G100700--Sobic009G194500 Sobic002G119100 Sobic002G119100 Sobic009G100700--Sobic002G119100 Sobic006G214300 Sobic006G214300 Sobic009G100700--Sobic006G214300 Sobic004G322600 Sobic004G322600 Sobic009G100700--Sobic004G322600 Sobic004G312600 Sobic004G312600 Sobic009G100700--Sobic004G312600 Sobic008G038500 Sobic008G038500 Sobic009G100700--Sobic008G038500 Sobic004G127800 Sobic004G127800 Sobic009G100700--Sobic004G127800 Sobic005G095000 Sobic005G095000 Sobic009G100700--Sobic005G095000 Sobic010G131700 Sobic010G131700 Sobic009G100700--Sobic010G131700 Sobic009G194500--Sobic002G119100 Sobic006G161500 Sobic006G161500 Sobic009G194500--Sobic006G161500 Sobic010G231300 Sobic010G231300 Sobic009G194500--Sobic010G231300 Sobic009G194500--Sobic004G322600 Sobic009G194500--Sobic008G038500 Sobic003G314000 Sobic003G314000 Sobic009G194500--Sobic003G314000 Sobic007G140700 Sobic007G140700 Sobic009G194500--Sobic007G140700 Sobic009G194500--Sobic004G127800 Sobic006G235400 Sobic006G235400 Sobic009G194500--Sobic006G235400 Sobic002G119100--Sobic009G194500 Sobic002G119100--Sobic004G322600 Sobic002G119100--Sobic006G161500 Sobic002G119100--Sobic008G038500 Sobic002G119100--Sobic004G127800 Sobic001G244600 Sobic001G244600 Sobic002G119100--Sobic001G244600 Sobic004G322700 Sobic004G322700 Sobic002G119100--Sobic004G322700 Sobic007G227100 Sobic007G227100 Sobic002G119100--Sobic007G227100 Sobic002G293500 Sobic002G293500 Sobic002G119100--Sobic002G293500 Sobic005G101200 Sobic005G101200 Sobic006G214300--Sobic005G101200 Sobic006G214300--Sobic001G244600 Sobic006G214300--Sobic009G194500 Sobic006G214300--Sobic003G314000 Sobic006G214300--Sobic002G119100 Sobic005G068700 Sobic005G068700 Sobic006G214300--Sobic005G068700 Sobic009G038900 Sobic009G038900 Sobic006G214300--Sobic009G038900 Sobic006G214300--Sobic004G322600 Sobic006G214300--Sobic009G100700 Sobic004G322600--Sobic004G322700 Sobic004G322600--Sobic002G119100 Sobic004G322600--Sobic006G161500 Sobic004G322600--Sobic009G194500 Sobic004G035100 Sobic004G035100 Sobic004G322600--Sobic004G035100 Sobic004G322600--Sobic008G038500 Sobic001G331600 Sobic001G331600 Sobic004G322600--Sobic001G331600 Sobic004G322600--Sobic007G227100 Sobic004G322600--Sobic001G244600 Sobic004G312600--Sobic007G227100 Sobic004G312600--Sobic004G127800 Sobic004G312600--Sobic008G038500 Sobic004G312600--Sobic001G331600 Sobic002G382700 Sobic002G382700 Sobic004G312600--Sobic002G382700 Sobic004G312600--Sobic002G293500 Sobic001G077300 Sobic001G077300 Sobic004G312600--Sobic001G077300 Sobic005G106600 Sobic005G106600 Sobic004G312600--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic004G312600--Sobic003G220100 Sobic008G038500--Sobic004G312600 Sobic008G038500--Sobic007G227100 Sobic008G038500--Sobic009G194500 Sobic008G038500--Sobic002G119100 Sobic008G038500--Sobic004G322600 Sobic008G038500--Sobic002G382700 Sobic007G058100 Sobic007G058100 Sobic008G038500--Sobic007G058100 Sobic008G038500--Sobic001G244600 Sobic008G038500--Sobic004G322700 Sobic004G127800--Sobic007G227100 Sobic004G127800--Sobic001G077300 Sobic006G235300 Sobic006G235300 Sobic004G127800--Sobic006G235300 Sobic004G127800--Sobic004G312600 Sobic004G127800--Sobic006G235400 Sobic006G090100 Sobic006G090100 Sobic004G127800--Sobic006G090100 Sobic004G127800--Sobic001G331600 Sobic006G191500 Sobic006G191500 Sobic004G127800--Sobic006G191500 Sobic009G073900 Sobic009G073900 Sobic004G127800--Sobic009G073900 Sobic005G095000--Sobic009G194500 Sobic005G095000--Sobic010G131700 Sobic003G160100 Sobic003G160100 Sobic005G095000--Sobic003G160100 Sobic005G095000--Sobic002G119100 Sobic005G095000--Sobic006G235300 Sobic002G244200 Sobic002G244200 Sobic005G095000--Sobic002G244200 Sobic005G095000--Sobic004G127800 Sobic005G095000--Sobic009G100700 Sobic004G086150 Sobic004G086150 Sobic005G095000--Sobic004G086150 Sobic010G131700--Sobic002G293500 Sobic010G131700--Sobic004G127800 Sobic010G131700--Sobic005G095000 Sobic010G131700--Sobic008G038500 Sobic010G131700--Sobic002G119100 Sobic010G131700--Sobic006G090100 Sobic001G359300 Sobic001G359300 Sobic010G131700--Sobic001G359300 Sobic010G131700--Sobic007G227100 Sobic010G131700--Sobic009G194500
Octagon: transcription factors


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