Gene annotation
Transcriptome id Sobic.004G322600.1
Synonym Sb04g035290
Functional annotation Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (PubMedID : 26465154)
protein kinase domain containing protein, expressed
UniProt A0A194YST5
Pfam PF00564 PF07714
Panther DB PTHR23257 PTHR23257:SF331
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G57610 : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
RAP-DB (Rice) LOC_Os02g54510.2 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032984 , Zm00025a022386
Brachypodium KQK02075 , KQK02076
Barley HORVU6Hr1G083270.14 , HORVU6Hr1G083270.15 , HORVU6Hr1G083270.16 , HORVU6Hr1G083270.17 , HORVU6Hr1G083270.10 , HORVU6Hr1G083270.11 , HORVU6Hr1G083270.12 , HORVU6Hr1G083270.13 , HORVU6Hr1G083270.8 , HORVU6Hr1G083270.9 , HORVU6Hr1G083270.6 , HORVU6Hr1G083270.7 , HORVU6Hr1G083270.4 , HORVU6Hr1G083270.5 , HORVU6Hr1G083270.2 , HORVU6Hr1G083270.3 , HORVU6Hr1G083270.1
Wheat TraesCS6D02G327400 , TraesCS6D02G327400 , TraesCS6B02G377500 , TraesCS6B02G377500 , TraesCS6B02G377500 , TraesCS6A02G344800 , TraesCS6A02G344800 , TraesCS6A02G344800 , TraesCS6A02G344800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G322700 - -
2 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
3 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
4 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G035100 UOS1, putative, expressed -
6 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
7 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
8 Sobic.007G227100 expressed protein -
9 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
10 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
11 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
13 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
14 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
15 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
16 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
17 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
18 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -


Gene co-expression network
sample Sobic004G322600 Sobic004G322600 Sobic004G322700 Sobic004G322700 Sobic004G322600--Sobic004G322700 Sobic002G119100 Sobic002G119100 Sobic004G322600--Sobic002G119100 Sobic006G161500 Sobic006G161500 Sobic004G322600--Sobic006G161500 Sobic009G194500 Sobic009G194500 Sobic004G322600--Sobic009G194500 Sobic004G035100 Sobic004G035100 Sobic004G322600--Sobic004G035100 Sobic008G038500 Sobic008G038500 Sobic004G322600--Sobic008G038500 Sobic001G331600 Sobic001G331600 Sobic004G322600--Sobic001G331600 Sobic007G227100 Sobic007G227100 Sobic004G322600--Sobic007G227100 Sobic001G244600 Sobic001G244600 Sobic004G322600--Sobic001G244600 Sobic004G322700--Sobic004G322600 Sobic002G382700 Sobic002G382700 Sobic004G322700--Sobic002G382700 Sobic004G322700--Sobic008G038500 Sobic004G322700--Sobic002G119100 Sobic004G322700--Sobic001G244600 Sobic004G322700--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic004G322700--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic004G322700--Sobic007G058100 Sobic004G322700--Sobic007G227100 Sobic002G119100--Sobic009G194500 Sobic002G119100--Sobic004G322600 Sobic002G119100--Sobic006G161500 Sobic002G119100--Sobic008G038500 Sobic004G127800 Sobic004G127800 Sobic002G119100--Sobic004G127800 Sobic002G119100--Sobic001G244600 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G293500 Sobic002G293500 Sobic002G119100--Sobic002G293500 Sobic004G128900 Sobic004G128900 Sobic006G161500--Sobic004G128900 Sobic010G231300 Sobic010G231300 Sobic006G161500--Sobic010G231300 Sobic003G409700 Sobic003G409700 Sobic006G161500--Sobic003G409700 Sobic006G235400 Sobic006G235400 Sobic006G161500--Sobic006G235400 Sobic006G161500--Sobic004G322600 Sobic006G161500--Sobic004G035100 Sobic001G073300 Sobic001G073300 Sobic006G161500--Sobic001G073300 Sobic006G161500--Sobic002G119100 Sobic006G161500--Sobic009G194500 Sobic009G194500--Sobic002G119100 Sobic009G194500--Sobic006G161500 Sobic009G194500--Sobic010G231300 Sobic009G194500--Sobic004G322600 Sobic009G194500--Sobic008G038500 Sobic003G314000 Sobic003G314000 Sobic009G194500--Sobic003G314000 Sobic007G140700 Sobic007G140700 Sobic009G194500--Sobic007G140700 Sobic009G194500--Sobic004G127800 Sobic009G194500--Sobic006G235400 Sobic004G035100--Sobic006G161500 Sobic003G340300 Sobic003G340300 Sobic004G035100--Sobic003G340300 Sobic002G161400 Sobic002G161400 Sobic004G035100--Sobic002G161400 Sobic004G035100--Sobic004G322600 Sobic004G035100--Sobic004G128900 Sobic003G339200 Sobic003G339200 Sobic004G035100--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic004G035100--Sobic004G344600 Sobic007G065600 Sobic007G065600 Sobic004G035100--Sobic007G065600 Sobic006G191500 Sobic006G191500 Sobic004G035100--Sobic006G191500 Sobic008G038500--Sobic004G312600 Sobic008G038500--Sobic007G227100 Sobic008G038500--Sobic009G194500 Sobic008G038500--Sobic002G119100 Sobic008G038500--Sobic004G322600 Sobic008G038500--Sobic002G382700 Sobic008G038500--Sobic007G058100 Sobic008G038500--Sobic001G244600 Sobic008G038500--Sobic004G322700 Sobic001G485100 Sobic001G485100 Sobic001G331600--Sobic001G485100 Sobic001G331600--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic001G331600--Sobic004G153900 Sobic001G331600--Sobic002G161400 Sobic001G046000 Sobic001G046000 Sobic001G331600--Sobic001G046000 Sobic001G331600--Sobic004G312600 Sobic001G331600--Sobic007G227100 Sobic001G331600--Sobic006G191500 Sobic001G331600--Sobic004G344600 Sobic007G227100--Sobic004G312600 Sobic007G227100--Sobic004G127800 Sobic001G077300 Sobic001G077300 Sobic007G227100--Sobic001G077300 Sobic007G227100--Sobic001G331600 Sobic007G227100--Sobic008G038500 Sobic007G227100--Sobic002G382700 Sobic007G227100--Sobic006G235400 Sobic003G341300 Sobic003G341300 Sobic007G227100--Sobic003G341300 Sobic007G227100--Sobic001G485100 Sobic008G129900 Sobic008G129900 Sobic001G244600--Sobic008G129900 Sobic010G104800 Sobic010G104800 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic009G256100 Sobic009G256100 Sobic001G244600--Sobic009G256100 Sobic001G244600--Sobic001G073300 Sobic001G244600--Sobic007G058100 Sobic001G217900 Sobic001G217900 Sobic001G244600--Sobic001G217900 Sobic001G244600--Sobic008G038500 Sobic001G244600--Sobic010G231300
Octagon: transcription factors


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