Gene annotation
Transcriptome id Sobic.004G322700.1
Synonym
Functional annotation -
UniProt A0A194YSS3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
2 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
3 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
4 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
5 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
6 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
7 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
8 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
9 Sobic.007G227100 expressed protein -
10 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
11 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
14 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
16 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
17 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
19 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G322700 Sobic004G322700 Sobic004G322600 Sobic004G322600 Sobic004G322700--Sobic004G322600 Sobic002G382700 Sobic002G382700 Sobic004G322700--Sobic002G382700 Sobic008G038500 Sobic008G038500 Sobic004G322700--Sobic008G038500 Sobic002G119100 Sobic002G119100 Sobic004G322700--Sobic002G119100 Sobic001G244600 Sobic001G244600 Sobic004G322700--Sobic001G244600 Sobic001G331600 Sobic001G331600 Sobic004G322700--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic004G322700--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic004G322700--Sobic007G058100 Sobic007G227100 Sobic007G227100 Sobic004G322700--Sobic007G227100 Sobic004G322600--Sobic004G322700 Sobic004G322600--Sobic002G119100 Sobic006G161500 Sobic006G161500 Sobic004G322600--Sobic006G161500 Sobic009G194500 Sobic009G194500 Sobic004G322600--Sobic009G194500 Sobic004G035100 Sobic004G035100 Sobic004G322600--Sobic004G035100 Sobic004G322600--Sobic008G038500 Sobic004G322600--Sobic001G331600 Sobic004G322600--Sobic007G227100 Sobic004G322600--Sobic001G244600 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic001G258200 Sobic001G258200 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic003G341300 Sobic003G341300 Sobic002G382700--Sobic003G341300 Sobic001G283100 Sobic001G283100 Sobic002G382700--Sobic001G283100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic002G382700--Sobic007G227100 Sobic008G038500--Sobic004G312600 Sobic008G038500--Sobic007G227100 Sobic008G038500--Sobic009G194500 Sobic008G038500--Sobic002G119100 Sobic008G038500--Sobic004G322600 Sobic008G038500--Sobic002G382700 Sobic008G038500--Sobic007G058100 Sobic008G038500--Sobic001G244600 Sobic008G038500--Sobic004G322700 Sobic002G119100--Sobic009G194500 Sobic002G119100--Sobic004G322600 Sobic002G119100--Sobic006G161500 Sobic002G119100--Sobic008G038500 Sobic004G127800 Sobic004G127800 Sobic002G119100--Sobic004G127800 Sobic002G119100--Sobic001G244600 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G293500 Sobic002G293500 Sobic002G119100--Sobic002G293500 Sobic008G129900 Sobic008G129900 Sobic001G244600--Sobic008G129900 Sobic010G104800 Sobic010G104800 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic009G256100 Sobic009G256100 Sobic001G244600--Sobic009G256100 Sobic001G073300 Sobic001G073300 Sobic001G244600--Sobic001G073300 Sobic001G244600--Sobic007G058100 Sobic001G217900 Sobic001G217900 Sobic001G244600--Sobic001G217900 Sobic001G244600--Sobic008G038500 Sobic010G231300 Sobic010G231300 Sobic001G244600--Sobic010G231300 Sobic001G485100 Sobic001G485100 Sobic001G331600--Sobic001G485100 Sobic004G128900 Sobic004G128900 Sobic001G331600--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic001G331600--Sobic004G153900 Sobic002G161400 Sobic002G161400 Sobic001G331600--Sobic002G161400 Sobic001G046000 Sobic001G046000 Sobic001G331600--Sobic001G046000 Sobic001G331600--Sobic004G312600 Sobic001G331600--Sobic007G227100 Sobic006G191500 Sobic006G191500 Sobic001G331600--Sobic006G191500 Sobic004G344600 Sobic004G344600 Sobic001G331600--Sobic004G344600 Sobic004G312600--Sobic007G227100 Sobic004G312600--Sobic004G127800 Sobic004G312600--Sobic008G038500 Sobic004G312600--Sobic001G331600 Sobic004G312600--Sobic002G382700 Sobic004G312600--Sobic002G293500 Sobic004G312600--Sobic001G077300 Sobic005G106600 Sobic005G106600 Sobic004G312600--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic004G312600--Sobic003G220100 Sobic001G263100 Sobic001G263100 Sobic007G058100--Sobic001G263100 Sobic007G058100--Sobic001G217900 Sobic004G082300 Sobic004G082300 Sobic007G058100--Sobic004G082300 Sobic007G058100--Sobic001G258200 Sobic007G058100--Sobic003G341300 Sobic007G058100--Sobic008G129900 Sobic004G143300 Sobic004G143300 Sobic007G058100--Sobic004G143300 Sobic007G058100--Sobic009G256100 Sobic001G345100 Sobic001G345100 Sobic007G058100--Sobic001G345100 Sobic007G227100--Sobic004G312600 Sobic007G227100--Sobic004G127800 Sobic007G227100--Sobic001G077300 Sobic007G227100--Sobic001G331600 Sobic007G227100--Sobic008G038500 Sobic007G227100--Sobic002G382700 Sobic006G235400 Sobic006G235400 Sobic007G227100--Sobic006G235400 Sobic007G227100--Sobic003G341300 Sobic007G227100--Sobic001G485100
Octagon: transcription factors


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