Gene annotation
Transcriptome id Sobic.009G246300.1,Sobic.009G246300.2
Synonym MPK20, Sb09g029720, ATMPK20
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5YWG6 , A0A1B6PB22
Pfam PF06293
Panther DB PTHR24055 PTHR24055:SF158
NCBI CDD -
KEGG Orthology K04371; ERK, mitogen-activated protein kinase 1/3
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0016020membrane GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT2G42880 : MAP kinase 20
RAP-DB (Rice) LOC_Os01g43910.1 : CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a002389 , Zm00025a036716 , Zm00025a023665 , Zm00025a017747 , Zm00025a000489 , Zm00025a044719 , Zm00025a038623
Brachypodium KQK04693 , KQK04694 , KQK04695 , KQK08860 , KQK08859 , PNT75923
Barley HORVU1Hr1G091890.8 , HORVU1Hr1G091890.9 , HORVU1Hr1G091890.2 , HORVU1Hr1G091890.3 , HORVU1Hr1G091890.1 , HORVU1Hr1G091890.6 , HORVU1Hr1G091890.7 , HORVU1Hr1G091890.4 , HORVU1Hr1G091890.5 , HORVU1Hr1G091890.10 , HORVU1Hr1G091890.12
Wheat TraesCS1A02G421000 , TraesCS1B02G452200 , TraesCS1D02G428900
Populus -


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cDNA sequences
Sobic.009G246300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G322700 - -
2 Sobic.001G221800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
3 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
4 Sobic.003G277600 DNAse I-like superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
6 Sobic.009G016000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
7 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
8 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
9 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
10 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
11 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
12 Sobic.003G350800 SLT1 protein, putative, expressed -
13 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
14 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.004G151800 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
16 Sobic.003G355200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
17 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
18 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
19 Sobic.001G043000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
20 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic009G246300 Sobic009G246300 Sobic004G322700 Sobic004G322700 Sobic009G246300--Sobic004G322700 Sobic001G221800 Sobic001G221800 Sobic009G246300--Sobic001G221800 Sobic003G139500 Sobic003G139500 Sobic009G246300--Sobic003G139500 Sobic003G277600 Sobic003G277600 Sobic009G246300--Sobic003G277600 Sobic004G322600 Sobic004G322600 Sobic009G246300--Sobic004G322600 Sobic009G016000 Sobic009G016000 Sobic009G246300--Sobic009G016000 Sobic001G073300 Sobic001G073300 Sobic009G246300--Sobic001G073300 Sobic001G244600 Sobic001G244600 Sobic009G246300--Sobic001G244600 Sobic001G244700 Sobic001G244700 Sobic009G246300--Sobic001G244700 Sobic004G322700--Sobic004G322600 Sobic002G382700 Sobic002G382700 Sobic004G322700--Sobic002G382700 Sobic008G038500 Sobic008G038500 Sobic004G322700--Sobic008G038500 Sobic002G119100 Sobic002G119100 Sobic004G322700--Sobic002G119100 Sobic004G322700--Sobic001G244600 Sobic001G331600 Sobic001G331600 Sobic004G322700--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic004G322700--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic004G322700--Sobic007G058100 Sobic007G227100 Sobic007G227100 Sobic004G322700--Sobic007G227100 Sobic003G355200 Sobic003G355200 Sobic001G221800--Sobic003G355200 Sobic001G221800--Sobic009G246300 Sobic001G221800--Sobic001G244700 Sobic001G221800--Sobic004G322700 Sobic006G214300 Sobic006G214300 Sobic001G221800--Sobic006G214300 Sobic010G059000 Sobic010G059000 Sobic001G221800--Sobic010G059000 Sobic003G282000 Sobic003G282000 Sobic001G221800--Sobic003G282000 Sobic001G221800--Sobic004G322600 Sobic001G221800--Sobic003G139500 Sobic001G263100 Sobic001G263100 Sobic003G139500--Sobic001G263100 Sobic003G139500--Sobic004G322700 Sobic006G161500 Sobic006G161500 Sobic003G139500--Sobic006G161500 Sobic003G139500--Sobic004G322600 Sobic010G104800 Sobic010G104800 Sobic003G139500--Sobic010G104800 Sobic002G162400 Sobic002G162400 Sobic003G139500--Sobic002G162400 Sobic003G139500--Sobic008G038500 Sobic003G139500--Sobic001G331600 Sobic001G043000 Sobic001G043000 Sobic003G139500--Sobic001G043000 Sobic003G372400 Sobic003G372400 Sobic003G277600--Sobic003G372400 Sobic003G277600--Sobic009G246300 Sobic004G165500 Sobic004G165500 Sobic003G277600--Sobic004G165500 Sobic003G277600--Sobic010G104800 Sobic009G048900 Sobic009G048900 Sobic003G277600--Sobic009G048900 Sobic004G112100 Sobic004G112100 Sobic003G277600--Sobic004G112100 Sobic003G277600--Sobic003G139500 Sobic003G277600--Sobic001G043000 Sobic003G042900 Sobic003G042900 Sobic003G277600--Sobic003G042900 Sobic004G322600--Sobic004G322700 Sobic004G322600--Sobic002G119100 Sobic004G322600--Sobic006G161500 Sobic009G194500 Sobic009G194500 Sobic004G322600--Sobic009G194500 Sobic004G035100 Sobic004G035100 Sobic004G322600--Sobic004G035100 Sobic004G322600--Sobic008G038500 Sobic004G322600--Sobic001G331600 Sobic004G322600--Sobic007G227100 Sobic004G322600--Sobic001G244600 Sobic009G016000--Sobic003G139500 Sobic009G016000--Sobic009G246300 Sobic010G183600 Sobic010G183600 Sobic009G016000--Sobic010G183600 Sobic008G180800 Sobic008G180800 Sobic009G016000--Sobic008G180800 Sobic009G016000--Sobic001G043000 Sobic007G121300 Sobic007G121300 Sobic009G016000--Sobic007G121300 Sobic003G428600 Sobic003G428600 Sobic009G016000--Sobic003G428600 Sobic009G016000--Sobic001G331600 Sobic010G104700 Sobic010G104700 Sobic009G016000--Sobic010G104700 Sobic001G073300--Sobic010G104800 Sobic001G073300--Sobic006G161500 Sobic009G256100 Sobic009G256100 Sobic001G073300--Sobic009G256100 Sobic001G073300--Sobic001G244600 Sobic003G409700 Sobic003G409700 Sobic001G073300--Sobic003G409700 Sobic002G390100 Sobic002G390100 Sobic001G073300--Sobic002G390100 Sobic010G231300 Sobic010G231300 Sobic001G073300--Sobic010G231300 Sobic001G073300--Sobic003G042900 Sobic008G129900 Sobic008G129900 Sobic001G073300--Sobic008G129900 Sobic001G244600--Sobic008G129900 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic001G244600--Sobic009G256100 Sobic001G244600--Sobic001G073300 Sobic001G244600--Sobic007G058100 Sobic001G217900 Sobic001G217900 Sobic001G244600--Sobic001G217900 Sobic001G244600--Sobic008G038500 Sobic001G244600--Sobic010G231300 Sobic002G404800 Sobic002G404800 Sobic001G244700--Sobic002G404800 Sobic002G196600 Sobic002G196600 Sobic001G244700--Sobic002G196600 Sobic009G038900 Sobic009G038900 Sobic001G244700--Sobic009G038900 Sobic001G244700--Sobic001G244600 Sobic001G244700--Sobic001G217900 Sobic010G085100 Sobic010G085100 Sobic001G244700--Sobic010G085100 Sobic006G259800 Sobic006G259800 Sobic001G244700--Sobic006G259800 Sobic003G260100 Sobic003G260100 Sobic001G244700--Sobic003G260100 Sobic008G033000 Sobic008G033000 Sobic001G244700--Sobic008G033000
Octagon: transcription factors


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