Gene annotation
Transcriptome id Sobic.003G139500.1
Synonym Sb03g011880, SbCIPK21,SORBI_3003G139500 , SORBIDRAFT_03g011880;CBL-interacting protein kinases, CIPK1, SnRK3.16
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CDPK - CBL-interacting protein kinase 1 (PubMedID : 31721651)
Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7T1
Pfam PF03822 PF00069
Panther DB PTHR24343 PTHR24343:SF143
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology GO:0007165; signal transduction GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G17510 : CBL-interacting protein kinase 1
RAP-DB (Rice) LOC_Os01g18800.1 : CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a024232
Brachypodium KQK04016 , KQK04017 , KQK04018
Barley HORVU1Hr1G017240.10 , HORVU1Hr1G017380.5 , HORVU1Hr1G017380.8 , HORVU1Hr1G017380.9 , HORVU2Hr1G031200.18 , HORVU2Hr1G031200.19 , HORVU2Hr1G031200.10 , HORVU2Hr1G031200.11 , HORVU2Hr1G031200.12 , HORVU2Hr1G031200.14 , HORVU2Hr1G031200.15 , HORVU2Hr1G031200.16 , HORVU2Hr1G031200.17 , HORVU2Hr1G031200.13 , HORVU1Hr1G017380.1 , HORVU1Hr1G017380.2 , HORVU1Hr1G017380.3 , HORVU1Hr1G017380.4 , HORVU1Hr1G017380.6 , HORVU1Hr1G017380.7 , HORVU2Hr1G031200.8 , HORVU2Hr1G031200.9 , HORVU2Hr1G031200.2 , HORVU2Hr1G031200.3 , HORVU2Hr1G031200.1 , HORVU2Hr1G031200.6 , HORVU2Hr1G031200.7 , HORVU2Hr1G031200.4 , HORVU2Hr1G031200.5 , HORVU1Hr1G017240.1 , HORVU1Hr1G017240.3 , HORVU1Hr1G017240.2 , HORVU1Hr1G017240.5 , HORVU1Hr1G017240.4 , HORVU1Hr1G017240.7 , HORVU1Hr1G017240.6 , HORVU1Hr1G017240.9 , HORVU1Hr1G017240.8
Wheat TraesCS1D02G082500 , TraesCS1D02G082500 , TraesCS1D02G082500 , TraesCS1A02G080500 , TraesCS1D02G082600 , TraesCS1D02G082600 , TraesCS1D02G082200 , TraesCS1A02G080700 , TraesCS1B02G098700 , TraesCS1B02G098700 , TraesCS1A02G080500 , TraesCS1B02G098600 , TraesCS1A02G080600
Populus -


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cDNA sequences
Sobic.003G139500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
2 Sobic.004G322700 - -
3 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
4 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
5 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
6 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
7 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
8 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
9 Sobic.001G043000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
10 Sobic.006G153400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, AFG1 family domain containing protein, expressed -
11 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
12 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
13 Sobic.009G016000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
14 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
15 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -
16 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G355200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
18 Sobic.003G282000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@suppressor of phythchrome A, putative, expressed -
19 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
20 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G139500 Sobic003G139500 Sobic001G263100 Sobic001G263100 Sobic003G139500--Sobic001G263100 Sobic004G322700 Sobic004G322700 Sobic003G139500--Sobic004G322700 Sobic006G161500 Sobic006G161500 Sobic003G139500--Sobic006G161500 Sobic004G322600 Sobic004G322600 Sobic003G139500--Sobic004G322600 Sobic010G104800 Sobic010G104800 Sobic003G139500--Sobic010G104800 Sobic002G162400 Sobic002G162400 Sobic003G139500--Sobic002G162400 Sobic008G038500 Sobic008G038500 Sobic003G139500--Sobic008G038500 Sobic001G331600 Sobic001G331600 Sobic003G139500--Sobic001G331600 Sobic001G043000 Sobic001G043000 Sobic003G139500--Sobic001G043000 Sobic007G058100 Sobic007G058100 Sobic001G263100--Sobic007G058100 Sobic010G231300 Sobic010G231300 Sobic001G263100--Sobic010G231300 Sobic008G129900 Sobic008G129900 Sobic001G263100--Sobic008G129900 Sobic001G263100--Sobic002G162400 Sobic001G180200 Sobic001G180200 Sobic001G263100--Sobic001G180200 Sobic001G217900 Sobic001G217900 Sobic001G263100--Sobic001G217900 Sobic003G341300 Sobic003G341300 Sobic001G263100--Sobic003G341300 Sobic002G206300 Sobic002G206300 Sobic001G263100--Sobic002G206300 Sobic006G235400 Sobic006G235400 Sobic001G263100--Sobic006G235400 Sobic004G322700--Sobic004G322600 Sobic002G382700 Sobic002G382700 Sobic004G322700--Sobic002G382700 Sobic004G322700--Sobic008G038500 Sobic002G119100 Sobic002G119100 Sobic004G322700--Sobic002G119100 Sobic001G244600 Sobic001G244600 Sobic004G322700--Sobic001G244600 Sobic004G322700--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic004G322700--Sobic004G312600 Sobic004G322700--Sobic007G058100 Sobic007G227100 Sobic007G227100 Sobic004G322700--Sobic007G227100 Sobic004G128900 Sobic004G128900 Sobic006G161500--Sobic004G128900 Sobic006G161500--Sobic010G231300 Sobic003G409700 Sobic003G409700 Sobic006G161500--Sobic003G409700 Sobic006G161500--Sobic006G235400 Sobic006G161500--Sobic004G322600 Sobic004G035100 Sobic004G035100 Sobic006G161500--Sobic004G035100 Sobic001G073300 Sobic001G073300 Sobic006G161500--Sobic001G073300 Sobic006G161500--Sobic002G119100 Sobic009G194500 Sobic009G194500 Sobic006G161500--Sobic009G194500 Sobic004G322600--Sobic004G322700 Sobic004G322600--Sobic002G119100 Sobic004G322600--Sobic006G161500 Sobic004G322600--Sobic009G194500 Sobic004G322600--Sobic004G035100 Sobic004G322600--Sobic008G038500 Sobic004G322600--Sobic001G331600 Sobic004G322600--Sobic007G227100 Sobic004G322600--Sobic001G244600 Sobic010G104800--Sobic001G073300 Sobic006G153400 Sobic006G153400 Sobic010G104800--Sobic006G153400 Sobic009G256100 Sobic009G256100 Sobic010G104800--Sobic009G256100 Sobic007G006400 Sobic007G006400 Sobic010G104800--Sobic007G006400 Sobic010G104800--Sobic008G129900 Sobic004G112100 Sobic004G112100 Sobic010G104800--Sobic004G112100 Sobic010G104800--Sobic001G244600 Sobic010G104800--Sobic006G161500 Sobic002G390100 Sobic002G390100 Sobic010G104800--Sobic002G390100 Sobic002G162400--Sobic003G341300 Sobic002G162400--Sobic001G263100 Sobic002G162400--Sobic001G180200 Sobic002G162400--Sobic002G206300 Sobic002G162400--Sobic010G231300 Sobic002G162400--Sobic006G235400 Sobic001G077300 Sobic001G077300 Sobic002G162400--Sobic001G077300 Sobic001G258200 Sobic001G258200 Sobic002G162400--Sobic001G258200 Sobic002G162400--Sobic008G129900 Sobic008G038500--Sobic004G312600 Sobic008G038500--Sobic007G227100 Sobic008G038500--Sobic009G194500 Sobic008G038500--Sobic002G119100 Sobic008G038500--Sobic004G322600 Sobic008G038500--Sobic002G382700 Sobic008G038500--Sobic007G058100 Sobic008G038500--Sobic001G244600 Sobic008G038500--Sobic004G322700 Sobic001G485100 Sobic001G485100 Sobic001G331600--Sobic001G485100 Sobic001G331600--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic001G331600--Sobic004G153900 Sobic002G161400 Sobic002G161400 Sobic001G331600--Sobic002G161400 Sobic001G046000 Sobic001G046000 Sobic001G331600--Sobic001G046000 Sobic001G331600--Sobic004G312600 Sobic001G331600--Sobic007G227100 Sobic006G191500 Sobic006G191500 Sobic001G331600--Sobic006G191500 Sobic004G344600 Sobic004G344600 Sobic001G331600--Sobic004G344600 Sobic001G043000--Sobic006G153400 Sobic001G043000--Sobic003G139500 Sobic001G043000--Sobic010G104800 Sobic001G043000--Sobic001G073300 Sobic001G043000--Sobic009G256100 Sobic010G249700 Sobic010G249700 Sobic001G043000--Sobic010G249700 Sobic004G035900 Sobic004G035900 Sobic001G043000--Sobic004G035900 Sobic003G127800 Sobic003G127800 Sobic001G043000--Sobic003G127800 Sobic010G039500 Sobic010G039500 Sobic001G043000--Sobic010G039500
Octagon: transcription factors


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