Gene annotation
Transcriptome id Sobic.001G221800.3,Sobic.001G221800.2,Sobic.001G221800.1
Synonym Sb01g019510
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
non-lysosomal glucosylceramidase, putative, expressed
UniProt A0A1Z5S6U3 , A0A1B6QKA4
Pfam PF12215 PF04685
Panther DB PTHR12654
NCBI CDD -
KEGG Orthology K17108; non-lysosomal glucosylceramidase
Gene Ontology GO:0016021; integral component of membrane GO:0006665sphingolipid metabolic process GO:0004348glucosylceramidase activity


Orthologs (automatic annotation)
TAIR AT3G24180 : Beta-glucosidase, GBA2 type family protein
RAP-DB (Rice) LOC_Os10g33420.1 : non-lysosomal glucosylceramidase, putative, expressed
MaizeGDB (Corn) Zm00025a006642
Brachypodium PNT67528 , KQK16457 , KQJ97062
Barley HORVU1Hr1G049550.37 , HORVU1Hr1G049550.38 , HORVU1Hr1G049550.18 , HORVU1Hr1G049550.19 , HORVU1Hr1G049550.10 , HORVU1Hr1G049550.11 , HORVU1Hr1G049550.12 , HORVU1Hr1G049550.13 , HORVU1Hr1G049550.14 , HORVU1Hr1G049550.15 , HORVU1Hr1G049550.16 , HORVU1Hr1G049550.17 , HORVU1Hr1G049550.29 , HORVU1Hr1G049550.28 , HORVU1Hr1G049550.25 , HORVU1Hr1G049550.24 , HORVU1Hr1G049550.27 , HORVU1Hr1G049550.26 , HORVU1Hr1G049550.21 , HORVU1Hr1G049550.20 , HORVU1Hr1G049550.23 , HORVU1Hr1G049550.22 , HORVU1Hr1G049550.8 , HORVU1Hr1G049550.9 , HORVU1Hr1G049550.2 , HORVU1Hr1G049550.3 , HORVU1Hr1G049550.1 , HORVU1Hr1G049550.6 , HORVU1Hr1G049550.7 , HORVU1Hr1G049550.4 , HORVU1Hr1G049550.5 , HORVU1Hr1G049550.32 , HORVU1Hr1G049550.33 , HORVU1Hr1G049550.30 , HORVU1Hr1G049550.31 , HORVU1Hr1G049550.36 , HORVU1Hr1G049550.34 , HORVU1Hr1G049550.35
Wheat TraesCS1D02G149100 , TraesCS1D02G149100 , TraesCS1B02G169600 , TraesCS1B02G169600 , TraesCS1A02G152200 , TraesCS1A02G152200 , TraesCS1A02G152200
Populus -


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cDNA sequences
Sobic.001G221800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G355200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
2 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
3 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
4 Sobic.004G322700 - -
5 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -
6 Sobic.010G059000 ANTH/ENTH domain containing protein, putative, expressed -
7 Sobic.003G282000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@suppressor of phythchrome A, putative, expressed -
8 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
9 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
10 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
11 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
12 Sobic.002G196600 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
13 Sobic.004G147800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl isomerase, putative, expressed -
14 Sobic.001G064200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
17 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
18 Sobic.003G350800 SLT1 protein, putative, expressed -
19 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
20 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic001G221800 Sobic001G221800 Sobic003G355200 Sobic003G355200 Sobic001G221800--Sobic003G355200 Sobic009G246300 Sobic009G246300 Sobic001G221800--Sobic009G246300 Sobic001G244700 Sobic001G244700 Sobic001G221800--Sobic001G244700 Sobic004G322700 Sobic004G322700 Sobic001G221800--Sobic004G322700 Sobic006G214300 Sobic006G214300 Sobic001G221800--Sobic006G214300 Sobic010G059000 Sobic010G059000 Sobic001G221800--Sobic010G059000 Sobic003G282000 Sobic003G282000 Sobic001G221800--Sobic003G282000 Sobic004G322600 Sobic004G322600 Sobic001G221800--Sobic004G322600 Sobic003G139500 Sobic003G139500 Sobic001G221800--Sobic003G139500 Sobic003G355200--Sobic001G221800 Sobic003G355200--Sobic006G214300 Sobic003G355200--Sobic003G139500 Sobic008G096700 Sobic008G096700 Sobic003G355200--Sobic008G096700 Sobic003G355200--Sobic003G282000 Sobic009G194500 Sobic009G194500 Sobic003G355200--Sobic009G194500 Sobic009G038900 Sobic009G038900 Sobic003G355200--Sobic009G038900 Sobic003G314000 Sobic003G314000 Sobic003G355200--Sobic003G314000 Sobic002G196600 Sobic002G196600 Sobic003G355200--Sobic002G196600 Sobic009G246300--Sobic004G322700 Sobic009G246300--Sobic001G221800 Sobic009G246300--Sobic003G139500 Sobic003G277600 Sobic003G277600 Sobic009G246300--Sobic003G277600 Sobic009G246300--Sobic004G322600 Sobic009G016000 Sobic009G016000 Sobic009G246300--Sobic009G016000 Sobic001G073300 Sobic001G073300 Sobic009G246300--Sobic001G073300 Sobic001G244600 Sobic001G244600 Sobic009G246300--Sobic001G244600 Sobic009G246300--Sobic001G244700 Sobic002G404800 Sobic002G404800 Sobic001G244700--Sobic002G404800 Sobic001G244700--Sobic002G196600 Sobic001G244700--Sobic009G038900 Sobic001G244700--Sobic001G244600 Sobic001G217900 Sobic001G217900 Sobic001G244700--Sobic001G217900 Sobic010G085100 Sobic010G085100 Sobic001G244700--Sobic010G085100 Sobic006G259800 Sobic006G259800 Sobic001G244700--Sobic006G259800 Sobic003G260100 Sobic003G260100 Sobic001G244700--Sobic003G260100 Sobic008G033000 Sobic008G033000 Sobic001G244700--Sobic008G033000 Sobic004G322700--Sobic004G322600 Sobic002G382700 Sobic002G382700 Sobic004G322700--Sobic002G382700 Sobic008G038500 Sobic008G038500 Sobic004G322700--Sobic008G038500 Sobic002G119100 Sobic002G119100 Sobic004G322700--Sobic002G119100 Sobic004G322700--Sobic001G244600 Sobic001G331600 Sobic001G331600 Sobic004G322700--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic004G322700--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic004G322700--Sobic007G058100 Sobic007G227100 Sobic007G227100 Sobic004G322700--Sobic007G227100 Sobic005G101200 Sobic005G101200 Sobic006G214300--Sobic005G101200 Sobic006G214300--Sobic001G244600 Sobic006G214300--Sobic009G194500 Sobic006G214300--Sobic003G314000 Sobic006G214300--Sobic002G119100 Sobic005G068700 Sobic005G068700 Sobic006G214300--Sobic005G068700 Sobic006G214300--Sobic009G038900 Sobic006G214300--Sobic004G322600 Sobic009G100700 Sobic009G100700 Sobic006G214300--Sobic009G100700 Sobic002G131200 Sobic002G131200 Sobic010G059000--Sobic002G131200 Sobic010G059000--Sobic001G221800 Sobic002G383800 Sobic002G383800 Sobic010G059000--Sobic002G383800 Sobic002G305000 Sobic002G305000 Sobic010G059000--Sobic002G305000 Sobic010G059000--Sobic003G355200 Sobic010G205100 Sobic010G205100 Sobic010G059000--Sobic010G205100 Sobic001G303100 Sobic001G303100 Sobic010G059000--Sobic001G303100 Sobic001G381600 Sobic001G381600 Sobic010G059000--Sobic001G381600 Sobic010G059000--Sobic009G038900 Sobic010G249700 Sobic010G249700 Sobic003G282000--Sobic010G249700 Sobic003G282000--Sobic005G101200 Sobic003G282000--Sobic002G404800 Sobic004G281800 Sobic004G281800 Sobic003G282000--Sobic004G281800 Sobic003G282000--Sobic004G312600 Sobic003G282000--Sobic008G038500 Sobic003G282000--Sobic009G038900 Sobic003G282000--Sobic004G322700 Sobic003G282000--Sobic007G058100 Sobic004G322600--Sobic004G322700 Sobic004G322600--Sobic002G119100 Sobic006G161500 Sobic006G161500 Sobic004G322600--Sobic006G161500 Sobic004G322600--Sobic009G194500 Sobic004G035100 Sobic004G035100 Sobic004G322600--Sobic004G035100 Sobic004G322600--Sobic008G038500 Sobic004G322600--Sobic001G331600 Sobic004G322600--Sobic007G227100 Sobic004G322600--Sobic001G244600 Sobic001G263100 Sobic001G263100 Sobic003G139500--Sobic001G263100 Sobic003G139500--Sobic004G322700 Sobic003G139500--Sobic006G161500 Sobic003G139500--Sobic004G322600 Sobic010G104800 Sobic010G104800 Sobic003G139500--Sobic010G104800 Sobic002G162400 Sobic002G162400 Sobic003G139500--Sobic002G162400 Sobic003G139500--Sobic008G038500 Sobic003G139500--Sobic001G331600 Sobic001G043000 Sobic001G043000 Sobic003G139500--Sobic001G043000
Octagon: transcription factors


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