Gene annotation
Transcriptome id Sobic.001G064200.4,Sobic.001G064200.3,Sobic.001G064200.5,Sobic.001G064200.2,Sobic.001G064200.1
Synonym Sb01g005835
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QHJ3 , A0A1B6QHK5
Pfam -
Panther DB PTHR35161 PTHR35161:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19080 : metaxin-related
RAP-DB (Rice) LOC_Os06g07160.1,LOC_Os12g07390.1 : expressed protein
MaizeGDB (Corn) Zm00025a049894
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
2 Sobic.010G074300 smr domain containing protein, expressed -
3 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
4 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
5 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
6 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
7 Sobic.003G198800 myosin, putative, expressed K10357: myosin V
8 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.008G151100 protein kinase domain containing protein, expressed -
10 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
11 Sobic.003G242000 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
12 Sobic.001G221800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
13 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
14 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
15 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
16 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
18 Sobic.007G227100 expressed protein -
19 Sobic.003G385100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBZ1 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed -
20 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III


Gene co-expression network
sample Sobic001G064200 Sobic001G064200 Sobic004G312600 Sobic004G312600 Sobic001G064200--Sobic004G312600 Sobic010G074300 Sobic010G074300 Sobic001G064200--Sobic010G074300 Sobic003G191700 Sobic003G191700 Sobic001G064200--Sobic003G191700 Sobic006G257800 Sobic006G257800 Sobic001G064200--Sobic006G257800 Sobic004G281800 Sobic004G281800 Sobic001G064200--Sobic004G281800 Sobic010G251300 Sobic010G251300 Sobic001G064200--Sobic010G251300 Sobic003G198800 Sobic003G198800 Sobic001G064200--Sobic003G198800 Sobic006G002300 Sobic006G002300 Sobic001G064200--Sobic006G002300 Sobic008G151100 Sobic008G151100 Sobic001G064200--Sobic008G151100 Sobic007G227100 Sobic007G227100 Sobic004G312600--Sobic007G227100 Sobic004G127800 Sobic004G127800 Sobic004G312600--Sobic004G127800 Sobic008G038500 Sobic008G038500 Sobic004G312600--Sobic008G038500 Sobic001G331600 Sobic001G331600 Sobic004G312600--Sobic001G331600 Sobic002G382700 Sobic002G382700 Sobic004G312600--Sobic002G382700 Sobic002G293500 Sobic002G293500 Sobic004G312600--Sobic002G293500 Sobic001G077300 Sobic001G077300 Sobic004G312600--Sobic001G077300 Sobic005G106600 Sobic005G106600 Sobic004G312600--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic004G312600--Sobic003G220100 Sobic010G147100 Sobic010G147100 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic004G042200 Sobic004G042200 Sobic003G191700--Sobic004G042200 Sobic003G313300 Sobic003G313300 Sobic003G191700--Sobic003G313300 Sobic006G133900 Sobic006G133900 Sobic003G191700--Sobic006G133900 Sobic003G229300 Sobic003G229300 Sobic003G191700--Sobic003G229300 Sobic003G017100 Sobic003G017100 Sobic003G191700--Sobic003G017100 Sobic009G038900 Sobic009G038900 Sobic003G191700--Sobic009G038900 Sobic007G198300 Sobic007G198300 Sobic003G191700--Sobic007G198300 Sobic003G155100 Sobic003G155100 Sobic003G191700--Sobic003G155100 Sobic010G002700 Sobic010G002700 Sobic003G191700--Sobic010G002700 Sobic008G167600 Sobic008G167600 Sobic006G257800--Sobic008G167600 Sobic004G189200 Sobic004G189200 Sobic006G257800--Sobic004G189200 Sobic006G257800--Sobic003G198800 Sobic002G383600 Sobic002G383600 Sobic006G257800--Sobic002G383600 Sobic001G062300 Sobic001G062300 Sobic006G257800--Sobic001G062300 Sobic010G177400 Sobic010G177400 Sobic006G257800--Sobic010G177400 Sobic002G295100 Sobic002G295100 Sobic006G257800--Sobic002G295100 Sobic006G051800 Sobic006G051800 Sobic006G257800--Sobic006G051800 Sobic002G341000 Sobic002G341000 Sobic006G257800--Sobic002G341000 Sobic004G281800--Sobic009G038900 Sobic005G101200 Sobic005G101200 Sobic004G281800--Sobic005G101200 Sobic001G352400 Sobic001G352400 Sobic004G281800--Sobic001G352400 Sobic010G275700 Sobic010G275700 Sobic004G281800--Sobic010G275700 Sobic003G021100 Sobic003G021100 Sobic004G281800--Sobic003G021100 Sobic004G281800--Sobic002G382700 Sobic004G281800--Sobic005G106600 Sobic004G281800--Sobic004G312600 Sobic004G281800--Sobic003G220100 Sobic002G290400 Sobic002G290400 Sobic010G251300--Sobic002G290400 Sobic009G200800 Sobic009G200800 Sobic010G251300--Sobic009G200800 Sobic003G043300 Sobic003G043300 Sobic010G251300--Sobic003G043300 Sobic010G251300--Sobic001G064200 Sobic010G251300--Sobic002G383600 Sobic003G350800 Sobic003G350800 Sobic010G251300--Sobic003G350800 Sobic007G146400 Sobic007G146400 Sobic010G251300--Sobic007G146400 Sobic001G333600 Sobic001G333600 Sobic010G251300--Sobic001G333600 Sobic001G057700 Sobic001G057700 Sobic010G251300--Sobic001G057700 Sobic001G534700 Sobic001G534700 Sobic003G198800--Sobic001G534700 Sobic003G198800--Sobic009G074400 Sobic003G275700 Sobic003G275700 Sobic003G198800--Sobic003G275700 Sobic003G198800--Sobic006G257800 Sobic003G198800--Sobic003G155100 Sobic001G128300 Sobic001G128300 Sobic003G198800--Sobic001G128300 Sobic001G481900 Sobic001G481900 Sobic003G198800--Sobic001G481900 Sobic003G198800--Sobic008G151100 Sobic002G411600 Sobic002G411600 Sobic003G198800--Sobic002G411600 Sobic006G002300--Sobic003G198800 Sobic001G381600 Sobic001G381600 Sobic006G002300--Sobic001G381600 Sobic002G187700 Sobic002G187700 Sobic006G002300--Sobic002G187700 Sobic003G115900 Sobic003G115900 Sobic006G002300--Sobic003G115900 Sobic002G128200 Sobic002G128200 Sobic006G002300--Sobic002G128200 Sobic006G002300--Sobic007G198300 Sobic003G301900 Sobic003G301900 Sobic006G002300--Sobic003G301900 Sobic006G002300--Sobic003G229300 Sobic001G375100 Sobic001G375100 Sobic006G002300--Sobic001G375100 Sobic008G151100--Sobic003G198800 Sobic008G151100--Sobic001G381600 Sobic001G212300 Sobic001G212300 Sobic008G151100--Sobic001G212300 Sobic008G151100--Sobic003G191700 Sobic009G238000 Sobic009G238000 Sobic008G151100--Sobic009G238000 Sobic005G045000 Sobic005G045000 Sobic008G151100--Sobic005G045000 Sobic010G097600 Sobic010G097600 Sobic008G151100--Sobic010G097600 Sobic008G151100--Sobic003G229300 Sobic008G151100--Sobic007G198300
Octagon: transcription factors


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