Gene annotation
Transcriptome id Sobic.002G341000.1
Synonym Sb02g036520
Functional annotation lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
UniProt C5XBJ6
Pfam PF05212
Panther DB PTHR31210 PTHR31210:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11170 : Protein of unknown function (DUF707)
RAP-DB (Rice) LOC_Os07g37760.1 : lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
MaizeGDB (Corn) Zm00025a048407 , Zm00025a014926
Brachypodium PNT74926 , PNT74925 , KQK15726 , KQK15727 , KQK15724 , KQK15725 , KQK15722 , KQK15723 , KQK15728 , KQK15729
Barley HORVU2Hr1G040000.32 , HORVU2Hr1G040000.19 , HORVU2Hr1G040000.34 , HORVU2Hr1G040000.35 , HORVU2Hr1G040000.30 , HORVU2Hr1G040000.18 , HORVU2Hr1G040000.33 , HORVU2Hr1G040000.16 , HORVU2Hr1G040000.17 , HORVU2Hr1G040000.14 , HORVU2Hr1G040000.15 , HORVU2Hr1G040000.12 , HORVU2Hr1G040000.13 , HORVU2Hr1G040000.10 , HORVU2Hr1G040000.11 , HORVU2Hr1G040000.27 , HORVU2Hr1G040000.26 , HORVU2Hr1G040000.25 , HORVU2Hr1G040000.24 , HORVU2Hr1G040000.23 , HORVU2Hr1G040000.22 , HORVU2Hr1G040000.21 , HORVU2Hr1G040000.20 , HORVU2Hr1G040000.29 , HORVU2Hr1G040000.28 , HORVU2Hr1G040000.8 , HORVU2Hr1G040000.9 , HORVU2Hr1G040000.4 , HORVU2Hr1G040000.5 , HORVU2Hr1G040000.6 , HORVU2Hr1G040000.7 , HORVU2Hr1G040000.1 , HORVU2Hr1G040000.2 , HORVU2Hr1G040000.3
Wheat TraesCS2B02G229900 , TraesCS2B02G229900 , TraesCS2A02G202800 , TraesCS2A02G202800 , TraesCS2D02G212900 , TraesCS2D02G212900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
2 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
3 Sobic.003G271400 chloride transporter, chloride channel family, putative, expressed -
4 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
5 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
6 Sobic.008G167600 VTC2, putative, expressed -
7 Sobic.001G207800 integral membrane protein, putative, expressed -
8 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
9 Sobic.003G264800 expressed protein -
10 Sobic.003G003450 - K01177: beta-amylase
11 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
12 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
13 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
14 Sobic.003G220100 - -
15 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
16 Sobic.004G355700 C2 domain containing protein, putative, expressed -
17 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
18 Sobic.003G028900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.003G198800 myosin, putative, expressed K10357: myosin V
20 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -


Gene co-expression network
sample Sobic002G341000 Sobic002G341000 Sobic004G151300 Sobic004G151300 Sobic002G341000--Sobic004G151300 Sobic004G169000 Sobic004G169000 Sobic002G341000--Sobic004G169000 Sobic003G271400 Sobic003G271400 Sobic002G341000--Sobic003G271400 Sobic006G257800 Sobic006G257800 Sobic002G341000--Sobic006G257800 Sobic003G191700 Sobic003G191700 Sobic002G341000--Sobic003G191700 Sobic008G167600 Sobic008G167600 Sobic002G341000--Sobic008G167600 Sobic001G207800 Sobic001G207800 Sobic002G341000--Sobic001G207800 Sobic004G312600 Sobic004G312600 Sobic002G341000--Sobic004G312600 Sobic003G264800 Sobic003G264800 Sobic002G341000--Sobic003G264800 Sobic010G150100 Sobic010G150100 Sobic004G151300--Sobic010G150100 Sobic004G151300--Sobic008G167600 Sobic001G345100 Sobic001G345100 Sobic004G151300--Sobic001G345100 Sobic006G090100 Sobic006G090100 Sobic004G151300--Sobic006G090100 Sobic004G151300--Sobic004G312600 Sobic004G151300--Sobic001G207800 Sobic001G331600 Sobic001G331600 Sobic004G151300--Sobic001G331600 Sobic002G382700 Sobic002G382700 Sobic004G151300--Sobic002G382700 Sobic007G227100 Sobic007G227100 Sobic004G151300--Sobic007G227100 Sobic001G352400 Sobic001G352400 Sobic004G169000--Sobic001G352400 Sobic004G169000--Sobic002G341000 Sobic001G333800 Sobic001G333800 Sobic004G169000--Sobic001G333800 Sobic004G281800 Sobic004G281800 Sobic004G169000--Sobic004G281800 Sobic006G050700 Sobic006G050700 Sobic004G169000--Sobic006G050700 Sobic006G175800 Sobic006G175800 Sobic004G169000--Sobic006G175800 Sobic003G229300 Sobic003G229300 Sobic004G169000--Sobic003G229300 Sobic004G042200 Sobic004G042200 Sobic004G169000--Sobic004G042200 Sobic005G106600 Sobic005G106600 Sobic004G169000--Sobic005G106600 Sobic003G271400--Sobic007G227100 Sobic003G271400--Sobic004G312600 Sobic004G069000 Sobic004G069000 Sobic003G271400--Sobic004G069000 Sobic003G003450 Sobic003G003450 Sobic003G271400--Sobic003G003450 Sobic004G337400 Sobic004G337400 Sobic003G271400--Sobic004G337400 Sobic004G127800 Sobic004G127800 Sobic003G271400--Sobic004G127800 Sobic008G038500 Sobic008G038500 Sobic003G271400--Sobic008G038500 Sobic003G271400--Sobic004G151300 Sobic003G271400--Sobic010G150100 Sobic006G257800--Sobic008G167600 Sobic004G189200 Sobic004G189200 Sobic006G257800--Sobic004G189200 Sobic003G198800 Sobic003G198800 Sobic006G257800--Sobic003G198800 Sobic002G383600 Sobic002G383600 Sobic006G257800--Sobic002G383600 Sobic001G062300 Sobic001G062300 Sobic006G257800--Sobic001G062300 Sobic010G177400 Sobic010G177400 Sobic006G257800--Sobic010G177400 Sobic002G295100 Sobic002G295100 Sobic006G257800--Sobic002G295100 Sobic006G051800 Sobic006G051800 Sobic006G257800--Sobic006G051800 Sobic006G257800--Sobic002G341000 Sobic003G191700--Sobic004G042200 Sobic003G313300 Sobic003G313300 Sobic003G191700--Sobic003G313300 Sobic006G133900 Sobic006G133900 Sobic003G191700--Sobic006G133900 Sobic003G191700--Sobic003G229300 Sobic003G017100 Sobic003G017100 Sobic003G191700--Sobic003G017100 Sobic009G038900 Sobic009G038900 Sobic003G191700--Sobic009G038900 Sobic007G198300 Sobic007G198300 Sobic003G191700--Sobic007G198300 Sobic003G155100 Sobic003G155100 Sobic003G191700--Sobic003G155100 Sobic010G002700 Sobic010G002700 Sobic003G191700--Sobic010G002700 Sobic008G167600--Sobic006G257800 Sobic008G167600--Sobic004G151300 Sobic002G291800 Sobic002G291800 Sobic008G167600--Sobic002G291800 Sobic008G167600--Sobic004G312600 Sobic008G167600--Sobic004G127800 Sobic002G293500 Sobic002G293500 Sobic008G167600--Sobic002G293500 Sobic002G081400 Sobic002G081400 Sobic008G167600--Sobic002G081400 Sobic008G167600--Sobic006G090100 Sobic008G167600--Sobic001G333800 Sobic001G207800--Sobic006G090100 Sobic001G283100 Sobic001G283100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G509200 Sobic001G509200 Sobic001G207800--Sobic001G509200 Sobic001G077300 Sobic001G077300 Sobic001G207800--Sobic001G077300 Sobic007G108900 Sobic007G108900 Sobic001G207800--Sobic007G108900 Sobic009G073900 Sobic009G073900 Sobic001G207800--Sobic009G073900 Sobic003G341300 Sobic003G341300 Sobic001G207800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic001G207800--Sobic007G157300 Sobic004G312600--Sobic007G227100 Sobic004G312600--Sobic004G127800 Sobic004G312600--Sobic008G038500 Sobic004G312600--Sobic001G331600 Sobic004G312600--Sobic002G382700 Sobic004G312600--Sobic002G293500 Sobic004G312600--Sobic001G077300 Sobic004G312600--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic004G312600--Sobic003G220100 Sobic003G186900 Sobic003G186900 Sobic003G264800--Sobic003G186900 Sobic003G264800--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic003G264800--Sobic006G232600 Sobic003G264800--Sobic005G106600 Sobic002G072400 Sobic002G072400 Sobic003G264800--Sobic002G072400 Sobic009G103000 Sobic009G103000 Sobic003G264800--Sobic009G103000 Sobic004G238200 Sobic004G238200 Sobic003G264800--Sobic004G238200 Sobic004G207400 Sobic004G207400 Sobic003G264800--Sobic004G207400 Sobic003G264800--Sobic004G337400
Octagon: transcription factors


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