Gene annotation
Transcriptome id Sobic.004G169000.1
Synonym Sb04g022040, DGD1
Functional annotation digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
UniProt C5XU20
Pfam PF00534
Panther DB PTHR12526 PTHR12526:SF395
NCBI CDD -
KEGG Orthology K09480; digalactosyldiacylglycerol synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11670 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os02g33580.1 : digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011472 , Zm00025a020584
Brachypodium KQJ99777 , KQJ99778 , KQJ82560
Barley HORVU2Hr1G073850.10 , HORVU2Hr1G073850.9 , HORVU2Hr1G073850.5 , HORVU2Hr1G073850.4 , HORVU2Hr1G073850.7 , HORVU2Hr1G073850.6 , HORVU2Hr1G073850.1 , HORVU2Hr1G073850.2 , HORVU2Hr1G073850.3
Wheat TraesCS2B02G314000 , TraesCS2D02G295800 , TraesCS2D02G295800 , TraesCS2B02G314000 , TraesCS2A02G297800 , TraesCS2A02G297800 , TraesCS2A02G297800
Populus -


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cDNA sequences
Sobic.004G169000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
3 Sobic.001G333800 MYB family transcription factor, putative, expressed -
4 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
5 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -
6 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
7 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
8 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
9 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
10 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
11 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
12 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
13 Sobic.002G187700 expressed protein -
14 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
15 Sobic.001G476700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.001G133000 expressed protein -
17 Sobic.003G166200 expressed protein -
18 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
19 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
20 Sobic.003G220100 - -


Gene co-expression network
sample Sobic004G169000 Sobic004G169000 Sobic001G352400 Sobic001G352400 Sobic004G169000--Sobic001G352400 Sobic002G341000 Sobic002G341000 Sobic004G169000--Sobic002G341000 Sobic001G333800 Sobic001G333800 Sobic004G169000--Sobic001G333800 Sobic004G281800 Sobic004G281800 Sobic004G169000--Sobic004G281800 Sobic006G050700 Sobic006G050700 Sobic004G169000--Sobic006G050700 Sobic006G175800 Sobic006G175800 Sobic004G169000--Sobic006G175800 Sobic003G229300 Sobic003G229300 Sobic004G169000--Sobic003G229300 Sobic004G042200 Sobic004G042200 Sobic004G169000--Sobic004G042200 Sobic005G106600 Sobic005G106600 Sobic004G169000--Sobic005G106600 Sobic001G352400--Sobic004G281800 Sobic010G275700 Sobic010G275700 Sobic001G352400--Sobic010G275700 Sobic002G382700 Sobic002G382700 Sobic001G352400--Sobic002G382700 Sobic004G322700 Sobic004G322700 Sobic001G352400--Sobic004G322700 Sobic002G119100 Sobic002G119100 Sobic001G352400--Sobic002G119100 Sobic008G038500 Sobic008G038500 Sobic001G352400--Sobic008G038500 Sobic005G101200 Sobic005G101200 Sobic001G352400--Sobic005G101200 Sobic001G352400--Sobic004G169000 Sobic009G038900 Sobic009G038900 Sobic001G352400--Sobic009G038900 Sobic004G151300 Sobic004G151300 Sobic002G341000--Sobic004G151300 Sobic002G341000--Sobic004G169000 Sobic003G271400 Sobic003G271400 Sobic002G341000--Sobic003G271400 Sobic006G257800 Sobic006G257800 Sobic002G341000--Sobic006G257800 Sobic003G191700 Sobic003G191700 Sobic002G341000--Sobic003G191700 Sobic008G167600 Sobic008G167600 Sobic002G341000--Sobic008G167600 Sobic001G207800 Sobic001G207800 Sobic002G341000--Sobic001G207800 Sobic004G312600 Sobic004G312600 Sobic002G341000--Sobic004G312600 Sobic003G264800 Sobic003G264800 Sobic002G341000--Sobic003G264800 Sobic001G359300 Sobic001G359300 Sobic001G333800--Sobic001G359300 Sobic001G333800--Sobic005G106600 Sobic009G093100 Sobic009G093100 Sobic001G333800--Sobic009G093100 Sobic006G090100 Sobic006G090100 Sobic001G333800--Sobic006G090100 Sobic001G303200 Sobic001G303200 Sobic001G333800--Sobic001G303200 Sobic003G220100 Sobic003G220100 Sobic001G333800--Sobic003G220100 Sobic001G333800--Sobic009G038900 Sobic009G073900 Sobic009G073900 Sobic001G333800--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic001G333800--Sobic001G077300 Sobic004G281800--Sobic009G038900 Sobic004G281800--Sobic005G101200 Sobic004G281800--Sobic001G352400 Sobic004G281800--Sobic010G275700 Sobic003G021100 Sobic003G021100 Sobic004G281800--Sobic003G021100 Sobic004G281800--Sobic002G382700 Sobic004G281800--Sobic005G106600 Sobic004G281800--Sobic004G312600 Sobic004G281800--Sobic003G220100 Sobic003G155100 Sobic003G155100 Sobic006G050700--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic006G050700--Sobic006G219600 Sobic008G001200 Sobic008G001200 Sobic006G050700--Sobic008G001200 Sobic009G201300 Sobic009G201300 Sobic006G050700--Sobic009G201300 Sobic002G346200 Sobic002G346200 Sobic006G050700--Sobic002G346200 Sobic006G050700--Sobic004G042200 Sobic010G206900 Sobic010G206900 Sobic006G050700--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic006G050700--Sobic001G230000 Sobic001G527800 Sobic001G527800 Sobic006G050700--Sobic001G527800 Sobic010G262500 Sobic010G262500 Sobic006G175800--Sobic010G262500 Sobic006G175800--Sobic004G169000 Sobic002G305000 Sobic002G305000 Sobic006G175800--Sobic002G305000 Sobic002G187700 Sobic002G187700 Sobic006G175800--Sobic002G187700 Sobic001G488700 Sobic001G488700 Sobic006G175800--Sobic001G488700 Sobic003G190400 Sobic003G190400 Sobic006G175800--Sobic003G190400 Sobic003G043300 Sobic003G043300 Sobic006G175800--Sobic003G043300 Sobic001G500800 Sobic001G500800 Sobic006G175800--Sobic001G500800 Sobic010G196500 Sobic010G196500 Sobic006G175800--Sobic010G196500 Sobic003G229300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic008G115900 Sobic008G115900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic004G042200--Sobic009G038900 Sobic010G002700 Sobic010G002700 Sobic004G042200--Sobic010G002700 Sobic004G042200--Sobic003G191700 Sobic004G042200--Sobic006G050700 Sobic004G042200--Sobic003G220100 Sobic004G042200--Sobic003G155100 Sobic010G243900 Sobic010G243900 Sobic004G042200--Sobic010G243900 Sobic004G042200--Sobic005G106600 Sobic004G042200--Sobic006G133900 Sobic005G106600--Sobic003G220100 Sobic005G106600--Sobic001G333800 Sobic005G106600--Sobic009G038900 Sobic001G133000 Sobic001G133000 Sobic005G106600--Sobic001G133000 Sobic005G106600--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic005G106600--Sobic007G058100 Sobic007G136200 Sobic007G136200 Sobic005G106600--Sobic007G136200 Sobic005G106600--Sobic006G219600 Sobic001G378100 Sobic001G378100 Sobic005G106600--Sobic001G378100
Octagon: transcription factors


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