Gene annotation
Transcriptome id Sobic.001G352400.2,Sobic.001G352400.1,Sobic.001G352400.3,Sobic.001G352400.4
Synonym Sb01g033720
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QMV2 , A0A1B6QMU1
Pfam -
Panther DB PTHR33334 PTHR33334:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64170 : dentin sialophosphoprotein-related
RAP-DB (Rice) LOC_Os03g27019.2,LOC_Os03g27019.1 : expressed protein
MaizeGDB (Corn) Zm00025a052088 , Zm00025a002708
Brachypodium -
Barley HORVU4Hr1G040290.3 , HORVU4Hr1G040290.2 , HORVU4Hr1G040290.1 , HORVU4Hr1G040290.6 , HORVU4Hr1G040290.5
Wheat TraesCS4B02G153700 , TraesCS4B02G153700 , TraesCS4B02G153700 , TraesCS4B02G153700 , TraesCS4B02G153700 , TraesCS4B02G153700 , TraesCS4B02G153700 , TraesCS4B02G153700 , TraesCS4D02G166000 , TraesCS4D02G166000 , TraesCS4D02G166000 , TraesCS4D02G166000 , TraesCS4A02G162200 , TraesCS4A02G162200
Populus -


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cDNA sequences
Sobic.001G352400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
2 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
3 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
4 Sobic.004G322700 - -
5 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
6 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
7 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
8 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
9 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
10 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
11 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
12 Sobic.003G166200 expressed protein -
13 Sobic.001G333800 MYB family transcription factor, putative, expressed -
14 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
16 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G021100 expressed protein -
18 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
19 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.007G227100 expressed protein -


Gene co-expression network
sample Sobic001G352400 Sobic001G352400 Sobic004G281800 Sobic004G281800 Sobic001G352400--Sobic004G281800 Sobic010G275700 Sobic010G275700 Sobic001G352400--Sobic010G275700 Sobic002G382700 Sobic002G382700 Sobic001G352400--Sobic002G382700 Sobic004G322700 Sobic004G322700 Sobic001G352400--Sobic004G322700 Sobic002G119100 Sobic002G119100 Sobic001G352400--Sobic002G119100 Sobic008G038500 Sobic008G038500 Sobic001G352400--Sobic008G038500 Sobic005G101200 Sobic005G101200 Sobic001G352400--Sobic005G101200 Sobic004G169000 Sobic004G169000 Sobic001G352400--Sobic004G169000 Sobic009G038900 Sobic009G038900 Sobic001G352400--Sobic009G038900 Sobic004G281800--Sobic009G038900 Sobic004G281800--Sobic005G101200 Sobic004G281800--Sobic001G352400 Sobic004G281800--Sobic010G275700 Sobic003G021100 Sobic003G021100 Sobic004G281800--Sobic003G021100 Sobic004G281800--Sobic002G382700 Sobic005G106600 Sobic005G106600 Sobic004G281800--Sobic005G106600 Sobic004G312600 Sobic004G312600 Sobic004G281800--Sobic004G312600 Sobic003G220100 Sobic003G220100 Sobic004G281800--Sobic003G220100 Sobic010G275700--Sobic003G021100 Sobic010G275700--Sobic005G101200 Sobic010G275700--Sobic004G281800 Sobic010G275700--Sobic001G352400 Sobic004G189800 Sobic004G189800 Sobic010G275700--Sobic004G189800 Sobic010G275700--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic010G275700--Sobic001G333800 Sobic010G275700--Sobic002G119100 Sobic010G275700--Sobic009G038900 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic001G258200 Sobic001G258200 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic003G341300 Sobic003G341300 Sobic002G382700--Sobic003G341300 Sobic001G283100 Sobic001G283100 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic004G322600 Sobic004G322600 Sobic004G322700--Sobic004G322600 Sobic004G322700--Sobic002G382700 Sobic004G322700--Sobic008G038500 Sobic004G322700--Sobic002G119100 Sobic001G244600 Sobic001G244600 Sobic004G322700--Sobic001G244600 Sobic001G331600 Sobic001G331600 Sobic004G322700--Sobic001G331600 Sobic004G322700--Sobic004G312600 Sobic004G322700--Sobic007G058100 Sobic004G322700--Sobic007G227100 Sobic009G194500 Sobic009G194500 Sobic002G119100--Sobic009G194500 Sobic002G119100--Sobic004G322600 Sobic006G161500 Sobic006G161500 Sobic002G119100--Sobic006G161500 Sobic002G119100--Sobic008G038500 Sobic004G127800 Sobic004G127800 Sobic002G119100--Sobic004G127800 Sobic002G119100--Sobic001G244600 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G293500 Sobic002G293500 Sobic002G119100--Sobic002G293500 Sobic008G038500--Sobic004G312600 Sobic008G038500--Sobic007G227100 Sobic008G038500--Sobic009G194500 Sobic008G038500--Sobic002G119100 Sobic008G038500--Sobic004G322600 Sobic008G038500--Sobic002G382700 Sobic008G038500--Sobic007G058100 Sobic008G038500--Sobic001G244600 Sobic008G038500--Sobic004G322700 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic005G101200--Sobic009G038900 Sobic007G105500 Sobic007G105500 Sobic005G101200--Sobic007G105500 Sobic003G185900 Sobic003G185900 Sobic005G101200--Sobic003G185900 Sobic010G085100 Sobic010G085100 Sobic005G101200--Sobic010G085100 Sobic005G101200--Sobic004G281800 Sobic004G169000--Sobic001G352400 Sobic002G341000 Sobic002G341000 Sobic004G169000--Sobic002G341000 Sobic004G169000--Sobic001G333800 Sobic004G169000--Sobic004G281800 Sobic006G050700 Sobic006G050700 Sobic004G169000--Sobic006G050700 Sobic006G175800 Sobic006G175800 Sobic004G169000--Sobic006G175800 Sobic003G229300 Sobic003G229300 Sobic004G169000--Sobic003G229300 Sobic004G042200 Sobic004G042200 Sobic004G169000--Sobic004G042200 Sobic004G169000--Sobic005G106600 Sobic009G038900--Sobic004G281800 Sobic009G038900--Sobic005G101200 Sobic009G038900--Sobic005G106600 Sobic009G038900--Sobic005G068700 Sobic009G038900--Sobic004G042200 Sobic009G038900--Sobic003G220100 Sobic009G038900--Sobic001G333800 Sobic001G359300 Sobic001G359300 Sobic009G038900--Sobic001G359300 Sobic009G038900--Sobic010G085100
Octagon: transcription factors


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