Gene annotation
Transcriptome id Sobic.003G028900.1
Synonym Sb03g002710
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5XLT8
Pfam PF12695
Panther DB PTHR11614:SF96 PTHR11614
NCBI CDD KOG1455; Lysophospholipase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11650 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g10250.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022967
Brachypodium KQK03184
Barley HORVU3Hr1G027160.4 , HORVU3Hr1G027160.1 , HORVU3Hr1G027160.3 , HORVU3Hr1G027160.2
Wheat TraesCS3D02G142300 , TraesCS3A02G312100 , TraesCS3B02G160100
Populus -


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cDNA sequences
Sobic.003G028900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
2 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
3 Sobic.001G207800 integral membrane protein, putative, expressed -
4 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G136200 expressed protein -
6 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
7 Sobic.005G206500 sodium/calcium exchanger protein, putative, expressed K03452: magnesium/proton exchanger
8 Sobic.010G249700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.005G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os11bglu36 SFR2 homologue, expressed -
12 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
13 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
14 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
15 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
16 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
17 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
18 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
19 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
20 Sobic.009G015100 ACT domain containing protein, expressed -


Gene co-expression network
sample Sobic003G028900 Sobic003G028900 Sobic002G306800 Sobic002G306800 Sobic003G028900--Sobic002G306800 Sobic002G382700 Sobic002G382700 Sobic003G028900--Sobic002G382700 Sobic001G207800 Sobic001G207800 Sobic003G028900--Sobic001G207800 Sobic004G356400 Sobic004G356400 Sobic003G028900--Sobic004G356400 Sobic007G136200 Sobic007G136200 Sobic003G028900--Sobic007G136200 Sobic001G303200 Sobic001G303200 Sobic003G028900--Sobic001G303200 Sobic005G206500 Sobic005G206500 Sobic003G028900--Sobic005G206500 Sobic010G249700 Sobic010G249700 Sobic003G028900--Sobic010G249700 Sobic001G258200 Sobic001G258200 Sobic003G028900--Sobic001G258200 Sobic003G005000 Sobic003G005000 Sobic002G306800--Sobic003G005000 Sobic001G289500 Sobic001G289500 Sobic002G306800--Sobic001G289500 Sobic003G341300 Sobic003G341300 Sobic002G306800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic002G306800--Sobic007G157300 Sobic002G306800--Sobic002G382700 Sobic003G094100 Sobic003G094100 Sobic002G306800--Sobic003G094100 Sobic001G283100 Sobic001G283100 Sobic002G306800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic002G306800--Sobic004G035900 Sobic004G202200 Sobic004G202200 Sobic002G306800--Sobic004G202200 Sobic002G382700--Sobic001G207800 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic002G382700--Sobic003G341300 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic001G207800--Sobic006G090100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G509200 Sobic001G509200 Sobic001G207800--Sobic001G509200 Sobic001G207800--Sobic001G077300 Sobic007G108900 Sobic007G108900 Sobic001G207800--Sobic007G108900 Sobic009G073900 Sobic009G073900 Sobic001G207800--Sobic009G073900 Sobic001G207800--Sobic003G341300 Sobic001G207800--Sobic007G157300 Sobic001G017300 Sobic001G017300 Sobic004G356400--Sobic001G017300 Sobic005G101200 Sobic005G101200 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic004G356400--Sobic007G105500 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic004G356400--Sobic001G258200 Sobic007G136200--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100 Sobic001G303200--Sobic001G283100 Sobic001G303200--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic001G303200--Sobic001G333800 Sobic001G303200--Sobic001G207800 Sobic006G102000 Sobic006G102000 Sobic001G303200--Sobic006G102000 Sobic001G303200--Sobic007G108900 Sobic006G221000 Sobic006G221000 Sobic001G303200--Sobic006G221000 Sobic001G303200--Sobic006G090100 Sobic001G303200--Sobic003G094100 Sobic004G069000 Sobic004G069000 Sobic005G206500--Sobic004G069000 Sobic005G206500--Sobic010G249700 Sobic008G064700 Sobic008G064700 Sobic005G206500--Sobic008G064700 Sobic003G271400 Sobic003G271400 Sobic005G206500--Sobic003G271400 Sobic005G206500--Sobic005G101200 Sobic005G206500--Sobic003G028900 Sobic004G281800 Sobic004G281800 Sobic005G206500--Sobic004G281800 Sobic003G021100 Sobic003G021100 Sobic005G206500--Sobic003G021100 Sobic010G275700 Sobic010G275700 Sobic005G206500--Sobic010G275700 Sobic010G249700--Sobic001G017300 Sobic010G249700--Sobic005G101200 Sobic010G249700--Sobic007G105500 Sobic006G093800 Sobic006G093800 Sobic010G249700--Sobic006G093800 Sobic009G256100 Sobic009G256100 Sobic010G249700--Sobic009G256100 Sobic010G255300 Sobic010G255300 Sobic010G249700--Sobic010G255300 Sobic003G282000 Sobic003G282000 Sobic010G249700--Sobic003G282000 Sobic010G249700--Sobic002G382700 Sobic010G249700--Sobic004G356400 Sobic001G258200--Sobic003G185900 Sobic001G258200--Sobic002G382700 Sobic008G129900 Sobic008G129900 Sobic001G258200--Sobic008G129900 Sobic001G258200--Sobic001G504400 Sobic001G258200--Sobic004G189800 Sobic008G033000 Sobic008G033000 Sobic001G258200--Sobic008G033000 Sobic002G206300 Sobic002G206300 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic005G068700 Sobic005G068700 Sobic001G258200--Sobic005G068700
Octagon: transcription factors


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