Gene annotation
Transcriptome id Sobic.005G206500.1
Synonym MHX1, ATMHX1, MHX, Sb05g026100, ATMHX
Functional annotation sodium/calcium exchanger protein, putative, expressed
UniProt C5Y7G4
Pfam PF01699
Panther DB PTHR11878
NCBI CDD KOG1306; Ca2+/Na+ exchanger NCX1 and related proteins
KEGG Orthology K03452; magnesium/proton exchanger
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G47600 : magnesium/proton exchanger
RAP-DB (Rice) LOC_Os11g43860.1 : sodium/calcium exchanger protein, putative, expressed
MaizeGDB (Corn) Zm00025a029183
Brachypodium KQJ87423 , PNT63063 , PNT63067 , PNT63066 , PNT63065 , PNT63064
Barley -
Wheat TraesCS4A02G168900 , TraesCS4A02G168900 , TraesCS4B02G150000 , TraesCS4D02G146900 , TraesCS4D02G146900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G069000 expressed protein -
2 Sobic.010G249700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.008G064700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VTC2, putative, expressed K14190: GDP-L-galactose phosphorylase
4 Sobic.003G271400 chloride transporter, chloride channel family, putative, expressed -
5 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
6 Sobic.003G028900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
8 Sobic.003G021100 expressed protein -
9 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
10 Sobic.001G194300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fringe-related protein, putative, expressed -
11 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
12 Sobic.009G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
13 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
14 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
15 Sobic.004G189800 ABC1 family domain containing protein, putative, expressed -
16 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.005G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os11bglu36 SFR2 homologue, expressed -
18 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
19 Sobic.006G093800 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2


Gene co-expression network
sample Sobic005G206500 Sobic005G206500 Sobic004G069000 Sobic004G069000 Sobic005G206500--Sobic004G069000 Sobic010G249700 Sobic010G249700 Sobic005G206500--Sobic010G249700 Sobic008G064700 Sobic008G064700 Sobic005G206500--Sobic008G064700 Sobic003G271400 Sobic003G271400 Sobic005G206500--Sobic003G271400 Sobic005G101200 Sobic005G101200 Sobic005G206500--Sobic005G101200 Sobic003G028900 Sobic003G028900 Sobic005G206500--Sobic003G028900 Sobic004G281800 Sobic004G281800 Sobic005G206500--Sobic004G281800 Sobic003G021100 Sobic003G021100 Sobic005G206500--Sobic003G021100 Sobic010G275700 Sobic010G275700 Sobic005G206500--Sobic010G275700 Sobic004G069000--Sobic003G271400 Sobic001G528800 Sobic001G528800 Sobic004G069000--Sobic001G528800 Sobic001G345100 Sobic001G345100 Sobic004G069000--Sobic001G345100 Sobic008G033000 Sobic008G033000 Sobic004G069000--Sobic008G033000 Sobic004G069000--Sobic005G206500 Sobic010G085100 Sobic010G085100 Sobic004G069000--Sobic010G085100 Sobic007G136200 Sobic007G136200 Sobic004G069000--Sobic007G136200 Sobic001G536700 Sobic001G536700 Sobic004G069000--Sobic001G536700 Sobic001G378100 Sobic001G378100 Sobic004G069000--Sobic001G378100 Sobic001G017300 Sobic001G017300 Sobic010G249700--Sobic001G017300 Sobic010G249700--Sobic005G101200 Sobic007G105500 Sobic007G105500 Sobic010G249700--Sobic007G105500 Sobic006G093800 Sobic006G093800 Sobic010G249700--Sobic006G093800 Sobic009G256100 Sobic009G256100 Sobic010G249700--Sobic009G256100 Sobic010G255300 Sobic010G255300 Sobic010G249700--Sobic010G255300 Sobic003G282000 Sobic003G282000 Sobic010G249700--Sobic003G282000 Sobic002G382700 Sobic002G382700 Sobic010G249700--Sobic002G382700 Sobic004G356400 Sobic004G356400 Sobic010G249700--Sobic004G356400 Sobic003G269300 Sobic003G269300 Sobic008G064700--Sobic003G269300 Sobic003G228300 Sobic003G228300 Sobic008G064700--Sobic003G228300 Sobic008G064700--Sobic002G382700 Sobic006G221000 Sobic006G221000 Sobic008G064700--Sobic006G221000 Sobic001G485100 Sobic001G485100 Sobic008G064700--Sobic001G485100 Sobic008G064700--Sobic010G249700 Sobic001G046000 Sobic001G046000 Sobic008G064700--Sobic001G046000 Sobic001G283100 Sobic001G283100 Sobic008G064700--Sobic001G283100 Sobic001G207800 Sobic001G207800 Sobic008G064700--Sobic001G207800 Sobic007G227100 Sobic007G227100 Sobic003G271400--Sobic007G227100 Sobic004G312600 Sobic004G312600 Sobic003G271400--Sobic004G312600 Sobic003G271400--Sobic004G069000 Sobic003G003450 Sobic003G003450 Sobic003G271400--Sobic003G003450 Sobic004G337400 Sobic004G337400 Sobic003G271400--Sobic004G337400 Sobic004G127800 Sobic004G127800 Sobic003G271400--Sobic004G127800 Sobic008G038500 Sobic008G038500 Sobic003G271400--Sobic008G038500 Sobic004G151300 Sobic004G151300 Sobic003G271400--Sobic004G151300 Sobic010G150100 Sobic010G150100 Sobic003G271400--Sobic010G150100 Sobic004G189800 Sobic004G189800 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic005G101200--Sobic002G404800 Sobic001G258200 Sobic001G258200 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic003G185900 Sobic003G185900 Sobic005G101200--Sobic003G185900 Sobic005G101200--Sobic010G085100 Sobic005G101200--Sobic004G281800 Sobic002G306800 Sobic002G306800 Sobic003G028900--Sobic002G306800 Sobic003G028900--Sobic002G382700 Sobic003G028900--Sobic001G207800 Sobic003G028900--Sobic004G356400 Sobic003G028900--Sobic007G136200 Sobic001G303200 Sobic001G303200 Sobic003G028900--Sobic001G303200 Sobic003G028900--Sobic005G206500 Sobic003G028900--Sobic010G249700 Sobic003G028900--Sobic001G258200 Sobic004G281800--Sobic009G038900 Sobic004G281800--Sobic005G101200 Sobic001G352400 Sobic001G352400 Sobic004G281800--Sobic001G352400 Sobic004G281800--Sobic010G275700 Sobic004G281800--Sobic003G021100 Sobic004G281800--Sobic002G382700 Sobic005G106600 Sobic005G106600 Sobic004G281800--Sobic005G106600 Sobic004G281800--Sobic004G312600 Sobic003G220100 Sobic003G220100 Sobic004G281800--Sobic003G220100 Sobic003G021100--Sobic010G275700 Sobic003G021100--Sobic005G101200 Sobic003G021100--Sobic004G281800 Sobic003G021100--Sobic004G189800 Sobic003G021100--Sobic009G038900 Sobic010G251700 Sobic010G251700 Sobic003G021100--Sobic010G251700 Sobic003G021100--Sobic010G085100 Sobic004G027600 Sobic004G027600 Sobic003G021100--Sobic004G027600 Sobic008G130000 Sobic008G130000 Sobic003G021100--Sobic008G130000 Sobic010G275700--Sobic003G021100 Sobic010G275700--Sobic005G101200 Sobic010G275700--Sobic004G281800 Sobic010G275700--Sobic001G352400 Sobic010G275700--Sobic004G189800 Sobic010G275700--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic010G275700--Sobic001G333800 Sobic002G119100 Sobic002G119100 Sobic010G275700--Sobic002G119100 Sobic010G275700--Sobic009G038900
Octagon: transcription factors


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