Gene annotation
Transcriptome id Sobic.005G217000.5,Sobic.005G217000.6,Sobic.005G217000.1,Sobic.005G217000.3,Sobic.005G217000.4
Synonym ATSFR2, SFR2, Sb05g026810
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Os11bglu36 SFR2 homologue, expressed
UniProt A0A1Z5RKB5 , A0A1B6PU06
Pfam PF00150 PF00232
Panther DB PTHR10353 PTHR10353:SF33
NCBI CDD KOG0626; Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G06510 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os11g45710.2,LOC_Os11g45710.1,LOC_Os11g45710.4 : Os11bglu36 SFR2 homologue, expressed
MaizeGDB (Corn) Zm00025a015957
Brachypodium KQJ87231
Barley HORVU4Hr1G028910.5 , HORVU4Hr1G028910.12 , HORVU4Hr1G028910.8 , HORVU4Hr1G028910.9 , HORVU4Hr1G028910.6 , HORVU4Hr1G028910.7 , HORVU4Hr1G028910.4 , HORVU4Hr1G028910.2 , HORVU4Hr1G028910.3 , HORVU4Hr1G028910.1 , HORVU4Hr1G028910.14 , HORVU4Hr1G028910.10 , HORVU4Hr1G028910.11 , HORVU4Hr1G028910.13
Wheat TraesCS4D02G143200 , TraesCS4A02G172000 , TraesCSU02G240500
Populus -


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cDNA sequences
Sobic.005G217000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
2 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
5 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
6 Sobic.001G077300 thioredoxin, putative, expressed -
7 Sobic.001G345100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
8 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
9 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
10 Sobic.003G409700 rieske domain containing protein, expressed -
11 Sobic.001G207800 integral membrane protein, putative, expressed -
12 Sobic.007G227100 expressed protein -
13 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
14 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
18 Sobic.003G047700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
19 Sobic.003G314000 jacalin-like lectin domain containing protein, expressed -
20 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -


Gene co-expression network
sample Sobic005G217000 Sobic005G217000 Sobic006G235400 Sobic006G235400 Sobic005G217000--Sobic006G235400 Sobic008G129900 Sobic008G129900 Sobic005G217000--Sobic008G129900 Sobic003G341300 Sobic003G341300 Sobic005G217000--Sobic003G341300 Sobic002G382700 Sobic002G382700 Sobic005G217000--Sobic002G382700 Sobic002G162400 Sobic002G162400 Sobic005G217000--Sobic002G162400 Sobic001G077300 Sobic001G077300 Sobic005G217000--Sobic001G077300 Sobic001G345100 Sobic001G345100 Sobic005G217000--Sobic001G345100 Sobic002G119100 Sobic002G119100 Sobic005G217000--Sobic002G119100 Sobic006G090100 Sobic006G090100 Sobic005G217000--Sobic006G090100 Sobic010G231300 Sobic010G231300 Sobic006G235400--Sobic010G231300 Sobic006G235400--Sobic001G077300 Sobic004G128900 Sobic004G128900 Sobic006G235400--Sobic004G128900 Sobic006G235400--Sobic003G341300 Sobic003G409700 Sobic003G409700 Sobic006G235400--Sobic003G409700 Sobic006G235400--Sobic008G129900 Sobic006G161500 Sobic006G161500 Sobic006G235400--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic006G235400--Sobic003G380200 Sobic001G180200 Sobic001G180200 Sobic006G235400--Sobic001G180200 Sobic008G129900--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic008G129900--Sobic008G033000 Sobic001G258200 Sobic001G258200 Sobic008G129900--Sobic001G258200 Sobic001G217900 Sobic001G217900 Sobic008G129900--Sobic001G217900 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic002G206300 Sobic002G206300 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300 Sobic003G341300--Sobic001G180200 Sobic007G157300 Sobic007G157300 Sobic003G341300--Sobic007G157300 Sobic001G283100 Sobic001G283100 Sobic003G341300--Sobic001G283100 Sobic003G341300--Sobic003G409700 Sobic003G341300--Sobic006G235400 Sobic003G341300--Sobic002G162400 Sobic003G341300--Sobic001G077300 Sobic003G341300--Sobic006G090100 Sobic003G094100 Sobic003G094100 Sobic003G341300--Sobic003G094100 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic002G382700--Sobic001G258200 Sobic002G382700--Sobic006G090100 Sobic002G382700--Sobic003G341300 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic002G382700--Sobic001G077300 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic002G162400--Sobic003G341300 Sobic002G162400--Sobic001G263100 Sobic002G162400--Sobic001G180200 Sobic002G162400--Sobic002G206300 Sobic002G162400--Sobic010G231300 Sobic002G162400--Sobic006G235400 Sobic002G162400--Sobic001G077300 Sobic002G162400--Sobic001G258200 Sobic002G162400--Sobic008G129900 Sobic009G073900 Sobic009G073900 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic004G143300 Sobic004G143300 Sobic001G345100--Sobic004G143300 Sobic001G345100--Sobic007G058100 Sobic001G536700 Sobic001G536700 Sobic001G345100--Sobic001G536700 Sobic001G345100--Sobic008G129900 Sobic001G345100--Sobic010G231300 Sobic001G345100--Sobic008G033000 Sobic001G345100--Sobic006G235400 Sobic001G345100--Sobic001G263100 Sobic001G345100--Sobic001G258200 Sobic009G194500 Sobic009G194500 Sobic002G119100--Sobic009G194500 Sobic004G322600 Sobic004G322600 Sobic002G119100--Sobic004G322600 Sobic002G119100--Sobic006G161500 Sobic008G038500 Sobic008G038500 Sobic002G119100--Sobic008G038500 Sobic002G119100--Sobic004G127800 Sobic001G244600 Sobic001G244600 Sobic002G119100--Sobic001G244600 Sobic004G322700 Sobic004G322700 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G293500 Sobic002G293500 Sobic002G119100--Sobic002G293500 Sobic006G090100--Sobic001G207800 Sobic006G090100--Sobic001G283100 Sobic006G090100--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic006G090100--Sobic001G509200 Sobic006G090100--Sobic009G073900 Sobic006G090100--Sobic002G382700 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic002G081400 Sobic002G081400 Sobic006G090100--Sobic002G081400
Octagon: transcription factors


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