Gene annotation
Transcriptome id Sobic.004G151300.5,Sobic.004G151300.4,Sobic.004G151300.1
Synonym Sb04g020130
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF803 domain containing, putative, expressed
UniProt C5XSH6
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF15
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT1G71900 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os04g30450.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a020370
Brachypodium PNT68655 , PNT68657 , PNT68656 , PNT68658 , PNT60857 , PNT60856 , PNT60855 , PNT60858 , KQJ82167 , KQJ82166 , KQJ99545
Barley HORVU6Hr1G042410.19 , HORVU6Hr1G042410.18 , HORVU6Hr1G042410.15 , HORVU6Hr1G042410.14 , HORVU6Hr1G042410.17 , HORVU6Hr1G042410.16 , HORVU6Hr1G042410.11 , HORVU6Hr1G042410.10 , HORVU6Hr1G042410.13 , HORVU6Hr1G042410.12 , HORVU2Hr1G068050.14 , HORVU2Hr1G068050.11 , HORVU2Hr1G068050.10 , HORVU2Hr1G068050.12 , HORVU2Hr1G068050.1 , HORVU2Hr1G068050.3 , HORVU2Hr1G068050.2 , HORVU2Hr1G068050.5 , HORVU2Hr1G068050.6 , HORVU2Hr1G068050.8 , HORVU6Hr1G042410.33 , HORVU6Hr1G042410.32 , HORVU6Hr1G042410.31 , HORVU6Hr1G042410.30 , HORVU6Hr1G042410.35 , HORVU6Hr1G042410.34 , HORVU6Hr1G042410.28 , HORVU6Hr1G042410.29 , HORVU6Hr1G042410.20 , HORVU6Hr1G042410.21 , HORVU6Hr1G042410.22 , HORVU6Hr1G042410.23 , HORVU6Hr1G042410.24 , HORVU6Hr1G042410.26 , HORVU6Hr1G042410.27 , HORVU6Hr1G042410.9 , HORVU6Hr1G042410.8 , HORVU6Hr1G042410.1 , HORVU6Hr1G042410.3 , HORVU6Hr1G042410.2 , HORVU6Hr1G042410.5 , HORVU6Hr1G042410.4 , HORVU6Hr1G042410.7 , HORVU6Hr1G042410.6
Wheat TraesCS6A02G189200 , TraesCS2B02G295700 , TraesCS6D02G177800 , TraesCS2D02G277100 , TraesCS2A02G278100 , TraesCS6B02G215400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G150100 expressed protein -
2 Sobic.008G167600 VTC2, putative, expressed -
3 Sobic.001G345100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
4 Sobic.006G090100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K09919: uncharacterized protein
5 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
6 Sobic.001G207800 integral membrane protein, putative, expressed -
7 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
8 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
9 Sobic.007G227100 expressed protein -
10 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
11 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
12 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
14 Sobic.003G271400 chloride transporter, chloride channel family, putative, expressed -
15 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
16 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
17 Sobic.003G003450 - K01177: beta-amylase
18 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G153900 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
20 Sobic.004G143300 high mobility group, putative, expressed -


Gene co-expression network
sample Sobic004G151300 Sobic004G151300 Sobic010G150100 Sobic010G150100 Sobic004G151300--Sobic010G150100 Sobic008G167600 Sobic008G167600 Sobic004G151300--Sobic008G167600 Sobic001G345100 Sobic001G345100 Sobic004G151300--Sobic001G345100 Sobic006G090100 Sobic006G090100 Sobic004G151300--Sobic006G090100 Sobic004G312600 Sobic004G312600 Sobic004G151300--Sobic004G312600 Sobic001G207800 Sobic001G207800 Sobic004G151300--Sobic001G207800 Sobic001G331600 Sobic001G331600 Sobic004G151300--Sobic001G331600 Sobic002G382700 Sobic002G382700 Sobic004G151300--Sobic002G382700 Sobic007G227100 Sobic007G227100 Sobic004G151300--Sobic007G227100 Sobic010G150100--Sobic004G151300 Sobic010G150100--Sobic004G312600 Sobic010G150100--Sobic001G331600 Sobic010G150100--Sobic001G345100 Sobic004G143300 Sobic004G143300 Sobic010G150100--Sobic004G143300 Sobic004G127800 Sobic004G127800 Sobic010G150100--Sobic004G127800 Sobic002G043800 Sobic002G043800 Sobic010G150100--Sobic002G043800 Sobic010G150100--Sobic007G227100 Sobic003G003450 Sobic003G003450 Sobic010G150100--Sobic003G003450 Sobic006G257800 Sobic006G257800 Sobic008G167600--Sobic006G257800 Sobic008G167600--Sobic004G151300 Sobic002G291800 Sobic002G291800 Sobic008G167600--Sobic002G291800 Sobic008G167600--Sobic004G312600 Sobic008G167600--Sobic004G127800 Sobic002G293500 Sobic002G293500 Sobic008G167600--Sobic002G293500 Sobic002G081400 Sobic002G081400 Sobic008G167600--Sobic002G081400 Sobic008G167600--Sobic006G090100 Sobic001G333800 Sobic001G333800 Sobic008G167600--Sobic001G333800 Sobic001G345100--Sobic004G143300 Sobic007G058100 Sobic007G058100 Sobic001G345100--Sobic007G058100 Sobic001G536700 Sobic001G536700 Sobic001G345100--Sobic001G536700 Sobic008G129900 Sobic008G129900 Sobic001G345100--Sobic008G129900 Sobic010G231300 Sobic010G231300 Sobic001G345100--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic001G345100--Sobic008G033000 Sobic006G235400 Sobic006G235400 Sobic001G345100--Sobic006G235400 Sobic001G263100 Sobic001G263100 Sobic001G345100--Sobic001G263100 Sobic001G258200 Sobic001G258200 Sobic001G345100--Sobic001G258200 Sobic006G090100--Sobic001G207800 Sobic001G283100 Sobic001G283100 Sobic006G090100--Sobic001G283100 Sobic001G077300 Sobic001G077300 Sobic006G090100--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic006G090100--Sobic001G509200 Sobic009G073900 Sobic009G073900 Sobic006G090100--Sobic009G073900 Sobic006G090100--Sobic002G382700 Sobic003G341300 Sobic003G341300 Sobic006G090100--Sobic003G341300 Sobic001G046000 Sobic001G046000 Sobic006G090100--Sobic001G046000 Sobic006G090100--Sobic002G081400 Sobic004G312600--Sobic007G227100 Sobic004G312600--Sobic004G127800 Sobic008G038500 Sobic008G038500 Sobic004G312600--Sobic008G038500 Sobic004G312600--Sobic001G331600 Sobic004G312600--Sobic002G382700 Sobic004G312600--Sobic002G293500 Sobic004G312600--Sobic001G077300 Sobic005G106600 Sobic005G106600 Sobic004G312600--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic004G312600--Sobic003G220100 Sobic001G207800--Sobic006G090100 Sobic001G207800--Sobic001G283100 Sobic001G207800--Sobic002G382700 Sobic001G207800--Sobic001G509200 Sobic001G207800--Sobic001G077300 Sobic007G108900 Sobic007G108900 Sobic001G207800--Sobic007G108900 Sobic001G207800--Sobic009G073900 Sobic001G207800--Sobic003G341300 Sobic007G157300 Sobic007G157300 Sobic001G207800--Sobic007G157300 Sobic001G485100 Sobic001G485100 Sobic001G331600--Sobic001G485100 Sobic004G128900 Sobic004G128900 Sobic001G331600--Sobic004G128900 Sobic004G153900 Sobic004G153900 Sobic001G331600--Sobic004G153900 Sobic002G161400 Sobic002G161400 Sobic001G331600--Sobic002G161400 Sobic001G331600--Sobic001G046000 Sobic001G331600--Sobic004G312600 Sobic001G331600--Sobic007G227100 Sobic006G191500 Sobic006G191500 Sobic001G331600--Sobic006G191500 Sobic004G344600 Sobic004G344600 Sobic001G331600--Sobic004G344600 Sobic002G382700--Sobic001G207800 Sobic002G382700--Sobic001G258200 Sobic002G382700--Sobic006G090100 Sobic002G382700--Sobic003G341300 Sobic002G382700--Sobic001G283100 Sobic002G382700--Sobic007G058100 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic002G382700--Sobic007G227100 Sobic007G227100--Sobic004G312600 Sobic007G227100--Sobic004G127800 Sobic007G227100--Sobic001G077300 Sobic007G227100--Sobic001G331600 Sobic007G227100--Sobic008G038500 Sobic007G227100--Sobic002G382700 Sobic007G227100--Sobic006G235400 Sobic007G227100--Sobic003G341300 Sobic007G227100--Sobic001G485100
Octagon: transcription factors


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