Gene annotation
Transcriptome id Sobic.004G153900.2,Sobic.004G153900.3,Sobic.004G153900.4
Synonym ATTPS21, TPS21
Functional annotation terpene synthase, putative, expressed
UniProt A0A1Z5RMS9 , A0A1Z5RNE2
Pfam PF03936 PF01397 PF03936
Panther DB PTHR31225
NCBI CDD -
KEGG Orthology K15803; (-)-germacrene D synthase
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding GO:0016829lyase activity GO:0010333terpene synthase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G23960 : terpene synthase 21
RAP-DB (Rice) LOC_Os01g23530.1,LOC_Os08g04500.2 : terpene synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
2 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
3 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
4 Sobic.001G046000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
6 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
7 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.008G149100 B3 DNA binding domain containing protein, expressed -
9 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
10 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
11 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
12 Sobic.003G304300 expressed protein -
13 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
15 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
16 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
17 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
18 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
20 Sobic.007G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid synthesis regulator CarF, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant


Gene co-expression network
sample Sobic004G153900 Sobic004G153900 Sobic004G128900 Sobic004G128900 Sobic004G153900--Sobic004G128900 Sobic002G161400 Sobic002G161400 Sobic004G153900--Sobic002G161400 Sobic010G104700 Sobic010G104700 Sobic004G153900--Sobic010G104700 Sobic001G046000 Sobic001G046000 Sobic004G153900--Sobic001G046000 Sobic001G331600 Sobic001G331600 Sobic004G153900--Sobic001G331600 Sobic006G191500 Sobic006G191500 Sobic004G153900--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic004G153900--Sobic001G485100 Sobic008G149100 Sobic008G149100 Sobic004G153900--Sobic008G149100 Sobic004G344600 Sobic004G344600 Sobic004G153900--Sobic004G344600 Sobic004G128900--Sobic002G161400 Sobic004G128900--Sobic004G153900 Sobic004G128900--Sobic006G191500 Sobic006G235400 Sobic006G235400 Sobic004G128900--Sobic006G235400 Sobic006G161500 Sobic006G161500 Sobic004G128900--Sobic006G161500 Sobic004G128900--Sobic004G344600 Sobic003G380200 Sobic003G380200 Sobic004G128900--Sobic003G380200 Sobic004G128900--Sobic001G331600 Sobic004G128900--Sobic001G485100 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic003G304300 Sobic003G304300 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic002G161400--Sobic004G153900 Sobic003G339200 Sobic003G339200 Sobic002G161400--Sobic003G339200 Sobic002G161400--Sobic003G380200 Sobic001G112900 Sobic001G112900 Sobic002G161400--Sobic001G112900 Sobic010G104700--Sobic001G046000 Sobic010G104700--Sobic003G304300 Sobic010G101000 Sobic010G101000 Sobic010G104700--Sobic010G101000 Sobic010G104700--Sobic004G344600 Sobic010G104700--Sobic004G153900 Sobic009G225600 Sobic009G225600 Sobic010G104700--Sobic009G225600 Sobic010G104700--Sobic002G161400 Sobic008G180800 Sobic008G180800 Sobic010G104700--Sobic008G180800 Sobic002G351200 Sobic002G351200 Sobic010G104700--Sobic002G351200 Sobic001G046000--Sobic009G225600 Sobic001G046000--Sobic001G485100 Sobic001G046000--Sobic010G104700 Sobic002G047400 Sobic002G047400 Sobic001G046000--Sobic002G047400 Sobic003G186800 Sobic003G186800 Sobic001G046000--Sobic003G186800 Sobic001G046000--Sobic010G101000 Sobic006G090100 Sobic006G090100 Sobic001G046000--Sobic006G090100 Sobic001G046000--Sobic004G153900 Sobic001G046000--Sobic006G191500 Sobic001G331600--Sobic001G485100 Sobic001G331600--Sobic004G128900 Sobic001G331600--Sobic004G153900 Sobic001G331600--Sobic002G161400 Sobic001G331600--Sobic001G046000 Sobic004G312600 Sobic004G312600 Sobic001G331600--Sobic004G312600 Sobic007G227100 Sobic007G227100 Sobic001G331600--Sobic007G227100 Sobic001G331600--Sobic006G191500 Sobic001G331600--Sobic004G344600 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic006G191500--Sobic001G485100 Sobic006G191500--Sobic003G304300 Sobic006G191500--Sobic004G128900 Sobic006G191500--Sobic004G344600 Sobic006G191500--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic006G191500--Sobic010G100900 Sobic006G191500--Sobic001G046000 Sobic001G485100--Sobic006G191500 Sobic001G485100--Sobic002G161400 Sobic001G485100--Sobic003G380200 Sobic001G485100--Sobic003G186800 Sobic001G485100--Sobic001G046000 Sobic001G485100--Sobic001G331600 Sobic003G228300 Sobic003G228300 Sobic001G485100--Sobic003G228300 Sobic001G485100--Sobic009G225600 Sobic001G485100--Sobic004G344600 Sobic008G149100--Sobic002G047400 Sobic008G149100--Sobic001G046000 Sobic001G499100 Sobic001G499100 Sobic008G149100--Sobic001G499100 Sobic008G149100--Sobic003G228300 Sobic001G509200 Sobic001G509200 Sobic008G149100--Sobic001G509200 Sobic008G149100--Sobic004G153900 Sobic008G149100--Sobic010G104700 Sobic001G393300 Sobic001G393300 Sobic008G149100--Sobic001G393300 Sobic008G149100--Sobic010G101000 Sobic004G344600--Sobic002G161400 Sobic004G344600--Sobic001G112900 Sobic004G344600--Sobic003G339200 Sobic004G344600--Sobic003G304300 Sobic004G344600--Sobic006G191500 Sobic004G344600--Sobic010G104700 Sobic004G344600--Sobic001G485100 Sobic004G344600--Sobic004G128900 Sobic009G246400 Sobic009G246400 Sobic004G344600--Sobic009G246400
Octagon: transcription factors


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