Gene annotation
Transcriptome id Sobic.004G189800.1,Sobic.004G189800.2
Synonym ATATH13, Sb04g023800, ATOSA1, OSA1, ATH13
Functional annotation ABC1 family domain containing protein, putative, expressed
UniProt A0A1Z5RN73 , C5XVP4
Pfam PF03109
Panther DB PTHR10566 PTHR10566:SF74
NCBI CDD KOG1235; Predicted unusual protein kinase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64940 : ABC2 homolog 13
RAP-DB (Rice) LOC_Os02g36570.1 : ABC1 family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a020792 , Zm00025a011806
Brachypodium KQK00012
Barley HORVU6Hr1G049050.14 , HORVU6Hr1G049050.11 , HORVU6Hr1G049050.12 , HORVU6Hr1G049050.13 , HORVU6Hr1G049050.4 , HORVU6Hr1G049050.5 , HORVU6Hr1G049050.6 , HORVU6Hr1G049050.7 , HORVU6Hr1G049050.1 , HORVU6Hr1G049050.2 , HORVU6Hr1G049050.3 , HORVU6Hr1G049050.8 , HORVU6Hr1G049050.9
Wheat TraesCS6A02G203700 , TraesCS6D02G186800 , TraesCS6D02G186800 , TraesCS6B02G223600 , TraesCS6B02G223600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
2 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.004G027600 expressed protein -
4 Sobic.009G256100 expressed protein -
5 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
6 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
7 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
8 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
9 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
10 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
11 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
12 Sobic.001G359300 cytochrome P450, putative, expressed -
13 Sobic.009G038701 - -
14 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
15 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
16 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G021100 expressed protein -
19 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -


Gene co-expression network
sample Sobic004G189800 Sobic004G189800 Sobic005G101200 Sobic005G101200 Sobic004G189800--Sobic005G101200 Sobic001G258200 Sobic001G258200 Sobic004G189800--Sobic001G258200 Sobic004G027600 Sobic004G027600 Sobic004G189800--Sobic004G027600 Sobic009G256100 Sobic009G256100 Sobic004G189800--Sobic009G256100 Sobic003G185900 Sobic003G185900 Sobic004G189800--Sobic003G185900 Sobic005G068700 Sobic005G068700 Sobic004G189800--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic004G189800--Sobic002G404800 Sobic002G382700 Sobic002G382700 Sobic004G189800--Sobic002G382700 Sobic008G033000 Sobic008G033000 Sobic004G189800--Sobic008G033000 Sobic005G101200--Sobic004G189800 Sobic005G101200--Sobic005G068700 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic007G105500 Sobic007G105500 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic010G085100 Sobic010G085100 Sobic005G101200--Sobic010G085100 Sobic004G281800 Sobic004G281800 Sobic005G101200--Sobic004G281800 Sobic001G258200--Sobic003G185900 Sobic001G258200--Sobic002G382700 Sobic008G129900 Sobic008G129900 Sobic001G258200--Sobic008G129900 Sobic001G504400 Sobic001G504400 Sobic001G258200--Sobic001G504400 Sobic001G258200--Sobic004G189800 Sobic001G258200--Sobic008G033000 Sobic002G206300 Sobic002G206300 Sobic001G258200--Sobic002G206300 Sobic001G359300 Sobic001G359300 Sobic001G258200--Sobic001G359300 Sobic001G258200--Sobic005G068700 Sobic004G027600--Sobic004G189800 Sobic004G027600--Sobic003G185900 Sobic010G251700 Sobic010G251700 Sobic004G027600--Sobic010G251700 Sobic004G112100 Sobic004G112100 Sobic004G027600--Sobic004G112100 Sobic009G237100 Sobic009G237100 Sobic004G027600--Sobic009G237100 Sobic010G067100 Sobic010G067100 Sobic004G027600--Sobic010G067100 Sobic004G027600--Sobic010G085100 Sobic004G027600--Sobic001G258200 Sobic004G027600--Sobic005G101200 Sobic010G104800 Sobic010G104800 Sobic009G256100--Sobic010G104800 Sobic006G153400 Sobic006G153400 Sobic009G256100--Sobic006G153400 Sobic002G390100 Sobic002G390100 Sobic009G256100--Sobic002G390100 Sobic007G058100 Sobic007G058100 Sobic009G256100--Sobic007G058100 Sobic009G256100--Sobic007G105500 Sobic009G256100--Sobic002G404800 Sobic009G256100--Sobic003G185900 Sobic004G215800 Sobic004G215800 Sobic009G256100--Sobic004G215800 Sobic009G256100--Sobic008G129900 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic003G185900--Sobic010G067100 Sobic003G185900--Sobic007G105500 Sobic003G185900--Sobic004G215800 Sobic003G185900--Sobic005G068700 Sobic009G038701 Sobic009G038701 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic005G068700--Sobic001G258200 Sobic005G068700--Sobic005G101200 Sobic005G068700--Sobic003G185900 Sobic002G056500 Sobic002G056500 Sobic005G068700--Sobic002G056500 Sobic005G068700--Sobic008G129900 Sobic005G068700--Sobic008G033000 Sobic001G217900 Sobic001G217900 Sobic005G068700--Sobic001G217900 Sobic005G068700--Sobic002G390100 Sobic005G068700--Sobic002G206300 Sobic002G404800--Sobic007G105500 Sobic002G404800--Sobic003G036200 Sobic002G404800--Sobic004G215800 Sobic002G404800--Sobic005G101200 Sobic002G404800--Sobic002G390100 Sobic002G404800--Sobic009G256100 Sobic002G404800--Sobic003G185900 Sobic002G404800--Sobic008G033000 Sobic002G404800--Sobic004G112100 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic003G341300 Sobic003G341300 Sobic002G382700--Sobic003G341300 Sobic001G283100 Sobic001G283100 Sobic002G382700--Sobic001G283100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic007G227100 Sobic007G227100 Sobic002G382700--Sobic007G227100 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701
Octagon: transcription factors


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