Gene annotation
Transcriptome id Sobic.003G385100.3,Sobic.003G385100.5,Sobic.003G385100.4,Sobic.003G385100.2
Synonym BT3, Sb03g042420
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
BTBZ1 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed
UniProt C5XES2
Pfam PF02135 PF00651
Panther DB PTHR24413 PTHR24413:SF129
NCBI CDD KOG1778; CREB binding protein/P300 and related TAZ Zn-finger proteins
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus GO:0004402histone acetyltransferase activity GO:0003712transcription coregulator activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G67480 : BTB and TAZ domain protein 4
RAP-DB (Rice) LOC_Os01g66890.1 : BTBZ1 - Bric-a-Brac, Tramtrack, and Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed
MaizeGDB (Corn) Zm00025a026468 , Zm00025a051624
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G385100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
2 Sobic.008G038500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease III-like protein 1, putative, expressed K10773: endonuclease III
3 Sobic.004G322700 - -
4 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
5 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
6 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
7 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
8 Sobic.010G131700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCttP3 - Putative C-terminal processing peptidase homologue, expressed -
9 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -
11 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
12 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G331600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
15 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
16 Sobic.007G227100 expressed protein -
17 Sobic.004G153900 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
18 Sobic.009G100700 - -
19 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
20 Sobic.003G271400 chloride transporter, chloride channel family, putative, expressed -


Gene co-expression network
sample Sobic003G385100 Sobic003G385100 Sobic002G293500 Sobic002G293500 Sobic003G385100--Sobic002G293500 Sobic008G038500 Sobic008G038500 Sobic003G385100--Sobic008G038500 Sobic004G322700 Sobic004G322700 Sobic003G385100--Sobic004G322700 Sobic004G151300 Sobic004G151300 Sobic003G385100--Sobic004G151300 Sobic004G312600 Sobic004G312600 Sobic003G385100--Sobic004G312600 Sobic004G322600 Sobic004G322600 Sobic003G385100--Sobic004G322600 Sobic002G119100 Sobic002G119100 Sobic003G385100--Sobic002G119100 Sobic010G131700 Sobic010G131700 Sobic003G385100--Sobic010G131700 Sobic001G352400 Sobic001G352400 Sobic003G385100--Sobic001G352400 Sobic004G153900 Sobic004G153900 Sobic002G293500--Sobic004G153900 Sobic001G046000 Sobic001G046000 Sobic002G293500--Sobic001G046000 Sobic002G161400 Sobic002G161400 Sobic002G293500--Sobic002G161400 Sobic001G331600 Sobic001G331600 Sobic002G293500--Sobic001G331600 Sobic002G293500--Sobic004G312600 Sobic004G127800 Sobic004G127800 Sobic002G293500--Sobic004G127800 Sobic007G227100 Sobic007G227100 Sobic002G293500--Sobic007G227100 Sobic002G293500--Sobic010G131700 Sobic001G485100 Sobic001G485100 Sobic002G293500--Sobic001G485100 Sobic008G038500--Sobic004G312600 Sobic008G038500--Sobic007G227100 Sobic009G194500 Sobic009G194500 Sobic008G038500--Sobic009G194500 Sobic008G038500--Sobic002G119100 Sobic008G038500--Sobic004G322600 Sobic002G382700 Sobic002G382700 Sobic008G038500--Sobic002G382700 Sobic007G058100 Sobic007G058100 Sobic008G038500--Sobic007G058100 Sobic001G244600 Sobic001G244600 Sobic008G038500--Sobic001G244600 Sobic008G038500--Sobic004G322700 Sobic004G322700--Sobic004G322600 Sobic004G322700--Sobic002G382700 Sobic004G322700--Sobic008G038500 Sobic004G322700--Sobic002G119100 Sobic004G322700--Sobic001G244600 Sobic004G322700--Sobic001G331600 Sobic004G322700--Sobic004G312600 Sobic004G322700--Sobic007G058100 Sobic004G322700--Sobic007G227100 Sobic010G150100 Sobic010G150100 Sobic004G151300--Sobic010G150100 Sobic008G167600 Sobic008G167600 Sobic004G151300--Sobic008G167600 Sobic001G345100 Sobic001G345100 Sobic004G151300--Sobic001G345100 Sobic006G090100 Sobic006G090100 Sobic004G151300--Sobic006G090100 Sobic004G151300--Sobic004G312600 Sobic001G207800 Sobic001G207800 Sobic004G151300--Sobic001G207800 Sobic004G151300--Sobic001G331600 Sobic004G151300--Sobic002G382700 Sobic004G151300--Sobic007G227100 Sobic004G312600--Sobic007G227100 Sobic004G312600--Sobic004G127800 Sobic004G312600--Sobic008G038500 Sobic004G312600--Sobic001G331600 Sobic004G312600--Sobic002G382700 Sobic004G312600--Sobic002G293500 Sobic001G077300 Sobic001G077300 Sobic004G312600--Sobic001G077300 Sobic005G106600 Sobic005G106600 Sobic004G312600--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic004G312600--Sobic003G220100 Sobic004G322600--Sobic004G322700 Sobic004G322600--Sobic002G119100 Sobic006G161500 Sobic006G161500 Sobic004G322600--Sobic006G161500 Sobic004G322600--Sobic009G194500 Sobic004G035100 Sobic004G035100 Sobic004G322600--Sobic004G035100 Sobic004G322600--Sobic008G038500 Sobic004G322600--Sobic001G331600 Sobic004G322600--Sobic007G227100 Sobic004G322600--Sobic001G244600 Sobic002G119100--Sobic009G194500 Sobic002G119100--Sobic004G322600 Sobic002G119100--Sobic006G161500 Sobic002G119100--Sobic008G038500 Sobic002G119100--Sobic004G127800 Sobic002G119100--Sobic001G244600 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G119100--Sobic002G293500 Sobic010G131700--Sobic002G293500 Sobic010G131700--Sobic004G127800 Sobic005G095000 Sobic005G095000 Sobic010G131700--Sobic005G095000 Sobic010G131700--Sobic008G038500 Sobic010G131700--Sobic002G119100 Sobic010G131700--Sobic006G090100 Sobic001G359300 Sobic001G359300 Sobic010G131700--Sobic001G359300 Sobic010G131700--Sobic007G227100 Sobic010G131700--Sobic009G194500 Sobic004G281800 Sobic004G281800 Sobic001G352400--Sobic004G281800 Sobic010G275700 Sobic010G275700 Sobic001G352400--Sobic010G275700 Sobic001G352400--Sobic002G382700 Sobic001G352400--Sobic004G322700 Sobic001G352400--Sobic002G119100 Sobic001G352400--Sobic008G038500 Sobic005G101200 Sobic005G101200 Sobic001G352400--Sobic005G101200 Sobic004G169000 Sobic004G169000 Sobic001G352400--Sobic004G169000 Sobic009G038900 Sobic009G038900 Sobic001G352400--Sobic009G038900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.