Gene annotation
Transcriptome id Sobic.010G074300.1
Synonym Sb10g006500, CID7
Functional annotation smr domain containing protein, expressed
UniProt C5Z605
Pfam PF07145 PF01713 PF08590
Panther DB PTHR13308
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26280 : CTC-interacting domain 7
RAP-DB (Rice) LOC_Os06g09890.4 : smr domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049668 , Zm00025a042445
Brachypodium KQK19134
Barley HORVU7Hr1G034080.18 , HORVU7Hr1G034080.19 , HORVU7Hr1G034080.14 , HORVU7Hr1G034080.15 , HORVU7Hr1G034080.16 , HORVU7Hr1G034080.17 , HORVU7Hr1G034080.10 , HORVU7Hr1G034080.11 , HORVU7Hr1G034080.12 , HORVU7Hr1G034080.13 , HORVU7Hr1G034080.6 , HORVU7Hr1G034080.7 , HORVU7Hr1G034080.4 , HORVU7Hr1G034080.5 , HORVU7Hr1G034080.2 , HORVU7Hr1G034080.3 , HORVU7Hr1G034080.1 , HORVU7Hr1G034080.8 , HORVU7Hr1G034080.9
Wheat TraesCS7B02G067300 , TraesCS7B02G067300 , TraesCS7D02G163600 , TraesCS7D02G163600 , TraesCS7A02G162000 , TraesCS7A02G162000
Populus -


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cDNA sequences
Sobic.010G074300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
2 Sobic.004G118200 reticulon domain containing protein, putative, expressed -
3 Sobic.007G190000 expressed protein -
4 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
5 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.010G131900 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
7 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.003G316500 expressed protein -
9 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.003G372500 DUF803 domain containing, putative, expressed -
11 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
12 Sobic.006G092400 calmodulin binding protein, putative, expressed -
13 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
15 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
17 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
18 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
19 Sobic.009G068500 expressed protein -
20 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -


Gene co-expression network
sample Sobic010G074300 Sobic010G074300 Sobic010G147100 Sobic010G147100 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic007G190000 Sobic007G190000 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic010G147100--Sobic003G316500 Sobic010G278200 Sobic010G278200 Sobic010G147100--Sobic010G278200 Sobic010G147100--Sobic010G074300 Sobic003G313500 Sobic003G313500 Sobic010G147100--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic010G147100--Sobic001G390800 Sobic010G147100--Sobic002G311100 Sobic009G053900 Sobic009G053900 Sobic010G147100--Sobic009G053900 Sobic010G147100--Sobic001G268200 Sobic003G118200 Sobic003G118200 Sobic010G147100--Sobic003G118200 Sobic004G118200--Sobic010G074300 Sobic003G229300 Sobic003G229300 Sobic004G118200--Sobic003G229300 Sobic002G386100 Sobic002G386100 Sobic004G118200--Sobic002G386100 Sobic004G118200--Sobic001G268200 Sobic002G130800 Sobic002G130800 Sobic004G118200--Sobic002G130800 Sobic001G476700 Sobic001G476700 Sobic004G118200--Sobic001G476700 Sobic004G118200--Sobic010G147100 Sobic010G013800 Sobic010G013800 Sobic004G118200--Sobic010G013800 Sobic006G133900 Sobic006G133900 Sobic004G118200--Sobic006G133900 Sobic007G190000--Sobic010G074300 Sobic004G179300 Sobic004G179300 Sobic007G190000--Sobic004G179300 Sobic003G372500 Sobic003G372500 Sobic007G190000--Sobic003G372500 Sobic010G227100 Sobic010G227100 Sobic007G190000--Sobic010G227100 Sobic002G146300 Sobic002G146300 Sobic007G190000--Sobic002G146300 Sobic010G020800 Sobic010G020800 Sobic007G190000--Sobic010G020800 Sobic007G190000--Sobic009G074400 Sobic007G190000--Sobic010G147100 Sobic004G189200 Sobic004G189200 Sobic007G190000--Sobic004G189200 Sobic001G392300 Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic009G165800 Sobic009G165800 Sobic001G080700--Sobic009G165800 Sobic010G251000 Sobic010G251000 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic003G264200 Sobic003G264200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic002G311100--Sobic010G147100 Sobic002G311100--Sobic009G074400 Sobic010G013200 Sobic010G013200 Sobic002G311100--Sobic010G013200 Sobic003G264100 Sobic003G264100 Sobic002G311100--Sobic003G264100 Sobic002G311100--Sobic010G131900 Sobic002G311100--Sobic010G074300 Sobic009G143700 Sobic009G143700 Sobic002G311100--Sobic009G143700 Sobic009G201300 Sobic009G201300 Sobic002G311100--Sobic009G201300 Sobic003G195000 Sobic003G195000 Sobic002G311100--Sobic003G195000 Sobic009G084000 Sobic009G084000 Sobic010G131900--Sobic009G084000 Sobic010G131900--Sobic002G311100 Sobic010G131900--Sobic010G074300 Sobic002G263600 Sobic002G263600 Sobic010G131900--Sobic002G263600 Sobic010G131900--Sobic010G147100 Sobic003G365300 Sobic003G365300 Sobic010G131900--Sobic003G365300 Sobic009G068500 Sobic009G068500 Sobic010G131900--Sobic009G068500 Sobic010G131900--Sobic003G264100 Sobic001G203900 Sobic001G203900 Sobic010G131900--Sobic001G203900 Sobic009G074400--Sobic003G316500 Sobic001G534700 Sobic001G534700 Sobic009G074400--Sobic001G534700 Sobic003G155100 Sobic003G155100 Sobic009G074400--Sobic003G155100 Sobic003G198800 Sobic003G198800 Sobic009G074400--Sobic003G198800 Sobic009G074400--Sobic002G311100 Sobic006G051800 Sobic006G051800 Sobic009G074400--Sobic006G051800 Sobic006G219600 Sobic006G219600 Sobic009G074400--Sobic006G219600 Sobic008G001200 Sobic008G001200 Sobic009G074400--Sobic008G001200 Sobic004G001500 Sobic004G001500 Sobic009G074400--Sobic004G001500 Sobic003G316500--Sobic001G534700 Sobic003G316500--Sobic009G053900 Sobic003G316500--Sobic009G074400 Sobic001G389100 Sobic001G389100 Sobic003G316500--Sobic001G389100 Sobic003G316500--Sobic010G147100 Sobic001G365900 Sobic001G365900 Sobic003G316500--Sobic001G365900 Sobic009G165700 Sobic009G165700 Sobic003G316500--Sobic009G165700 Sobic001G451400 Sobic001G451400 Sobic003G316500--Sobic001G451400 Sobic010G206900 Sobic010G206900 Sobic003G316500--Sobic010G206900 Sobic001G268200--Sobic001G390800 Sobic001G268200--Sobic010G013200 Sobic001G268200--Sobic010G147100 Sobic001G268200--Sobic003G313500 Sobic001G121200 Sobic001G121200 Sobic001G268200--Sobic001G121200 Sobic010G139600 Sobic010G139600 Sobic001G268200--Sobic010G139600 Sobic001G085300 Sobic001G085300 Sobic001G268200--Sobic001G085300 Sobic001G194200 Sobic001G194200 Sobic001G268200--Sobic001G194200 Sobic001G268200--Sobic009G053900
Octagon: transcription factors


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