Gene annotation
Transcriptome id Sobic.001G080700.1
Synonym Sb01g007270, CKA1, ATCKA1
Functional annotation casein kinase II subunit alpha-2, putative, expressed
UniProt C5X044
Pfam PF07714
Panther DB PTHR24054 PTHR24054:SF32
NCBI CDD -
KEGG Orthology K03097; casein kinase II subunit alpha
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G50000 : casein kinase II, alpha chain 2
RAP-DB (Rice) LOC_Os07g02350.1 : casein kinase II subunit alpha-2, putative, expressed
MaizeGDB (Corn) Zm00025a008276 , Zm00025a008261 , Zm00025a016239 , Zm00025a016747 , Zm00025a044896
Brachypodium KQK21155 , KQK13063
Barley HORVU2Hr1G063420.9 , HORVU2Hr1G063420.8 , HORVU2Hr1G063420.1 , HORVU4Hr1G030100.1 , HORVU2Hr1G063420.3 , HORVU2Hr1G063420.2 , HORVU2Hr1G063420.5 , HORVU2Hr1G063420.4 , HORVU2Hr1G063420.7 , HORVU2Hr1G063420.6 , HORVU5Hr1G097230.4 , HORVU5Hr1G097230.5 , HORVU5Hr1G097230.1 , HORVU5Hr1G097230.3 , HORVU2Hr1G063420.10 , HORVU5Hr1G097400.4 , HORVU5Hr1G097400.3 , HORVU5Hr1G097400.2 , HORVU5Hr1G097400.1
Wheat TraesCS2A02G263400 , TraesCS2A02G263400 , TraesCS2B02G278700 , TraesCS2B02G278700 , TraesCS2D02G260500 , TraesCS2D02G260500 , TraesCS5B02G404900 , TraesCS5B02G405700 , TraesCS5A02G400100 , TraesCS5D02G410000 , TraesCS5D02G411100 , TraesCS5A02G400900
Populus PNT36757 , PNT36756 , PNT36755 , PNT36754 , PNT36758 , PNT27251 , PNT27252 , PNT27253 , PNT27254


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cDNA sequences
Sobic.001G080700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
2 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
3 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
4 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
5 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
6 Sobic.009G222500 expressed protein -
7 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
8 Sobic.001G332500 WRKY81, expressed -
9 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
10 Sobic.002G054300 ABC transporter, ATP-binding protein, putative, expressed K06184: ATP-binding cassette, subfamily F, member 1
11 Sobic.006G200600 expressed protein -
12 Sobic.004G121100 expressed protein -
13 Sobic.008G070800 expressed protein -
14 Sobic.010G074300 smr domain containing protein, expressed -
15 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
16 Sobic.007G061000 mitotic checkpoint protein, putative, expressed K14298: RAE1, mRNA export factor
17 Sobic.007G078600 YT521-B, putative, expressed -
18 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
19 Sobic.007G078500 serine/threonine-protein kinase HT1, putative, expressed -
20 Sobic.002G161800 Myb-like DNA-binding domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G080700 Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic009G165800 Sobic009G165800 Sobic001G080700--Sobic009G165800 Sobic010G251000 Sobic010G251000 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic003G264200 Sobic003G264200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic001G392300--Sobic001G080700 Sobic007G061000 Sobic007G061000 Sobic001G392300--Sobic007G061000 Sobic009G177500 Sobic009G177500 Sobic001G392300--Sobic009G177500 Sobic004G353200 Sobic004G353200 Sobic001G392300--Sobic004G353200 Sobic001G392300--Sobic001G007000 Sobic007G075900 Sobic007G075900 Sobic001G392300--Sobic007G075900 Sobic009G044800 Sobic009G044800 Sobic001G392300--Sobic009G044800 Sobic008G047800 Sobic008G047800 Sobic001G392300--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic001G392300--Sobic006G200600 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic010G083700 Sobic010G083700 Sobic009G165800--Sobic010G083700 Sobic009G165800--Sobic010G251000 Sobic004G121100 Sobic004G121100 Sobic009G165800--Sobic004G121100 Sobic009G165800--Sobic003G264200 Sobic010G251000--Sobic001G007000 Sobic010G251000--Sobic001G080700 Sobic010G251000--Sobic006G200600 Sobic010G251000--Sobic004G066200 Sobic010G251000--Sobic004G121100 Sobic010G251000--Sobic001G392300 Sobic010G251000--Sobic001G047400 Sobic010G251000--Sobic004G353200 Sobic008G046500 Sobic008G046500 Sobic010G251000--Sobic008G046500 Sobic001G356600 Sobic001G356600 Sobic004G066200--Sobic001G356600 Sobic009G228700 Sobic009G228700 Sobic004G066200--Sobic009G228700 Sobic004G066200--Sobic006G101700 Sobic004G066200--Sobic001G080700 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic003G248200 Sobic003G248200 Sobic004G066200--Sobic003G248200 Sobic004G066200--Sobic004G353200 Sobic001G091300 Sobic001G091300 Sobic004G066200--Sobic001G091300 Sobic001G031100 Sobic001G031100 Sobic003G264200--Sobic001G031100 Sobic003G264200--Sobic001G080700 Sobic007G166400 Sobic007G166400 Sobic003G264200--Sobic007G166400 Sobic003G264200--Sobic009G222500 Sobic006G049700 Sobic006G049700 Sobic003G264200--Sobic006G049700 Sobic003G264200--Sobic006G101700 Sobic002G047700 Sobic002G047700 Sobic003G264200--Sobic002G047700 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic009G075800 Sobic009G075800 Sobic009G222500--Sobic009G075800 Sobic009G222500--Sobic006G049700 Sobic009G222500--Sobic001G080700 Sobic009G222500--Sobic006G101700 Sobic009G222500--Sobic004G066200 Sobic009G222500--Sobic007G166400 Sobic010G027600 Sobic010G027600 Sobic009G222500--Sobic010G027600 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic006G101700--Sobic004G066200 Sobic006G101700--Sobic007G166400 Sobic001G085100 Sobic001G085100 Sobic006G101700--Sobic001G085100 Sobic006G101700--Sobic001G080700 Sobic006G101700--Sobic009G222500 Sobic006G101700--Sobic009G165800 Sobic002G192200 Sobic002G192200 Sobic006G101700--Sobic002G192200 Sobic006G101700--Sobic006G049700 Sobic001G512300 Sobic001G512300 Sobic006G101700--Sobic001G512300 Sobic001G332500--Sobic001G080700 Sobic001G122832 Sobic001G122832 Sobic001G332500--Sobic001G122832 Sobic003G253600 Sobic003G253600 Sobic001G332500--Sobic003G253600 Sobic001G375700 Sobic001G375700 Sobic001G332500--Sobic001G375700 Sobic001G332500--Sobic001G392300 Sobic003G221900 Sobic003G221900 Sobic001G332500--Sobic003G221900 Sobic007G136800 Sobic007G136800 Sobic001G332500--Sobic007G136800 Sobic003G398700 Sobic003G398700 Sobic001G332500--Sobic003G398700 Sobic006G185100 Sobic006G185100 Sobic001G332500--Sobic006G185100 Sobic009G068500 Sobic009G068500 Sobic001G007000--Sobic009G068500 Sobic001G007000--Sobic010G251000 Sobic001G007000--Sobic001G392300 Sobic002G359400 Sobic002G359400 Sobic001G007000--Sobic002G359400 Sobic001G007000--Sobic004G353200 Sobic010G205800 Sobic010G205800 Sobic001G007000--Sobic010G205800 Sobic001G007000--Sobic008G046500 Sobic001G007000--Sobic001G080700 Sobic001G007000--Sobic001G031100
Octagon: transcription factors


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