Gene annotation
Transcriptome id Sobic.001G031100.1
Synonym Sb01g002910
Functional annotation dolichyl-phosphate beta-glycosyltransferase, putative, expressed
UniProt C5WUY2
Pfam PF13641
Panther DB PTHR10859
NCBI CDD KOG2978; Dolichol-phosphate mannosyltransferase
KEGG Orthology K00721; dolichol-phosphate mannosyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20575 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os03g60939.1 : dolichyl-phosphate beta-glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a008851
Brachypodium PNT70919 , KQK05385
Barley HORVU5Hr1G081360.9 , HORVU5Hr1G081360.8 , HORVU5Hr1G081360.5 , HORVU5Hr1G081360.4 , HORVU5Hr1G081360.7 , HORVU5Hr1G081360.6 , HORVU5Hr1G081360.1 , HORVU5Hr1G081360.3 , HORVU5Hr1G081360.2 , HORVU5Hr1G081360.11 , HORVU5Hr1G081360.10 , HORVU5Hr1G081360.13 , HORVU5Hr1G081360.12 , HORVU5Hr1G081360.15 , HORVU5Hr1G081360.14 , HORVU5Hr1G081360.17 , HORVU5Hr1G081360.16
Wheat TraesCS5D02G500800 , TraesCS5D02G500800 , TraesCS5B02G318900 , TraesCS5D02G324700 , TraesCS5A02G486600 , TraesCS5A02G486600 , TraesCS5B02G500500 , TraesCS5B02G500500 , TraesCS5A02G318400
Populus -


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cDNA sequences
Sobic.001G031100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
2 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
3 Sobic.001G007000 -(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
4 Sobic.004G054100 protein-O-fucosyltransferase 1, putative, expressed -
5 Sobic.002G047700 CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed -
6 Sobic.009G222500 expressed protein -
7 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
8 Sobic.009G068500 expressed protein -
9 Sobic.010G251000 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
10 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
11 Sobic.008G046500 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
12 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
13 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
14 Sobic.006G049700 SAM domain family protein, expressed -
15 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
16 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
17 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
18 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
19 Sobic.009G084000 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
20 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1


Gene co-expression network
sample Sobic001G031100 Sobic001G031100 Sobic009G192000 Sobic009G192000 Sobic001G031100--Sobic009G192000 Sobic003G264200 Sobic003G264200 Sobic001G031100--Sobic003G264200 Sobic001G007000 Sobic001G007000 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic002G047700 Sobic002G047700 Sobic001G031100--Sobic002G047700 Sobic009G222500 Sobic009G222500 Sobic001G031100--Sobic009G222500 Sobic001G080700 Sobic001G080700 Sobic001G031100--Sobic001G080700 Sobic009G068500 Sobic009G068500 Sobic001G031100--Sobic009G068500 Sobic010G251000 Sobic010G251000 Sobic001G031100--Sobic010G251000 Sobic009G192000--Sobic001G031100 Sobic007G167900 Sobic007G167900 Sobic009G192000--Sobic007G167900 Sobic010G020400 Sobic010G020400 Sobic009G192000--Sobic010G020400 Sobic003G349300 Sobic003G349300 Sobic009G192000--Sobic003G349300 Sobic001G014800 Sobic001G014800 Sobic009G192000--Sobic001G014800 Sobic003G338500 Sobic003G338500 Sobic009G192000--Sobic003G338500 Sobic006G180000 Sobic006G180000 Sobic009G192000--Sobic006G180000 Sobic010G205300 Sobic010G205300 Sobic009G192000--Sobic010G205300 Sobic003G374000 Sobic003G374000 Sobic009G192000--Sobic003G374000 Sobic003G264200--Sobic001G031100 Sobic003G264200--Sobic001G080700 Sobic007G166400 Sobic007G166400 Sobic003G264200--Sobic007G166400 Sobic003G264200--Sobic009G222500 Sobic006G049700 Sobic006G049700 Sobic003G264200--Sobic006G049700 Sobic006G101700 Sobic006G101700 Sobic003G264200--Sobic006G101700 Sobic003G264200--Sobic002G047700 Sobic009G165800 Sobic009G165800 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic001G007000--Sobic009G068500 Sobic001G007000--Sobic010G251000 Sobic001G392300 Sobic001G392300 Sobic001G007000--Sobic001G392300 Sobic002G359400 Sobic002G359400 Sobic001G007000--Sobic002G359400 Sobic004G353200 Sobic004G353200 Sobic001G007000--Sobic004G353200 Sobic010G205800 Sobic010G205800 Sobic001G007000--Sobic010G205800 Sobic008G046500 Sobic008G046500 Sobic001G007000--Sobic008G046500 Sobic001G007000--Sobic001G080700 Sobic001G007000--Sobic001G031100 Sobic004G054100--Sobic001G031100 Sobic003G354600 Sobic003G354600 Sobic004G054100--Sobic003G354600 Sobic009G084000 Sobic009G084000 Sobic004G054100--Sobic009G084000 Sobic004G054100--Sobic010G020400 Sobic004G054100--Sobic002G359400 Sobic004G054100--Sobic001G007000 Sobic004G054100--Sobic002G047700 Sobic004G054100--Sobic006G180000 Sobic001G355800 Sobic001G355800 Sobic004G054100--Sobic001G355800 Sobic002G047700--Sobic006G180000 Sobic002G047700--Sobic010G020400 Sobic002G047700--Sobic001G007000 Sobic002G047700--Sobic001G031100 Sobic002G047700--Sobic007G167900 Sobic008G070800 Sobic008G070800 Sobic002G047700--Sobic008G070800 Sobic002G047700--Sobic001G014800 Sobic002G047700--Sobic003G264200 Sobic009G044800 Sobic009G044800 Sobic002G047700--Sobic009G044800 Sobic009G075800 Sobic009G075800 Sobic009G222500--Sobic009G075800 Sobic009G222500--Sobic006G049700 Sobic009G222500--Sobic001G080700 Sobic009G222500--Sobic006G101700 Sobic004G066200 Sobic004G066200 Sobic009G222500--Sobic004G066200 Sobic009G222500--Sobic007G166400 Sobic010G027600 Sobic010G027600 Sobic009G222500--Sobic010G027600 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic001G080700--Sobic001G392300 Sobic001G080700--Sobic009G165800 Sobic001G080700--Sobic010G251000 Sobic001G080700--Sobic004G066200 Sobic001G080700--Sobic003G264200 Sobic001G080700--Sobic009G222500 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G080700--Sobic001G007000 Sobic009G068500--Sobic001G007000 Sobic001G193300 Sobic001G193300 Sobic009G068500--Sobic001G193300 Sobic003G264100 Sobic003G264100 Sobic009G068500--Sobic003G264100 Sobic007G093800 Sobic007G093800 Sobic009G068500--Sobic007G093800 Sobic003G006300 Sobic003G006300 Sobic009G068500--Sobic003G006300 Sobic003G365300 Sobic003G365300 Sobic009G068500--Sobic003G365300 Sobic009G068500--Sobic002G359400 Sobic009G068500--Sobic010G020400 Sobic009G068500--Sobic010G251000 Sobic010G251000--Sobic001G007000 Sobic010G251000--Sobic001G080700 Sobic006G200600 Sobic006G200600 Sobic010G251000--Sobic006G200600 Sobic010G251000--Sobic004G066200 Sobic004G121100 Sobic004G121100 Sobic010G251000--Sobic004G121100 Sobic010G251000--Sobic001G392300 Sobic001G047400 Sobic001G047400 Sobic010G251000--Sobic001G047400 Sobic010G251000--Sobic004G353200 Sobic010G251000--Sobic008G046500
Octagon: transcription factors


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