Gene annotation
Transcriptome id Sobic.003G264200.1
Synonym ATFYPP3, FYPP3, EMB2736, STPP, Sb03g031760
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5XHF2
Pfam PF00149
Panther DB PTHR11668 PTHR11668:SF289
NCBI CDD -
KEGG Orthology K15498; serine/threonine-protein phosphatase 6 catalytic subunit
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G19980 : flower-specific, phytochrome-associated protein phosphatase 3
RAP-DB (Rice) LOC_Os01g49690.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a045957 , Zm00025a027948 , Zm00025a038872
Brachypodium KQK09273
Barley HORVU3Hr1G064290.2 , HORVU3Hr1G064290.3 , HORVU3Hr1G064290.1 , HORVU3Hr1G064290.4 , HORVU1Hr1G083000.6 , HORVU1Hr1G083000.7 , HORVU1Hr1G083000.4 , HORVU1Hr1G083000.5 , HORVU1Hr1G083000.2 , HORVU1Hr1G083000.3 , HORVU1Hr1G083000.1
Wheat TraesCS1D02G380200 , TraesCS1B02G393500 , TraesCS3D02G261300 , TraesCS3B02G294200 , TraesCS1A02G373300 , TraesCS3A02G261200
Populus -


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cDNA sequences
Sobic.003G264200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase
2 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
3 Sobic.007G166400 mediator of RNA polymerase II transcription subunit 31, putative, expressed K15153: MED31, mediator of RNA polymerase II transcription subunit 31
4 Sobic.009G222500 expressed protein -
5 Sobic.006G049700 SAM domain family protein, expressed -
6 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
7 Sobic.002G047700 CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.009G165800 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
9 Sobic.007G166100 no apical meristem protein, putative, expressed -
10 Sobic.002G129000 RING zinc finger protein, putative, expressed -
11 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
12 Sobic.001G294900 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
13 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
14 Sobic.010G092300 N-rich protein, putative, expressed -
15 Sobic.006G017000 WD domain, G-beta repeat domain containing protein, expressed K12862: PLRG1, PRL1, pleiotropic regulator 1
16 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
17 Sobic.003G010400 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
18 Sobic.006G225300 expressed protein -
19 Sobic.005G033200 expressed protein -
20 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43


Gene co-expression network
sample Sobic003G264200 Sobic003G264200 Sobic001G031100 Sobic001G031100 Sobic003G264200--Sobic001G031100 Sobic001G080700 Sobic001G080700 Sobic003G264200--Sobic001G080700 Sobic007G166400 Sobic007G166400 Sobic003G264200--Sobic007G166400 Sobic009G222500 Sobic009G222500 Sobic003G264200--Sobic009G222500 Sobic006G049700 Sobic006G049700 Sobic003G264200--Sobic006G049700 Sobic006G101700 Sobic006G101700 Sobic003G264200--Sobic006G101700 Sobic002G047700 Sobic002G047700 Sobic003G264200--Sobic002G047700 Sobic009G165800 Sobic009G165800 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic009G192000 Sobic009G192000 Sobic001G031100--Sobic009G192000 Sobic001G031100--Sobic003G264200 Sobic001G007000 Sobic001G007000 Sobic001G031100--Sobic001G007000 Sobic004G054100 Sobic004G054100 Sobic001G031100--Sobic004G054100 Sobic001G031100--Sobic002G047700 Sobic001G031100--Sobic009G222500 Sobic001G031100--Sobic001G080700 Sobic009G068500 Sobic009G068500 Sobic001G031100--Sobic009G068500 Sobic010G251000 Sobic010G251000 Sobic001G031100--Sobic010G251000 Sobic001G392300 Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic001G080700--Sobic009G165800 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic001G080700--Sobic003G264200 Sobic001G080700--Sobic009G222500 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G080700--Sobic001G007000 Sobic007G166400--Sobic006G101700 Sobic007G166400--Sobic003G264200 Sobic007G166400--Sobic009G222500 Sobic007G166400--Sobic006G049700 Sobic007G167900 Sobic007G167900 Sobic007G166400--Sobic007G167900 Sobic007G166400--Sobic004G066200 Sobic006G044600 Sobic006G044600 Sobic007G166400--Sobic006G044600 Sobic008G153500 Sobic008G153500 Sobic007G166400--Sobic008G153500 Sobic001G114500 Sobic001G114500 Sobic007G166400--Sobic001G114500 Sobic009G075800 Sobic009G075800 Sobic009G222500--Sobic009G075800 Sobic009G222500--Sobic006G049700 Sobic009G222500--Sobic001G080700 Sobic009G222500--Sobic006G101700 Sobic009G222500--Sobic004G066200 Sobic009G222500--Sobic007G166400 Sobic010G027600 Sobic010G027600 Sobic009G222500--Sobic010G027600 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic006G049700--Sobic009G222500 Sobic006G049700--Sobic007G166400 Sobic006G049700--Sobic003G264200 Sobic006G049700--Sobic006G101700 Sobic006G049700--Sobic007G167900 Sobic004G226800 Sobic004G226800 Sobic006G049700--Sobic004G226800 Sobic006G049700--Sobic010G027600 Sobic002G113900 Sobic002G113900 Sobic006G049700--Sobic002G113900 Sobic004G356900 Sobic004G356900 Sobic006G049700--Sobic004G356900 Sobic006G101700--Sobic004G066200 Sobic006G101700--Sobic007G166400 Sobic001G085100 Sobic001G085100 Sobic006G101700--Sobic001G085100 Sobic006G101700--Sobic001G080700 Sobic006G101700--Sobic009G222500 Sobic006G101700--Sobic009G165800 Sobic002G192200 Sobic002G192200 Sobic006G101700--Sobic002G192200 Sobic006G101700--Sobic006G049700 Sobic001G512300 Sobic001G512300 Sobic006G101700--Sobic001G512300 Sobic006G180000 Sobic006G180000 Sobic002G047700--Sobic006G180000 Sobic010G020400 Sobic010G020400 Sobic002G047700--Sobic010G020400 Sobic002G047700--Sobic001G007000 Sobic002G047700--Sobic001G031100 Sobic002G047700--Sobic007G167900 Sobic008G070800 Sobic008G070800 Sobic002G047700--Sobic008G070800 Sobic001G014800 Sobic001G014800 Sobic002G047700--Sobic001G014800 Sobic002G047700--Sobic003G264200 Sobic009G044800 Sobic009G044800 Sobic002G047700--Sobic009G044800 Sobic009G165800--Sobic001G080700 Sobic001G047400 Sobic001G047400 Sobic009G165800--Sobic001G047400 Sobic009G165800--Sobic006G101700 Sobic002G110700 Sobic002G110700 Sobic009G165800--Sobic002G110700 Sobic003G015900 Sobic003G015900 Sobic009G165800--Sobic003G015900 Sobic010G083700 Sobic010G083700 Sobic009G165800--Sobic010G083700 Sobic009G165800--Sobic010G251000 Sobic004G121100 Sobic004G121100 Sobic009G165800--Sobic004G121100 Sobic009G165800--Sobic003G264200 Sobic001G395400 Sobic001G395400 Sobic007G166100--Sobic001G395400 Sobic010G000900 Sobic010G000900 Sobic007G166100--Sobic010G000900 Sobic007G166100--Sobic004G356900 Sobic002G400000 Sobic002G400000 Sobic007G166100--Sobic002G400000 Sobic004G104900 Sobic004G104900 Sobic007G166100--Sobic004G104900 Sobic009G004600 Sobic009G004600 Sobic007G166100--Sobic009G004600 Sobic007G166100--Sobic001G085100 Sobic007G166100--Sobic010G027600 Sobic007G166100--Sobic004G066200
Octagon: transcription factors


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