Gene annotation
Transcriptome id Sobic.005G033200.1
Synonym Sb05g002780
Functional annotation expressed protein
UniProt C5Y4K0
Pfam PF13902
Panther DB PTHR32019 PTHR32019:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03250 : -
RAP-DB (Rice) LOC_Os12g05000.1 : expressed protein
MaizeGDB (Corn) Zm00025a033454 , Zm00025a036538
Brachypodium KQJ92331
Barley HORVU5Hr1G040870.2 , HORVU5Hr1G040870.1
Wheat TraesCS5A02G133600 , TraesCS5A02G133600 , TraesCS5B02G131700 , TraesCS5D02G141400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.005G033200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
2 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
3 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
4 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
5 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
6 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
7 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
8 Sobic.003G440800 vacuolar protein sorting 55 family protein, putative, expressed -
9 Sobic.006G049700 SAM domain family protein, expressed -
10 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
11 Sobic.008G118900 OsAPRL6 adenosine 5\'-phosphosulfate reductase-like OsAPRL6, expressed -
12 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
13 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
14 Sobic.001G234200 actin, putative, expressed K16615: actin-related protein 7, plant
15 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
16 Sobic.010G205300 secreted salivary protein, putative, expressed -
17 Sobic.002G111200 dehydrogenase/reductase SDR family member 2, putative, expressed K11147: dehydrogenase/reductase SDR family member 4
18 Sobic.004G327300 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
19 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.007G170900 histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein


Gene co-expression network
sample Sobic005G033200 Sobic005G033200 Sobic003G264200 Sobic003G264200 Sobic005G033200--Sobic003G264200 Sobic001G314500 Sobic001G314500 Sobic005G033200--Sobic001G314500 Sobic001G428100 Sobic001G428100 Sobic005G033200--Sobic001G428100 Sobic004G130100 Sobic004G130100 Sobic005G033200--Sobic004G130100 Sobic005G111900 Sobic005G111900 Sobic005G033200--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic005G033200--Sobic003G349300 Sobic009G217900 Sobic009G217900 Sobic005G033200--Sobic009G217900 Sobic003G440800 Sobic003G440800 Sobic005G033200--Sobic003G440800 Sobic006G049700 Sobic006G049700 Sobic005G033200--Sobic006G049700 Sobic001G031100 Sobic001G031100 Sobic003G264200--Sobic001G031100 Sobic001G080700 Sobic001G080700 Sobic003G264200--Sobic001G080700 Sobic007G166400 Sobic007G166400 Sobic003G264200--Sobic007G166400 Sobic009G222500 Sobic009G222500 Sobic003G264200--Sobic009G222500 Sobic003G264200--Sobic006G049700 Sobic006G101700 Sobic006G101700 Sobic003G264200--Sobic006G101700 Sobic002G047700 Sobic002G047700 Sobic003G264200--Sobic002G047700 Sobic009G165800 Sobic009G165800 Sobic003G264200--Sobic009G165800 Sobic007G166100 Sobic007G166100 Sobic003G264200--Sobic007G166100 Sobic006G212100 Sobic006G212100 Sobic001G314500--Sobic006G212100 Sobic009G198500 Sobic009G198500 Sobic001G314500--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic001G314500--Sobic007G168600 Sobic001G388200 Sobic001G388200 Sobic001G314500--Sobic001G388200 Sobic006G232200 Sobic006G232200 Sobic001G314500--Sobic006G232200 Sobic001G054200 Sobic001G054200 Sobic001G314500--Sobic001G054200 Sobic009G004600 Sobic009G004600 Sobic001G314500--Sobic009G004600 Sobic010G205300 Sobic010G205300 Sobic001G314500--Sobic010G205300 Sobic003G217400 Sobic003G217400 Sobic001G314500--Sobic003G217400 Sobic006G281200 Sobic006G281200 Sobic001G428100--Sobic006G281200 Sobic001G502200 Sobic001G502200 Sobic001G428100--Sobic001G502200 Sobic001G501200 Sobic001G501200 Sobic001G428100--Sobic001G501200 Sobic004G060600 Sobic004G060600 Sobic001G428100--Sobic004G060600 Sobic001G428100--Sobic009G198500 Sobic001G428100--Sobic009G004600 Sobic001G428100--Sobic003G440800 Sobic001G315500 Sobic001G315500 Sobic001G428100--Sobic001G315500 Sobic003G117300 Sobic003G117300 Sobic001G428100--Sobic003G117300 Sobic004G130100--Sobic009G217900 Sobic004G130100--Sobic006G232200 Sobic004G130100--Sobic001G501200 Sobic003G337000 Sobic003G337000 Sobic004G130100--Sobic003G337000 Sobic002G363100 Sobic002G363100 Sobic004G130100--Sobic002G363100 Sobic003G124800 Sobic003G124800 Sobic004G130100--Sobic003G124800 Sobic004G130100--Sobic009G198500 Sobic002G428200 Sobic002G428200 Sobic004G130100--Sobic002G428200 Sobic004G130100--Sobic001G428100 Sobic007G061400 Sobic007G061400 Sobic005G111900--Sobic007G061400 Sobic001G014800 Sobic001G014800 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic006G002201 Sobic006G002201 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic005G111900--Sobic003G349300 Sobic005G111900--Sobic010G205300 Sobic001G473800 Sobic001G473800 Sobic005G111900--Sobic001G473800 Sobic009G149500 Sobic009G149500 Sobic005G111900--Sobic009G149500 Sobic003G349300--Sobic010G205300 Sobic001G294900 Sobic001G294900 Sobic003G349300--Sobic001G294900 Sobic009G135600 Sobic009G135600 Sobic003G349300--Sobic009G135600 Sobic003G349300--Sobic001G388200 Sobic004G181900 Sobic004G181900 Sobic003G349300--Sobic004G181900 Sobic009G192000 Sobic009G192000 Sobic003G349300--Sobic009G192000 Sobic001G283200 Sobic001G283200 Sobic003G349300--Sobic001G283200 Sobic003G261400 Sobic003G261400 Sobic003G349300--Sobic003G261400 Sobic003G349300--Sobic007G168600 Sobic009G217900--Sobic004G130100 Sobic009G217900--Sobic002G363100 Sobic009G217900--Sobic001G501200 Sobic009G217900--Sobic010G205300 Sobic009G217900--Sobic005G033200 Sobic010G042100 Sobic010G042100 Sobic009G217900--Sobic010G042100 Sobic009G217900--Sobic001G314500 Sobic009G217900--Sobic003G440800 Sobic009G217900--Sobic009G198500 Sobic003G440800--Sobic001G428100 Sobic003G440800--Sobic001G314500 Sobic003G440800--Sobic009G004600 Sobic003G440800--Sobic004G130100 Sobic003G440800--Sobic010G205300 Sobic003G386100 Sobic003G386100 Sobic003G440800--Sobic003G386100 Sobic003G440800--Sobic009G198500 Sobic003G440800--Sobic001G501200 Sobic003G440800--Sobic005G033200 Sobic006G049700--Sobic009G222500 Sobic006G049700--Sobic007G166400 Sobic006G049700--Sobic003G264200 Sobic006G049700--Sobic006G101700 Sobic007G167900 Sobic007G167900 Sobic006G049700--Sobic007G167900 Sobic004G226800 Sobic004G226800 Sobic006G049700--Sobic004G226800 Sobic010G027600 Sobic010G027600 Sobic006G049700--Sobic010G027600 Sobic002G113900 Sobic002G113900 Sobic006G049700--Sobic002G113900 Sobic004G356900 Sobic004G356900 Sobic006G049700--Sobic004G356900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.