Gene annotation
Transcriptome id Sobic.007G170900.3,Sobic.007G170900.4,Sobic.007G170900.5
Synonym Sb07g024310, AHP1
Functional annotation histidine-containing phosphotransfer protein, putative, expressed
UniProt C5YN90
Pfam PF01627
Panther DB PTHR28242 PTHR28242:SF6
NCBI CDD KOG4747; Two-component phosphorelay intermediate involved in MAP kinase cascade regulation
KEGG Orthology K14490; histidine-containing phosphotransfer peotein
Gene Ontology GO:0004871; obsolete signal transducer activity GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT3G21510 : histidine-containing phosphotransmitter 1
RAP-DB (Rice) LOC_Os08g44350.1 : histidine-containing phosphotransfer protein, putative, expressed
MaizeGDB (Corn) Zm00025a030565 , Zm00025a005617
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G170900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G186800 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
2 Sobic.005G033200 expressed protein -
3 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
4 Sobic.002G428200 26S protease regulatory subunit 4, putative, expressed K03062: PSMC1, 26S proteasome regulatory subunit T2
5 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
6 Sobic.003G103400 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
7 Sobic.003G113800 CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
K00924: kinase
8 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
9 Sobic.009G005900 actin, putative, expressed K10355: actin, other eukaryote
10 Sobic.010G180700 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
11 Sobic.010G277800 lysM domain containing protein, putative, expressed -
12 Sobic.006G049700 SAM domain family protein, expressed -
13 Sobic.009G217900 expressed protein K06875: PDCD5, programmed cell death protein 5
14 Sobic.006G281200 csAtPR5, putative, expressed -
15 Sobic.001G315500 ethylene-responsive element-binding protein, putative, expressed -
16 Sobic.009G174900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
17 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
18 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
19 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
20 Sobic.003G117300 LSM domain containing protein, expressed K12623: U6 snRNA-associated Sm-like protein LSm4


Gene co-expression network
sample Sobic007G170900 Sobic007G170900 Sobic007G186800 Sobic007G186800 Sobic007G170900--Sobic007G186800 Sobic005G033200 Sobic005G033200 Sobic007G170900--Sobic005G033200 Sobic001G428100 Sobic001G428100 Sobic007G170900--Sobic001G428100 Sobic002G428200 Sobic002G428200 Sobic007G170900--Sobic002G428200 Sobic004G130100 Sobic004G130100 Sobic007G170900--Sobic004G130100 Sobic003G103400 Sobic003G103400 Sobic007G170900--Sobic003G103400 Sobic003G113800 Sobic003G113800 Sobic007G170900--Sobic003G113800 Sobic007G152400 Sobic007G152400 Sobic007G170900--Sobic007G152400 Sobic009G005900 Sobic009G005900 Sobic007G170900--Sobic009G005900 Sobic001G034700 Sobic001G034700 Sobic007G186800--Sobic001G034700 Sobic007G134000 Sobic007G134000 Sobic007G186800--Sobic007G134000 Sobic003G254800 Sobic003G254800 Sobic007G186800--Sobic003G254800 Sobic005G188100 Sobic005G188100 Sobic007G186800--Sobic005G188100 Sobic002G257400 Sobic002G257400 Sobic007G186800--Sobic002G257400 Sobic003G018600 Sobic003G018600 Sobic007G186800--Sobic003G018600 Sobic001G086300 Sobic001G086300 Sobic007G186800--Sobic001G086300 Sobic001G128400 Sobic001G128400 Sobic007G186800--Sobic001G128400 Sobic001G172000 Sobic001G172000 Sobic007G186800--Sobic001G172000 Sobic003G264200 Sobic003G264200 Sobic005G033200--Sobic003G264200 Sobic001G314500 Sobic001G314500 Sobic005G033200--Sobic001G314500 Sobic005G033200--Sobic001G428100 Sobic005G033200--Sobic004G130100 Sobic005G111900 Sobic005G111900 Sobic005G033200--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic005G033200--Sobic003G349300 Sobic009G217900 Sobic009G217900 Sobic005G033200--Sobic009G217900 Sobic003G440800 Sobic003G440800 Sobic005G033200--Sobic003G440800 Sobic006G049700 Sobic006G049700 Sobic005G033200--Sobic006G049700 Sobic006G281200 Sobic006G281200 Sobic001G428100--Sobic006G281200 Sobic001G502200 Sobic001G502200 Sobic001G428100--Sobic001G502200 Sobic001G501200 Sobic001G501200 Sobic001G428100--Sobic001G501200 Sobic004G060600 Sobic004G060600 Sobic001G428100--Sobic004G060600 Sobic009G198500 Sobic009G198500 Sobic001G428100--Sobic009G198500 Sobic009G004600 Sobic009G004600 Sobic001G428100--Sobic009G004600 Sobic001G428100--Sobic003G440800 Sobic001G315500 Sobic001G315500 Sobic001G428100--Sobic001G315500 Sobic003G117300 Sobic003G117300 Sobic001G428100--Sobic003G117300 Sobic004G335000 Sobic004G335000 Sobic002G428200--Sobic004G335000 Sobic007G176200 Sobic007G176200 Sobic002G428200--Sobic007G176200 Sobic006G211800 Sobic006G211800 Sobic002G428200--Sobic006G211800 Sobic004G224900 Sobic004G224900 Sobic002G428200--Sobic004G224900 Sobic006G252200 Sobic006G252200 Sobic002G428200--Sobic006G252200 Sobic002G428200--Sobic001G502200 Sobic008G137600 Sobic008G137600 Sobic002G428200--Sobic008G137600 Sobic001G010700 Sobic001G010700 Sobic002G428200--Sobic001G010700 Sobic003G104700 Sobic003G104700 Sobic002G428200--Sobic003G104700 Sobic004G130100--Sobic009G217900 Sobic006G232200 Sobic006G232200 Sobic004G130100--Sobic006G232200 Sobic004G130100--Sobic001G501200 Sobic003G337000 Sobic003G337000 Sobic004G130100--Sobic003G337000 Sobic002G363100 Sobic002G363100 Sobic004G130100--Sobic002G363100 Sobic003G124800 Sobic003G124800 Sobic004G130100--Sobic003G124800 Sobic004G130100--Sobic009G198500 Sobic004G130100--Sobic002G428200 Sobic004G130100--Sobic001G428100 Sobic006G002201 Sobic006G002201 Sobic003G103400--Sobic006G002201 Sobic008G093200 Sobic008G093200 Sobic003G103400--Sobic008G093200 Sobic003G216500 Sobic003G216500 Sobic003G103400--Sobic003G216500 Sobic010G013900 Sobic010G013900 Sobic003G103400--Sobic010G013900 Sobic005G105500 Sobic005G105500 Sobic003G103400--Sobic005G105500 Sobic003G028100 Sobic003G028100 Sobic003G103400--Sobic003G028100 Sobic004G182500 Sobic004G182500 Sobic003G103400--Sobic004G182500 Sobic001G096100 Sobic001G096100 Sobic003G103400--Sobic001G096100 Sobic009G168000 Sobic009G168000 Sobic003G103400--Sobic009G168000 Sobic006G280500 Sobic006G280500 Sobic003G113800--Sobic006G280500 Sobic003G293300 Sobic003G293300 Sobic003G113800--Sobic003G293300 Sobic004G279100 Sobic004G279100 Sobic003G113800--Sobic004G279100 Sobic001G234200 Sobic001G234200 Sobic003G113800--Sobic001G234200 Sobic002G071000 Sobic002G071000 Sobic003G113800--Sobic002G071000 Sobic003G113800--Sobic006G049700 Sobic002G235300 Sobic002G235300 Sobic003G113800--Sobic002G235300 Sobic001G459100 Sobic001G459100 Sobic003G113800--Sobic001G459100 Sobic002G083900 Sobic002G083900 Sobic003G113800--Sobic002G083900 Sobic005G111100 Sobic005G111100 Sobic007G152400--Sobic005G111100 Sobic007G091000 Sobic007G091000 Sobic007G152400--Sobic007G091000 Sobic007G152400--Sobic002G428200 Sobic007G152400--Sobic002G257400 Sobic007G152400--Sobic001G128400 Sobic001G481700 Sobic001G481700 Sobic007G152400--Sobic001G481700 Sobic007G152400--Sobic008G137600 Sobic004G204800 Sobic004G204800 Sobic007G152400--Sobic004G204800 Sobic002G331300 Sobic002G331300 Sobic007G152400--Sobic002G331300 Sobic009G174900 Sobic009G174900 Sobic009G005900--Sobic009G174900 Sobic009G135600 Sobic009G135600 Sobic009G005900--Sobic009G135600 Sobic004G321900 Sobic004G321900 Sobic009G005900--Sobic004G321900 Sobic001G433400 Sobic001G433400 Sobic009G005900--Sobic001G433400 Sobic002G400000 Sobic002G400000 Sobic009G005900--Sobic002G400000 Sobic002G134001 Sobic002G134001 Sobic009G005900--Sobic002G134001 Sobic001G461900 Sobic001G461900 Sobic009G005900--Sobic001G461900 Sobic003G010400 Sobic003G010400 Sobic009G005900--Sobic003G010400 Sobic006G212100 Sobic006G212100 Sobic009G005900--Sobic006G212100
Octagon: transcription factors


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