Gene annotation
Transcriptome id Sobic.003G113800.1
Synonym Sb03g009580, SK11, ATSK11
Functional annotation CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5XFS4
Pfam PF07714
Panther DB PTHR24057
NCBI CDD -
KEGG Orthology K03083; glycogen synthase kinase 3 beta K00924kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G26751 : shaggy-related kinase 11
RAP-DB (Rice) LOC_Os01g14860.2 : CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a023925 , Zm00025a008775 , Zm00025a035356
Brachypodium KQK03613
Barley HORVU3Hr1G034440.4 , HORVU5Hr1G117030.2 , HORVU3Hr1G034440.8 , HORVU3Hr1G034440.2 , HORVU3Hr1G034440.3 , HORVU3Hr1G034440.1 , HORVU3Hr1G034440.6 , HORVU3Hr1G034440.7 , HORVU3Hr1G034440.5 , HORVU4Hr1G079520.3 , HORVU4Hr1G079520.2 , HORVU4Hr1G079520.5 , HORVU4Hr1G079520.4 , HORVU4Hr1G079520.6 , HORVU5Hr1G117030.5 , HORVU5Hr1G117030.4 , HORVU5Hr1G117030.7 , HORVU5Hr1G117030.6 , HORVU5Hr1G117030.1 , HORVU5Hr1G117030.3 , HORVU5Hr1G117030.9 , HORVU5Hr1G117030.8
Wheat TraesCS3B02G201800 , TraesCS3B02G201800 , TraesCS3A02G164200 , TraesCS4A02G361100 , TraesCS3A02G164200 , TraesCS5B02G511800 , TraesCS5B02G511800 , TraesCS5B02G511800 , TraesCS3D02G177600 , TraesCS3D02G177600
Populus -


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cDNA sequences
Sobic.003G113800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G280500 phosphate/phosphate translocator, putative, expressed -
2 Sobic.003G293300 nucleoporin, putative, expressed K14304: nuclear pore complex protein Nup85
3 Sobic.004G279100 CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.001G234200 actin, putative, expressed K16615: actin-related protein 7, plant
5 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
6 Sobic.006G049700 SAM domain family protein, expressed -
7 Sobic.002G235300 expressed protein -
8 Sobic.001G459100 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
9 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
10 Sobic.003G316700 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
11 Sobic.010G032400 mitotic checkpoint protein, putative, expressed K02180: cell cycle arrest protein BUB3
12 Sobic.007G170900 histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
13 Sobic.006G010000 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
14 Sobic.003G264200 Ser/Thr protein phosphatase family protein, putative, expressed K15498: serine/threonine-protein phosphatase 6 catalytic subunit
15 Sobic.001G251100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
16 Sobic.003G259400 katanin p60 ATPase-containing subunit, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
17 Sobic.002G148100 CRAL/TRIO domain containing protein, expressed -
18 Sobic.008G053300 CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.007G165900 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
20 Sobic.001G031100 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00721: dolichol-phosphate mannosyltransferase


Gene co-expression network
sample Sobic003G113800 Sobic003G113800 Sobic006G280500 Sobic006G280500 Sobic003G113800--Sobic006G280500 Sobic003G293300 Sobic003G293300 Sobic003G113800--Sobic003G293300 Sobic004G279100 Sobic004G279100 Sobic003G113800--Sobic004G279100 Sobic001G234200 Sobic001G234200 Sobic003G113800--Sobic001G234200 Sobic002G071000 Sobic002G071000 Sobic003G113800--Sobic002G071000 Sobic006G049700 Sobic006G049700 Sobic003G113800--Sobic006G049700 Sobic002G235300 Sobic002G235300 Sobic003G113800--Sobic002G235300 Sobic001G459100 Sobic001G459100 Sobic003G113800--Sobic001G459100 Sobic002G083900 Sobic002G083900 Sobic003G113800--Sobic002G083900 Sobic002G148100 Sobic002G148100 Sobic006G280500--Sobic002G148100 Sobic006G280500--Sobic003G113800 Sobic001G244700 Sobic001G244700 Sobic006G280500--Sobic001G244700 Sobic004G210500 Sobic004G210500 Sobic006G280500--Sobic004G210500 Sobic001G425150 Sobic001G425150 Sobic006G280500--Sobic001G425150 Sobic004G070700 Sobic004G070700 Sobic006G280500--Sobic004G070700 Sobic001G193300 Sobic001G193300 Sobic006G280500--Sobic001G193300 Sobic006G280500--Sobic003G293300 Sobic003G350800 Sobic003G350800 Sobic006G280500--Sobic003G350800 Sobic001G251100 Sobic001G251100 Sobic003G293300--Sobic001G251100 Sobic006G010000 Sobic006G010000 Sobic003G293300--Sobic006G010000 Sobic002G020700 Sobic002G020700 Sobic003G293300--Sobic002G020700 Sobic001G333100 Sobic001G333100 Sobic003G293300--Sobic001G333100 Sobic003G218300 Sobic003G218300 Sobic003G293300--Sobic003G218300 Sobic003G293300--Sobic002G071000 Sobic003G293300--Sobic001G234200 Sobic003G293300--Sobic003G113800 Sobic008G088806 Sobic008G088806 Sobic003G293300--Sobic008G088806 Sobic004G279100--Sobic003G113800 Sobic006G156300 Sobic006G156300 Sobic004G279100--Sobic006G156300 Sobic002G134600 Sobic002G134600 Sobic004G279100--Sobic002G134600 Sobic004G279100--Sobic002G235300 Sobic010G009800 Sobic010G009800 Sobic004G279100--Sobic010G009800 Sobic003G316700 Sobic003G316700 Sobic004G279100--Sobic003G316700 Sobic007G165900 Sobic007G165900 Sobic004G279100--Sobic007G165900 Sobic005G036800 Sobic005G036800 Sobic004G279100--Sobic005G036800 Sobic002G257200 Sobic002G257200 Sobic004G279100--Sobic002G257200 Sobic001G234200--Sobic002G071000 Sobic001G234200--Sobic006G049700 Sobic001G234200--Sobic006G010000 Sobic001G234200--Sobic003G293300 Sobic007G079300 Sobic007G079300 Sobic001G234200--Sobic007G079300 Sobic001G114500 Sobic001G114500 Sobic001G234200--Sobic001G114500 Sobic001G234200--Sobic001G459100 Sobic001G234200--Sobic002G083900 Sobic003G264200 Sobic003G264200 Sobic001G234200--Sobic003G264200 Sobic002G071000--Sobic007G079300 Sobic002G071000--Sobic001G234200 Sobic004G348900 Sobic004G348900 Sobic002G071000--Sobic004G348900 Sobic002G071000--Sobic006G010000 Sobic009G249100 Sobic009G249100 Sobic002G071000--Sobic009G249100 Sobic002G071000--Sobic003G293300 Sobic003G117300 Sobic003G117300 Sobic002G071000--Sobic003G117300 Sobic004G082900 Sobic004G082900 Sobic002G071000--Sobic004G082900 Sobic002G071000--Sobic006G049700 Sobic009G222500 Sobic009G222500 Sobic006G049700--Sobic009G222500 Sobic007G166400 Sobic007G166400 Sobic006G049700--Sobic007G166400 Sobic006G049700--Sobic003G264200 Sobic006G101700 Sobic006G101700 Sobic006G049700--Sobic006G101700 Sobic007G167900 Sobic007G167900 Sobic006G049700--Sobic007G167900 Sobic004G226800 Sobic004G226800 Sobic006G049700--Sobic004G226800 Sobic010G027600 Sobic010G027600 Sobic006G049700--Sobic010G027600 Sobic002G113900 Sobic002G113900 Sobic006G049700--Sobic002G113900 Sobic004G356900 Sobic004G356900 Sobic006G049700--Sobic004G356900 Sobic002G235300--Sobic003G113800 Sobic002G235300--Sobic002G083900 Sobic003G259400 Sobic003G259400 Sobic002G235300--Sobic003G259400 Sobic001G422700 Sobic001G422700 Sobic002G235300--Sobic001G422700 Sobic002G235300--Sobic002G071000 Sobic002G235300--Sobic006G010000 Sobic002G235300--Sobic004G279100 Sobic004G287900 Sobic004G287900 Sobic002G235300--Sobic004G287900 Sobic001G069600 Sobic001G069600 Sobic002G235300--Sobic001G069600 Sobic001G459100--Sobic004G226800 Sobic001G459100--Sobic006G049700 Sobic001G459100--Sobic001G234200 Sobic004G232800 Sobic004G232800 Sobic001G459100--Sobic004G232800 Sobic001G459100--Sobic002G113900 Sobic001G459100--Sobic004G356900 Sobic006G233000 Sobic006G233000 Sobic001G459100--Sobic006G233000 Sobic004G077600 Sobic004G077600 Sobic001G459100--Sobic004G077600 Sobic001G119900 Sobic001G119900 Sobic001G459100--Sobic001G119900 Sobic010G085200 Sobic010G085200 Sobic002G083900--Sobic010G085200 Sobic002G083900--Sobic001G234200 Sobic003G167900 Sobic003G167900 Sobic002G083900--Sobic003G167900 Sobic002G083900--Sobic006G010000 Sobic002G083900--Sobic001G251100 Sobic006G036100 Sobic006G036100 Sobic002G083900--Sobic006G036100 Sobic002G083900--Sobic008G088806 Sobic009G238850 Sobic009G238850 Sobic002G083900--Sobic009G238850 Sobic004G086700 Sobic004G086700 Sobic002G083900--Sobic004G086700
Octagon: transcription factors


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