Gene annotation
Transcriptome id Sobic.008G053300.1
Synonym ATCPK4, Sb08g004510, CPK4
Functional annotation CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5YSP8
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF132
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G09570 : calcium-dependent protein kinase 4
RAP-DB (Rice) LOC_Os12g07230.1 : CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a039723 , Zm00025a024833 , Zm00025a025734 , Zm00025a033981 , Zm00025a012860 , Zm00025a033617 , Zm00025a032700 , Zm00025a054043 , Zm00025a056693 , Zm00025a010059
Brachypodium PNT69746 , KQK10428 , KQJ91880 , KQJ89241 , KQJ91801 , PNT68518 , KQJ84217
Barley HORVU7Hr1G056060.1 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.3 , HORVU7Hr1G056060.5 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.10 , HORVU7Hr1G056060.11 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.6 , HORVU7Hr1G056060.7 , HORVU5Hr1G032550.1 , HORVU5Hr1G032550.2 , HORVU5Hr1G032550.3 , HORVU5Hr1G032550.4 , HORVU5Hr1G032550.5 , HORVU5Hr1G032550.6 , HORVU4Hr1G019530.8 , HORVU4Hr1G019530.4 , HORVU4Hr1G019530.5 , HORVU4Hr1G019530.6 , HORVU4Hr1G019530.7 , HORVU4Hr1G019530.1 , HORVU4Hr1G019530.2 , HORVU4Hr1G019530.3
Wheat TraesCS7B02G165200 , TraesCS2D02G456400 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS4B02G109800 , TraesCS5D02G124000 , TraesCS3D02G345500 , TraesCS5D02G122800 , TraesCS7A02G267000 , TraesCS4D02G107200 , TraesCS4A02G206200 , TraesCS4A02G206200 , TraesCS5B02G115400 , TraesCS5B02G115400 , TraesCS5D02G122800 , TraesCS2A02G456100 , TraesCS2B02G478100 , TraesCS6A02G421000 , TraesCS4B02G109800 , TraesCS5D02G122800 , TraesCS3B02G383800 , TraesCS5D02G122800 , TraesCS7D02G267700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G088806 - K16280: E3 ubiquitin-protein ligase RGLG
2 Sobic.001G193300 TBC domain containing protein, expressed -
3 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
4 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
5 Sobic.002G047700 CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed -
6 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
7 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
8 Sobic.008G033500 nucleolar GTPase, putative, expressed -
9 Sobic.001G355800 methyltransferase, putative, expressed -
10 Sobic.010G230600 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
11 Sobic.008G083200 transcription factor, putative, expressed K09060: plant G-box-binding factor
12 Sobic.002G051800 BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
13 Sobic.005G020300 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
14 Sobic.003G176000 lipase family protein, putative, expressed -
15 Sobic.001G283600 NTMC2Type1.2 protein, putative, expressed -
16 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
17 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
18 Sobic.003G428100 FYVE zinc finger domain containing protein, expressed -
19 Sobic.002G131200 Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.004G219000 CK1_CaseinKinase_1.5 - CK1 includes the casein kinase 1 kinases, expressed -


Gene co-expression network
sample Sobic008G053300 Sobic008G053300 Sobic008G088806 Sobic008G088806 Sobic008G053300--Sobic008G088806 Sobic001G193300 Sobic001G193300 Sobic008G053300--Sobic001G193300 Sobic001G333100 Sobic001G333100 Sobic008G053300--Sobic001G333100 Sobic010G020400 Sobic010G020400 Sobic008G053300--Sobic010G020400 Sobic002G047700 Sobic002G047700 Sobic008G053300--Sobic002G047700 Sobic002G020700 Sobic002G020700 Sobic008G053300--Sobic002G020700 Sobic001G404600 Sobic001G404600 Sobic008G053300--Sobic001G404600 Sobic008G033500 Sobic008G033500 Sobic008G053300--Sobic008G033500 Sobic001G355800 Sobic001G355800 Sobic008G053300--Sobic001G355800 Sobic001G251100 Sobic001G251100 Sobic008G088806--Sobic001G251100 Sobic002G133300 Sobic002G133300 Sobic008G088806--Sobic002G133300 Sobic008G070800 Sobic008G070800 Sobic008G088806--Sobic008G070800 Sobic003G176000 Sobic003G176000 Sobic008G088806--Sobic003G176000 Sobic009G132700 Sobic009G132700 Sobic008G088806--Sobic009G132700 Sobic008G088806--Sobic001G333100 Sobic009G251500 Sobic009G251500 Sobic008G088806--Sobic009G251500 Sobic009G256900 Sobic009G256900 Sobic008G088806--Sobic009G256900 Sobic009G002300 Sobic009G002300 Sobic008G088806--Sobic009G002300 Sobic009G068500 Sobic009G068500 Sobic001G193300--Sobic009G068500 Sobic008G089100 Sobic008G089100 Sobic001G193300--Sobic008G089100 Sobic004G257100 Sobic004G257100 Sobic001G193300--Sobic004G257100 Sobic002G359400 Sobic002G359400 Sobic001G193300--Sobic002G359400 Sobic001G193300--Sobic008G033500 Sobic004G202500 Sobic004G202500 Sobic001G193300--Sobic004G202500 Sobic001G193300--Sobic003G176000 Sobic001G007000 Sobic001G007000 Sobic001G193300--Sobic001G007000 Sobic008G124900 Sobic008G124900 Sobic001G193300--Sobic008G124900 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G192000 Sobic001G192000 Sobic001G333100--Sobic001G192000 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G333100--Sobic001G251100 Sobic001G333100--Sobic008G033500 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic003G338500 Sobic003G338500 Sobic010G020400--Sobic003G338500 Sobic001G014800 Sobic001G014800 Sobic010G020400--Sobic001G014800 Sobic002G008800 Sobic002G008800 Sobic010G020400--Sobic002G008800 Sobic008G055900 Sobic008G055900 Sobic010G020400--Sobic008G055900 Sobic010G020400--Sobic008G033500 Sobic010G020400--Sobic001G333100 Sobic010G020400--Sobic010G223300 Sobic006G180000 Sobic006G180000 Sobic002G047700--Sobic006G180000 Sobic002G047700--Sobic010G020400 Sobic002G047700--Sobic001G007000 Sobic001G031100 Sobic001G031100 Sobic002G047700--Sobic001G031100 Sobic007G167900 Sobic007G167900 Sobic002G047700--Sobic007G167900 Sobic002G047700--Sobic008G070800 Sobic002G047700--Sobic001G014800 Sobic003G264200 Sobic003G264200 Sobic002G047700--Sobic003G264200 Sobic009G044800 Sobic009G044800 Sobic002G047700--Sobic009G044800 Sobic002G020700--Sobic010G020400 Sobic008G085700 Sobic008G085700 Sobic002G020700--Sobic008G085700 Sobic002G020700--Sobic008G055900 Sobic002G020700--Sobic001G333100 Sobic002G020700--Sobic010G223300 Sobic001G449900 Sobic001G449900 Sobic002G020700--Sobic001G449900 Sobic004G039600 Sobic004G039600 Sobic002G020700--Sobic004G039600 Sobic008G082500 Sobic008G082500 Sobic002G020700--Sobic008G082500 Sobic007G054800 Sobic007G054800 Sobic002G020700--Sobic007G054800 Sobic008G124800 Sobic008G124800 Sobic001G404600--Sobic008G124800 Sobic003G233400 Sobic003G233400 Sobic001G404600--Sobic003G233400 Sobic002G308500 Sobic002G308500 Sobic001G404600--Sobic002G308500 Sobic001G287500 Sobic001G287500 Sobic001G404600--Sobic001G287500 Sobic001G404600--Sobic002G020700 Sobic009G084900 Sobic009G084900 Sobic001G404600--Sobic009G084900 Sobic004G322400 Sobic004G322400 Sobic001G404600--Sobic004G322400 Sobic006G021700 Sobic006G021700 Sobic001G404600--Sobic006G021700 Sobic001G301200 Sobic001G301200 Sobic001G404600--Sobic001G301200 Sobic008G033500--Sobic010G020400 Sobic008G033500--Sobic001G014800 Sobic008G033500--Sobic001G333100 Sobic008G033500--Sobic002G020700 Sobic007G162100 Sobic007G162100 Sobic008G033500--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic008G033500--Sobic006G127600 Sobic003G422900 Sobic003G422900 Sobic008G033500--Sobic003G422900 Sobic008G033500--Sobic009G068500 Sobic008G033500--Sobic001G193300 Sobic002G131200 Sobic002G131200 Sobic001G355800--Sobic002G131200 Sobic001G355800--Sobic001G192000 Sobic001G355800--Sobic001G333100 Sobic009G201300 Sobic009G201300 Sobic001G355800--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic001G355800--Sobic003G354600 Sobic002G305000 Sobic002G305000 Sobic001G355800--Sobic002G305000 Sobic003G311900 Sobic003G311900 Sobic001G355800--Sobic003G311900 Sobic003G119600 Sobic003G119600 Sobic001G355800--Sobic003G119600 Sobic002G091600 Sobic002G091600 Sobic001G355800--Sobic002G091600
Octagon: transcription factors


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