Gene annotation
Transcriptome id Sobic.002G051800.1
Synonym EOL1, Sb02g004360
Functional annotation BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed
UniProt C5XB02
Pfam PF07719 PF13414
Panther DB PTHR23083 PTHR23083:SF430
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02680 : ETO1-like 1
RAP-DB (Rice) LOC_Os07g08120.2 : BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed
MaizeGDB (Corn) Zm00025a045162
Brachypodium PNT76920 , PNT76921 , KQK20614
Barley -
Wheat -
Populus PNT47847 , PNT47845 , PNT47849 , PNT47848 , PNT37950 , PNT37951 , PNT37945 , PNT37944 , PNT37947 , PNT37946 , PNT37949 , PNT37948


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G250900 AAA-type ATPase family protein, putative, expressed -
2 Sobic.003G314700 expressed protein -
3 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
4 Sobic.007G145400 expressed protein -
5 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
6 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
7 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
8 Sobic.004G336300 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
9 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
10 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
11 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
12 Sobic.008G088842 - -
13 Sobic.007G159200 PWWP domain containing protein, expressed -
14 Sobic.008G092800 expressed protein -
15 Sobic.004G204100 expressed protein -
16 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5
17 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase
18 Sobic.009G118900 expressed protein -
19 Sobic.009G176700 expressed protein -
20 Sobic.007G047600 expressed protein -


Gene co-expression network
sample Sobic002G051800 Sobic002G051800 Sobic003G250900 Sobic003G250900 Sobic002G051800--Sobic003G250900 Sobic003G314700 Sobic003G314700 Sobic002G051800--Sobic003G314700 Sobic001G248100 Sobic001G248100 Sobic002G051800--Sobic001G248100 Sobic007G145400 Sobic007G145400 Sobic002G051800--Sobic007G145400 Sobic008G135200 Sobic008G135200 Sobic002G051800--Sobic008G135200 Sobic002G412700 Sobic002G412700 Sobic002G051800--Sobic002G412700 Sobic010G139500 Sobic010G139500 Sobic002G051800--Sobic010G139500 Sobic004G336300 Sobic004G336300 Sobic002G051800--Sobic004G336300 Sobic001G437400 Sobic001G437400 Sobic002G051800--Sobic001G437400 Sobic003G250900--Sobic001G437400 Sobic002G150800 Sobic002G150800 Sobic003G250900--Sobic002G150800 Sobic001G143600 Sobic001G143600 Sobic003G250900--Sobic001G143600 Sobic003G250900--Sobic003G314700 Sobic010G138900 Sobic010G138900 Sobic003G250900--Sobic010G138900 Sobic009G049200 Sobic009G049200 Sobic003G250900--Sobic009G049200 Sobic006G265600 Sobic006G265600 Sobic003G250900--Sobic006G265600 Sobic003G250900--Sobic002G051800 Sobic006G280100 Sobic006G280100 Sobic003G250900--Sobic006G280100 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic003G314700--Sobic002G412700 Sobic001G248100--Sobic002G412700 Sobic010G000800 Sobic010G000800 Sobic001G248100--Sobic010G000800 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic010G262100 Sobic010G262100 Sobic001G248100--Sobic010G262100 Sobic006G261400 Sobic006G261400 Sobic001G248100--Sobic006G261400 Sobic002G160700 Sobic002G160700 Sobic001G248100--Sobic002G160700 Sobic004G155600 Sobic004G155600 Sobic001G248100--Sobic004G155600 Sobic001G248100--Sobic003G405500 Sobic001G474400 Sobic001G474400 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic007G145400--Sobic001G248100 Sobic002G119600 Sobic002G119600 Sobic007G145400--Sobic002G119600 Sobic007G145400--Sobic006G261400 Sobic007G145400--Sobic003G314700 Sobic001G467100 Sobic001G467100 Sobic007G145400--Sobic001G467100 Sobic008G092800 Sobic008G092800 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic002G020700 Sobic002G020700 Sobic008G135200--Sobic002G020700 Sobic009G045900 Sobic009G045900 Sobic008G135200--Sobic009G045900 Sobic006G073200 Sobic006G073200 Sobic008G135200--Sobic006G073200 Sobic008G157200 Sobic008G157200 Sobic008G135200--Sobic008G157200 Sobic002G350600 Sobic002G350600 Sobic008G135200--Sobic002G350600 Sobic001G251100 Sobic001G251100 Sobic008G135200--Sobic001G251100 Sobic008G135200--Sobic003G029600 Sobic008G033500 Sobic008G033500 Sobic008G135200--Sobic008G033500 Sobic007G054800 Sobic007G054800 Sobic008G135200--Sobic007G054800 Sobic002G412700--Sobic001G248100 Sobic002G412700--Sobic003G405500 Sobic002G412700--Sobic003G314700 Sobic004G034700 Sobic004G034700 Sobic002G412700--Sobic004G034700 Sobic003G209400 Sobic003G209400 Sobic002G412700--Sobic003G209400 Sobic007G047600 Sobic007G047600 Sobic002G412700--Sobic007G047600 Sobic010G085200 Sobic010G085200 Sobic002G412700--Sobic010G085200 Sobic002G412700--Sobic002G119600 Sobic002G412700--Sobic010G139500 Sobic010G139500--Sobic004G204100 Sobic003G334700 Sobic003G334700 Sobic010G139500--Sobic003G334700 Sobic010G139500--Sobic002G119600 Sobic010G139500--Sobic003G314700 Sobic010G139500--Sobic003G405500 Sobic010G139500--Sobic008G124800 Sobic010G139500--Sobic002G412700 Sobic010G139500--Sobic007G145400 Sobic010G070600 Sobic010G070600 Sobic010G139500--Sobic010G070600 Sobic008G072200 Sobic008G072200 Sobic004G336300--Sobic008G072200 Sobic004G034300 Sobic004G034300 Sobic004G336300--Sobic004G034300 Sobic002G070600 Sobic002G070600 Sobic004G336300--Sobic002G070600 Sobic009G118900 Sobic009G118900 Sobic004G336300--Sobic009G118900 Sobic001G117800 Sobic001G117800 Sobic004G336300--Sobic001G117800 Sobic004G336300--Sobic003G334700 Sobic004G174700 Sobic004G174700 Sobic004G336300--Sobic004G174700 Sobic010G178600 Sobic010G178600 Sobic004G336300--Sobic010G178600 Sobic004G336300--Sobic001G437400 Sobic002G340900 Sobic002G340900 Sobic001G437400--Sobic002G340900 Sobic001G437400--Sobic003G314700 Sobic001G437400--Sobic003G250900 Sobic001G437400--Sobic009G118900 Sobic001G437400--Sobic003G029600 Sobic001G437400--Sobic001G117800 Sobic001G437400--Sobic003G334700 Sobic001G437400--Sobic008G124800 Sobic001G437400--Sobic007G019300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.