Gene annotation
Transcriptome id Sobic.009G118900.2,Sobic.009G118900.1
Synonym Sb09g018670
Functional annotation expressed protein
UniProt C5YXA2
Pfam PF05664
Panther DB PTHR31280 PTHR31280:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06970 : Protein of unknown function (DUF810)
RAP-DB (Rice) LOC_Os03g47930.1 : expressed protein
MaizeGDB (Corn) Zm00025a043295 , Zm00025a043296
Brachypodium KQK15101
Barley HORVU2Hr1G041800.13 , HORVU2Hr1G041800.12 , HORVU2Hr1G041800.11 , HORVU2Hr1G041800.10 , HORVU2Hr1G041800.17 , HORVU2Hr1G041800.15 , HORVU2Hr1G041800.14 , HORVU2Hr1G041780.13 , HORVU2Hr1G041780.10 , HORVU2Hr1G041780.15 , HORVU2Hr1G041800.16 , HORVU2Hr1G041780.12 , HORVU2Hr1G041780.11 , HORVU2Hr1G041780.14 , HORVU2Hr1G041810.1 , HORVU2Hr1G041810.2 , HORVU2Hr1G041810.3 , HORVU2Hr1G041800.9 , HORVU2Hr1G041800.8 , HORVU2Hr1G041800.3 , HORVU2Hr1G041800.2 , HORVU2Hr1G041800.7 , HORVU2Hr1G041800.6 , HORVU2Hr1G041800.5 , HORVU2Hr1G041800.4 , HORVU2Hr1G041780.9 , HORVU2Hr1G041780.1 , HORVU2Hr1G041780.5 , HORVU2Hr1G041780.4 , HORVU2Hr1G041780.8 , HORVU2Hr1G041780.2 , HORVU2Hr1G041780.3 , HORVU2Hr1G041780.6 , HORVU2Hr1G041780.7 , HORVU2Hr1G041800.1
Wheat TraesCS1B02G069300 , TraesCS1B02G069300 , TraesCS1B02G069300 , TraesCS1B02G069300 , TraesCS1B02G069300 , TraesCS1A02G052200 , TraesCS1A02G052200 , TraesCS1A02G052200 , TraesCS2D02G215400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
2 Sobic.002G340900 ATMIN7, putative, expressed K13462: guanine nucleotide-exchange factor
3 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
4 Sobic.010G178600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
5 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
6 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
7 Sobic.004G174700 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
8 Sobic.004G336300 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
9 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5
10 Sobic.008G124800 expressed protein -
11 Sobic.004G034300 transducin family protein, putative, expressed -
12 Sobic.001G093800 WD domain containing protein, putative, expressed -
13 Sobic.003G314700 expressed protein -
14 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
15 Sobic.003G250900 AAA-type ATPase family protein, putative, expressed -
16 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
17 Sobic.003G130900 glucosidase II beta subunit-like domain containing protein, expressed K08288: protein kinase C substrate 80K-H
18 Sobic.003G023300 Alg9-like mannosyltransferase protein, putative, expressed K03846: alpha-1,2-mannosyltransferase
19 Sobic.002G150800 WD domain, G-beta repeat domain containing protein, expressed K16547: protein NEDD1
20 Sobic.008G072200 coatomer subunit delta, putative, expressed -


Gene co-expression network
sample Sobic009G118900 Sobic009G118900 Sobic001G117800 Sobic001G117800 Sobic009G118900--Sobic001G117800 Sobic002G340900 Sobic002G340900 Sobic009G118900--Sobic002G340900 Sobic001G437400 Sobic001G437400 Sobic009G118900--Sobic001G437400 Sobic010G178600 Sobic010G178600 Sobic009G118900--Sobic010G178600 Sobic003G029600 Sobic003G029600 Sobic009G118900--Sobic003G029600 Sobic002G070600 Sobic002G070600 Sobic009G118900--Sobic002G070600 Sobic004G174700 Sobic004G174700 Sobic009G118900--Sobic004G174700 Sobic004G336300 Sobic004G336300 Sobic009G118900--Sobic004G336300 Sobic003G334700 Sobic003G334700 Sobic009G118900--Sobic003G334700 Sobic001G117800--Sobic003G029600 Sobic001G117800--Sobic002G070600 Sobic001G117800--Sobic009G118900 Sobic001G117800--Sobic002G340900 Sobic001G474400 Sobic001G474400 Sobic001G117800--Sobic001G474400 Sobic008G072200 Sobic008G072200 Sobic001G117800--Sobic008G072200 Sobic003G314700 Sobic003G314700 Sobic001G117800--Sobic003G314700 Sobic009G120500 Sobic009G120500 Sobic001G117800--Sobic009G120500 Sobic001G117800--Sobic001G437400 Sobic008G124800 Sobic008G124800 Sobic002G340900--Sobic008G124800 Sobic002G340900--Sobic001G437400 Sobic006G021700 Sobic006G021700 Sobic002G340900--Sobic006G021700 Sobic004G053500 Sobic004G053500 Sobic002G340900--Sobic004G053500 Sobic002G340900--Sobic001G117800 Sobic002G340900--Sobic009G118900 Sobic002G340900--Sobic003G029600 Sobic004G223300 Sobic004G223300 Sobic002G340900--Sobic004G223300 Sobic002G340900--Sobic001G474400 Sobic001G437400--Sobic002G340900 Sobic001G437400--Sobic003G314700 Sobic003G250900 Sobic003G250900 Sobic001G437400--Sobic003G250900 Sobic001G437400--Sobic009G118900 Sobic001G437400--Sobic003G029600 Sobic001G437400--Sobic001G117800 Sobic001G437400--Sobic003G334700 Sobic001G437400--Sobic008G124800 Sobic007G019300 Sobic007G019300 Sobic001G437400--Sobic007G019300 Sobic010G178600--Sobic004G174700 Sobic010G178600--Sobic009G118900 Sobic004G034300 Sobic004G034300 Sobic010G178600--Sobic004G034300 Sobic010G178600--Sobic002G070600 Sobic010G178600--Sobic008G072200 Sobic003G134800 Sobic003G134800 Sobic010G178600--Sobic003G134800 Sobic010G178600--Sobic004G336300 Sobic010G178600--Sobic001G117800 Sobic010G178600--Sobic003G029600 Sobic003G029600--Sobic001G117800 Sobic003G029600--Sobic003G314700 Sobic003G029600--Sobic002G070600 Sobic003G029600--Sobic002G340900 Sobic001G301200 Sobic001G301200 Sobic003G029600--Sobic001G301200 Sobic001G449900 Sobic001G449900 Sobic003G029600--Sobic001G449900 Sobic003G029600--Sobic008G124800 Sobic003G029600--Sobic009G118900 Sobic003G029600--Sobic001G437400 Sobic002G070600--Sobic008G072200 Sobic002G070600--Sobic001G117800 Sobic001G161700 Sobic001G161700 Sobic002G070600--Sobic001G161700 Sobic008G085700 Sobic008G085700 Sobic002G070600--Sobic008G085700 Sobic002G070600--Sobic004G336300 Sobic002G070600--Sobic003G029600 Sobic002G070600--Sobic006G021700 Sobic002G070600--Sobic009G118900 Sobic002G070600--Sobic010G178600 Sobic004G174700--Sobic010G178600 Sobic004G174700--Sobic009G118900 Sobic004G174700--Sobic004G336300 Sobic004G174700--Sobic004G034300 Sobic004G174700--Sobic002G070600 Sobic001G380600 Sobic001G380600 Sobic004G174700--Sobic001G380600 Sobic004G348600 Sobic004G348600 Sobic004G174700--Sobic004G348600 Sobic001G011000 Sobic001G011000 Sobic004G174700--Sobic001G011000 Sobic004G212100 Sobic004G212100 Sobic004G174700--Sobic004G212100 Sobic004G336300--Sobic008G072200 Sobic004G336300--Sobic004G034300 Sobic004G336300--Sobic002G070600 Sobic004G336300--Sobic009G118900 Sobic004G336300--Sobic001G117800 Sobic004G336300--Sobic003G334700 Sobic004G336300--Sobic004G174700 Sobic004G336300--Sobic010G178600 Sobic004G336300--Sobic001G437400 Sobic010G139500 Sobic010G139500 Sobic003G334700--Sobic010G139500 Sobic003G334700--Sobic001G437400 Sobic003G334700--Sobic003G314700 Sobic001G118000 Sobic001G118000 Sobic003G334700--Sobic001G118000 Sobic005G059500 Sobic005G059500 Sobic003G334700--Sobic005G059500 Sobic002G119600 Sobic002G119600 Sobic003G334700--Sobic002G119600 Sobic003G293000 Sobic003G293000 Sobic003G334700--Sobic003G293000 Sobic003G334700--Sobic004G336300 Sobic010G000800 Sobic010G000800 Sobic003G334700--Sobic010G000800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.