Gene annotation
Transcriptome id Sobic.003G130900.1,Sobic.003G130900.2
Synonym PSL4, Sb03g011140
Functional annotation glucosidase II beta subunit-like domain containing protein, expressed
UniProt A0A1B6Q2V7 , A0A1B6Q2X0
Pfam PF07915 PF12999
Panther DB PTHR12630 PTHR12630:SF1
NCBI CDD KOG2397; Protein kinase C substrate, 80 KD protein, heavy chain
KEGG Orthology K08288; protein kinase C substrate 80K-H
Gene Ontology GO:0006491; N-glycan processing


Orthologs (automatic annotation)
TAIR AT5G56360 : calmodulin-binding protein
RAP-DB (Rice) LOC_Os01g16970.1 : glucosidase II beta subunit-like domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035203
Brachypodium KQK03899 , KQK03898 , KQK03900
Barley -
Wheat TraesCS3D02G192900 , TraesCS3D02G192900 , TraesCS3D02G192900 , TraesCS3B02G218600 , TraesCS3B02G218600 , TraesCS3B02G218600
Populus -


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cDNA sequences
Sobic.003G130900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G114500 growth regulator related protein, putative, expressed -
2 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
3 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
4 Sobic.001G445500 coatomer subunit gamma-1, putative, expressed K17267: coatomer subunit gamma
5 Sobic.004G151200 RNA-binding protein-like, putative, expressed -
6 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
7 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
8 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
9 Sobic.005G059500 expressed protein -
10 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
11 Sobic.004G034300 transducin family protein, putative, expressed -
12 Sobic.001G097900 expressed protein -
13 Sobic.003G113300 expressed protein -
14 Sobic.004G060300 DNA binding protein, putative, expressed -
15 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
16 Sobic.009G122500 expressed protein -
17 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
18 Sobic.003G143800 nodal modulator 1 precursor, putative, expressed -
19 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
20 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3


Gene co-expression network
sample Sobic003G130900 Sobic003G130900 Sobic005G114500 Sobic005G114500 Sobic003G130900--Sobic005G114500 Sobic001G455000 Sobic001G455000 Sobic003G130900--Sobic001G455000 Sobic003G005900 Sobic003G005900 Sobic003G130900--Sobic003G005900 Sobic001G445500 Sobic001G445500 Sobic003G130900--Sobic001G445500 Sobic004G151200 Sobic004G151200 Sobic003G130900--Sobic004G151200 Sobic006G265600 Sobic006G265600 Sobic003G130900--Sobic006G265600 Sobic001G012900 Sobic001G012900 Sobic003G130900--Sobic001G012900 Sobic002G182000 Sobic002G182000 Sobic003G130900--Sobic002G182000 Sobic005G059500 Sobic005G059500 Sobic003G130900--Sobic005G059500 Sobic005G114500--Sobic003G130900 Sobic003G230600 Sobic003G230600 Sobic005G114500--Sobic003G230600 Sobic001G474400 Sobic001G474400 Sobic005G114500--Sobic001G474400 Sobic010G223400 Sobic010G223400 Sobic005G114500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic005G114500--Sobic001G308400 Sobic005G114500--Sobic003G005900 Sobic005G114500--Sobic005G059500 Sobic005G110499 Sobic005G110499 Sobic005G114500--Sobic005G110499 Sobic009G122500 Sobic009G122500 Sobic005G114500--Sobic009G122500 Sobic001G455000--Sobic004G151200 Sobic003G397900 Sobic003G397900 Sobic001G455000--Sobic003G397900 Sobic007G118500 Sobic007G118500 Sobic001G455000--Sobic007G118500 Sobic008G019532 Sobic008G019532 Sobic001G455000--Sobic008G019532 Sobic001G356100 Sobic001G356100 Sobic001G455000--Sobic001G356100 Sobic001G455000--Sobic003G130900 Sobic001G114200 Sobic001G114200 Sobic001G455000--Sobic001G114200 Sobic001G455000--Sobic001G445500 Sobic003G394500 Sobic003G394500 Sobic001G455000--Sobic003G394500 Sobic003G005900--Sobic005G114500 Sobic003G005900--Sobic003G130900 Sobic003G005900--Sobic006G265600 Sobic003G293000 Sobic003G293000 Sobic003G005900--Sobic003G293000 Sobic003G005900--Sobic001G474400 Sobic003G005900--Sobic004G151200 Sobic003G005900--Sobic001G012900 Sobic002G014800 Sobic002G014800 Sobic003G005900--Sobic002G014800 Sobic009G207200 Sobic009G207200 Sobic003G005900--Sobic009G207200 Sobic003G346400 Sobic003G346400 Sobic001G445500--Sobic003G346400 Sobic001G097900 Sobic001G097900 Sobic001G445500--Sobic001G097900 Sobic001G445500--Sobic001G455000 Sobic001G445500--Sobic003G397900 Sobic006G203300 Sobic006G203300 Sobic001G445500--Sobic006G203300 Sobic010G171000 Sobic010G171000 Sobic001G445500--Sobic010G171000 Sobic001G445500--Sobic003G130900 Sobic001G374000 Sobic001G374000 Sobic001G445500--Sobic001G374000 Sobic005G114800 Sobic005G114800 Sobic001G445500--Sobic005G114800 Sobic004G151200--Sobic001G455000 Sobic004G277400 Sobic004G277400 Sobic004G151200--Sobic004G277400 Sobic004G151200--Sobic003G130900 Sobic004G151200--Sobic003G397900 Sobic004G151200--Sobic003G005900 Sobic001G151600 Sobic001G151600 Sobic004G151200--Sobic001G151600 Sobic004G151200--Sobic001G445500 Sobic005G022100 Sobic005G022100 Sobic004G151200--Sobic005G022100 Sobic004G151200--Sobic006G265600 Sobic006G265600--Sobic003G397900 Sobic006G265600--Sobic001G474400 Sobic002G399900 Sobic002G399900 Sobic006G265600--Sobic002G399900 Sobic006G265600--Sobic003G005900 Sobic006G265600--Sobic001G151600 Sobic002G075900 Sobic002G075900 Sobic006G265600--Sobic002G075900 Sobic002G160700 Sobic002G160700 Sobic006G265600--Sobic002G160700 Sobic009G120500 Sobic009G120500 Sobic006G265600--Sobic009G120500 Sobic002G364900 Sobic002G364900 Sobic006G265600--Sobic002G364900 Sobic001G012900--Sobic003G293000 Sobic001G193100 Sobic001G193100 Sobic001G012900--Sobic001G193100 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic004G060300 Sobic004G060300 Sobic001G012900--Sobic004G060300 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500 Sobic009G063800 Sobic009G063800 Sobic002G182000--Sobic009G063800 Sobic002G182000--Sobic002G399900 Sobic001G343000 Sobic001G343000 Sobic002G182000--Sobic001G343000 Sobic001G203600 Sobic001G203600 Sobic002G182000--Sobic001G203600 Sobic007G146600 Sobic007G146600 Sobic002G182000--Sobic007G146600 Sobic002G182000--Sobic003G130900 Sobic002G066800 Sobic002G066800 Sobic002G182000--Sobic002G066800 Sobic010G172400 Sobic010G172400 Sobic002G182000--Sobic010G172400 Sobic003G113300 Sobic003G113300 Sobic002G182000--Sobic003G113300 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic001G118000 Sobic001G118000 Sobic005G059500--Sobic001G118000 Sobic005G059500--Sobic010G223400 Sobic005G059500--Sobic001G012900 Sobic005G059500--Sobic003G346400 Sobic005G059500--Sobic005G114500 Sobic005G059500--Sobic001G474400 Sobic005G059500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic005G059500--Sobic002G070600
Octagon: transcription factors


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