Gene annotation
Transcriptome id Sobic.001G445500.3,Sobic.001G445500.1
Synonym Sb01g041860
Functional annotation coatomer subunit gamma-1, putative, expressed
UniProt A0A1Z5SAK4 , A0A1Z5SAJ6
Pfam PF16381 PF08752 PF01602
Panther DB PTHR10261 PTHR10261:SF5
NCBI CDD -
KEGG Orthology K17267; coatomer subunit gamma
Gene Ontology GO:0016192; vesicle-mediated transport GO:0006886intracellular protein transport GO:0005198structural molecule activity


Orthologs (automatic annotation)
TAIR AT4G34450 : coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative
RAP-DB (Rice) LOC_Os03g12590.1 : coatomer subunit gamma-1, putative, expressed
MaizeGDB (Corn) Zm00025a001448
Brachypodium KQK22719 , KQK22718
Barley HORVU4Hr1G065380.1 , HORVU4Hr1G065380.2 , HORVU4Hr1G065380.3 , HORVU4Hr1G065380.4 , HORVU4Hr1G065380.5 , HORVU4Hr1G065380.6 , HORVU4Hr1G065380.7
Wheat TraesCS4A02G077600 , TraesCS4B02G233700 , TraesCS4B02G233700 , TraesCS4A02G077600 , TraesCS4D02G234800
Populus -


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cDNA sequences
Sobic.001G445500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
2 Sobic.001G097900 expressed protein -
3 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
4 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
5 Sobic.006G203300 GPR89A, putative, expressed -
6 Sobic.010G171000 phospholipid-transporting ATPase 4, putative, expressed K01530: phospholipid-translocating ATPase
7 Sobic.003G130900 glucosidase II beta subunit-like domain containing protein, expressed K08288: protein kinase C substrate 80K-H
8 Sobic.001G374000 cation efflux family protein, putative, expressed -
9 Sobic.005G114800 protein transport protein, putative, expressed K14007: protein transport protein SEC24
10 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
11 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
12 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
13 Sobic.004G151200 RNA-binding protein-like, putative, expressed -
14 Sobic.010G223400 expressed protein -
15 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
16 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
18 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
19 Sobic.001G097500 expressed protein -
20 Sobic.008G019532 - -


Gene co-expression network
sample Sobic001G445500 Sobic001G445500 Sobic003G346400 Sobic003G346400 Sobic001G445500--Sobic003G346400 Sobic001G097900 Sobic001G097900 Sobic001G445500--Sobic001G097900 Sobic001G455000 Sobic001G455000 Sobic001G445500--Sobic001G455000 Sobic003G397900 Sobic003G397900 Sobic001G445500--Sobic003G397900 Sobic006G203300 Sobic006G203300 Sobic001G445500--Sobic006G203300 Sobic010G171000 Sobic010G171000 Sobic001G445500--Sobic010G171000 Sobic003G130900 Sobic003G130900 Sobic001G445500--Sobic003G130900 Sobic001G374000 Sobic001G374000 Sobic001G445500--Sobic001G374000 Sobic005G114800 Sobic005G114800 Sobic001G445500--Sobic005G114800 Sobic004G254800 Sobic004G254800 Sobic003G346400--Sobic004G254800 Sobic006G021700 Sobic006G021700 Sobic003G346400--Sobic006G021700 Sobic004G060300 Sobic004G060300 Sobic003G346400--Sobic004G060300 Sobic003G394200 Sobic003G394200 Sobic003G346400--Sobic003G394200 Sobic003G346400--Sobic006G203300 Sobic003G346400--Sobic001G445500 Sobic003G209200 Sobic003G209200 Sobic003G346400--Sobic003G209200 Sobic001G161700 Sobic001G161700 Sobic003G346400--Sobic001G161700 Sobic001G012900 Sobic001G012900 Sobic003G346400--Sobic001G012900 Sobic010G192600 Sobic010G192600 Sobic001G097900--Sobic010G192600 Sobic001G474400 Sobic001G474400 Sobic001G097900--Sobic001G474400 Sobic001G097900--Sobic001G445500 Sobic006G106300 Sobic006G106300 Sobic001G097900--Sobic006G106300 Sobic005G110499 Sobic005G110499 Sobic001G097900--Sobic005G110499 Sobic002G227500 Sobic002G227500 Sobic001G097900--Sobic002G227500 Sobic001G308400 Sobic001G308400 Sobic001G097900--Sobic001G308400 Sobic009G040250 Sobic009G040250 Sobic001G097900--Sobic009G040250 Sobic005G114500 Sobic005G114500 Sobic001G097900--Sobic005G114500 Sobic004G151200 Sobic004G151200 Sobic001G455000--Sobic004G151200 Sobic001G455000--Sobic003G397900 Sobic007G118500 Sobic007G118500 Sobic001G455000--Sobic007G118500 Sobic008G019532 Sobic008G019532 Sobic001G455000--Sobic008G019532 Sobic001G356100 Sobic001G356100 Sobic001G455000--Sobic001G356100 Sobic001G455000--Sobic003G130900 Sobic001G114200 Sobic001G114200 Sobic001G455000--Sobic001G114200 Sobic001G455000--Sobic001G445500 Sobic003G394500 Sobic003G394500 Sobic001G455000--Sobic003G394500 Sobic003G397900--Sobic001G455000 Sobic006G265600 Sobic006G265600 Sobic003G397900--Sobic006G265600 Sobic003G397900--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic003G397900--Sobic003G304400 Sobic002G075900 Sobic002G075900 Sobic003G397900--Sobic002G075900 Sobic003G397900--Sobic001G445500 Sobic001G151600 Sobic001G151600 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic010G223400 Sobic010G223400 Sobic003G397900--Sobic010G223400 Sobic006G203300--Sobic003G394200 Sobic006G203300--Sobic003G346400 Sobic010G169900 Sobic010G169900 Sobic006G203300--Sobic010G169900 Sobic004G236200 Sobic004G236200 Sobic006G203300--Sobic004G236200 Sobic006G203300--Sobic001G445500 Sobic006G203300--Sobic004G254800 Sobic006G203300--Sobic001G308400 Sobic006G203300--Sobic001G474400 Sobic003G036500 Sobic003G036500 Sobic006G203300--Sobic003G036500 Sobic010G171000--Sobic001G445500 Sobic010G065200 Sobic010G065200 Sobic010G171000--Sobic010G065200 Sobic010G171000--Sobic008G019532 Sobic010G171000--Sobic001G455000 Sobic010G171000--Sobic001G374000 Sobic002G117600 Sobic002G117600 Sobic010G171000--Sobic002G117600 Sobic010G160300 Sobic010G160300 Sobic010G171000--Sobic010G160300 Sobic010G171000--Sobic001G114200 Sobic010G171000--Sobic003G346400 Sobic003G130900--Sobic005G114500 Sobic003G130900--Sobic001G455000 Sobic003G005900 Sobic003G005900 Sobic003G130900--Sobic003G005900 Sobic003G130900--Sobic001G445500 Sobic003G130900--Sobic004G151200 Sobic003G130900--Sobic006G265600 Sobic003G130900--Sobic001G012900 Sobic002G182000 Sobic002G182000 Sobic003G130900--Sobic002G182000 Sobic005G059500 Sobic005G059500 Sobic003G130900--Sobic005G059500 Sobic001G374000--Sobic001G445500 Sobic001G374000--Sobic010G171000 Sobic001G374000--Sobic001G356100 Sobic001G374000--Sobic010G160300 Sobic001G374000--Sobic009G040250 Sobic001G399700 Sobic001G399700 Sobic001G374000--Sobic001G399700 Sobic001G374000--Sobic001G114200 Sobic002G304700 Sobic002G304700 Sobic001G374000--Sobic002G304700 Sobic006G232800 Sobic006G232800 Sobic001G374000--Sobic006G232800 Sobic003G150900 Sobic003G150900 Sobic005G114800--Sobic003G150900 Sobic009G166600 Sobic009G166600 Sobic005G114800--Sobic009G166600 Sobic005G114800--Sobic005G110499 Sobic001G393700 Sobic001G393700 Sobic005G114800--Sobic001G393700 Sobic005G114800--Sobic001G474400 Sobic001G103300 Sobic001G103300 Sobic005G114800--Sobic001G103300 Sobic005G114800--Sobic003G394200 Sobic005G114800--Sobic001G445500 Sobic006G224800 Sobic006G224800 Sobic005G114800--Sobic006G224800
Octagon: transcription factors


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