Gene annotation
Transcriptome id Sobic.001G161700.1
Synonym Sb01g014140, NSF
Functional annotation vesicle-fusing ATPase, putative, expressed
UniProt C5WS54
Pfam PF02933 PF07724 PF02359 PF00004
Panther DB PTHR23078
NCBI CDD -
KEGG Orthology K06027; NSF, vesicle-fusing ATPase
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT4G04910 : AAA-type ATPase family protein
RAP-DB (Rice) LOC_Os05g44310.1 : vesicle-fusing ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a044334 , Zm00025a028785 , Zm00025a032134 , Zm00025a037048
Brachypodium KQK05348
Barley HORVU1Hr1G076180.6 , HORVU1Hr1G076180.35 , HORVU1Hr1G076180.34 , HORVU1Hr1G076180.36 , HORVU1Hr1G076180.31 , HORVU1Hr1G076180.30 , HORVU1Hr1G076180.33 , HORVU1Hr1G076180.32 , HORVU1Hr1G076180.9 , HORVU1Hr1G076180.8 , HORVU1Hr1G076180.2 , HORVU1Hr1G076180.1 , HORVU1Hr1G076180.7 , HORVU1Hr1G076180.5 , HORVU1Hr1G076180.4 , HORVU1Hr1G076180.22 , HORVU1Hr1G076180.23 , HORVU1Hr1G076180.20 , HORVU1Hr1G076180.21 , HORVU1Hr1G076180.26 , HORVU1Hr1G076180.27 , HORVU1Hr1G076180.24 , HORVU1Hr1G076180.25 , HORVU1Hr1G076180.28 , HORVU1Hr1G076180.29 , HORVU1Hr1G076180.19 , HORVU1Hr1G076180.18 , HORVU1Hr1G076180.13 , HORVU1Hr1G076180.12 , HORVU1Hr1G076180.11 , HORVU1Hr1G076180.10 , HORVU1Hr1G076180.17 , HORVU1Hr1G076180.16 , HORVU1Hr1G076180.15 , HORVU1Hr1G076180.14 , HORVU1Hr1G076180.3
Wheat TraesCS1D02G341900 , TraesCS1D02G341900 , TraesCS1A02G339900 , TraesCS1B02G352200 , TraesCS1B02G352200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
2 Sobic.008G072200 coatomer subunit delta, putative, expressed -
3 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
4 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
5 Sobic.001G023100 ACBP4, putative, expressed -
6 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
7 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
8 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
9 Sobic.008G085700 exocyst complex component 5, putative, expressed -
10 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
11 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
13 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
14 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
15 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
16 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
17 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
18 Sobic.010G223400 expressed protein -
19 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
20 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G161700 Sobic001G161700 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic002G070600--Sobic008G072200 Sobic001G117800 Sobic001G117800 Sobic002G070600--Sobic001G117800 Sobic002G070600--Sobic001G161700 Sobic002G070600--Sobic008G085700 Sobic004G336300 Sobic004G336300 Sobic002G070600--Sobic004G336300 Sobic003G029600 Sobic003G029600 Sobic002G070600--Sobic003G029600 Sobic006G021700 Sobic006G021700 Sobic002G070600--Sobic006G021700 Sobic009G118900 Sobic009G118900 Sobic002G070600--Sobic009G118900 Sobic010G178600 Sobic010G178600 Sobic002G070600--Sobic010G178600 Sobic008G072200--Sobic002G070600 Sobic008G072200--Sobic001G161700 Sobic008G072200--Sobic004G336300 Sobic001G115700 Sobic001G115700 Sobic008G072200--Sobic001G115700 Sobic008G072200--Sobic001G117800 Sobic002G029300 Sobic002G029300 Sobic008G072200--Sobic002G029300 Sobic008G072200--Sobic001G490500 Sobic003G134800 Sobic003G134800 Sobic008G072200--Sobic003G134800 Sobic008G072200--Sobic008G085700 Sobic001G490500--Sobic001G161700 Sobic001G220900 Sobic001G220900 Sobic001G490500--Sobic001G220900 Sobic001G490500--Sobic001G117800 Sobic001G490500--Sobic002G070600 Sobic001G490500--Sobic008G072200 Sobic001G077900 Sobic001G077900 Sobic001G490500--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G490500--Sobic001G522000 Sobic001G338400 Sobic001G338400 Sobic001G490500--Sobic001G338400 Sobic001G490500--Sobic003G029600 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G193100 Sobic001G193100 Sobic001G012900--Sobic001G193100 Sobic005G059500 Sobic005G059500 Sobic001G012900--Sobic005G059500 Sobic001G012900--Sobic001G161700 Sobic004G060300 Sobic004G060300 Sobic001G012900--Sobic004G060300 Sobic010G223400 Sobic010G223400 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic009G122500 Sobic009G122500 Sobic001G012900--Sobic009G122500 Sobic001G023100--Sobic002G029300 Sobic007G173700 Sobic007G173700 Sobic001G023100--Sobic007G173700 Sobic009G226400 Sobic009G226400 Sobic001G023100--Sobic009G226400 Sobic008G055900 Sobic008G055900 Sobic001G023100--Sobic008G055900 Sobic001G023100--Sobic001G161700 Sobic001G023100--Sobic008G072200 Sobic001G023100--Sobic001G193100 Sobic003G270600 Sobic003G270600 Sobic001G023100--Sobic003G270600 Sobic001G023100--Sobic008G085700 Sobic003G346400--Sobic004G254800 Sobic003G346400--Sobic006G021700 Sobic003G346400--Sobic004G060300 Sobic003G394200 Sobic003G394200 Sobic003G346400--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic003G346400--Sobic006G203300 Sobic001G445500 Sobic001G445500 Sobic003G346400--Sobic001G445500 Sobic003G209200 Sobic003G209200 Sobic003G346400--Sobic003G209200 Sobic003G346400--Sobic001G161700 Sobic003G346400--Sobic001G012900 Sobic004G000100--Sobic007G173700 Sobic001G443200 Sobic001G443200 Sobic004G000100--Sobic001G443200 Sobic001G465400 Sobic001G465400 Sobic004G000100--Sobic001G465400 Sobic004G000100--Sobic001G161700 Sobic008G102600 Sobic008G102600 Sobic004G000100--Sobic008G102600 Sobic004G347600 Sobic004G347600 Sobic004G000100--Sobic004G347600 Sobic004G000100--Sobic001G077900 Sobic004G000100--Sobic001G023100 Sobic004G000100--Sobic002G029300 Sobic004G254800--Sobic003G346400 Sobic001G389200 Sobic001G389200 Sobic004G254800--Sobic001G389200 Sobic004G078700 Sobic004G078700 Sobic004G254800--Sobic004G078700 Sobic004G254800--Sobic003G394200 Sobic004G254800--Sobic001G161700 Sobic004G254800--Sobic009G122500 Sobic004G254800--Sobic004G060300 Sobic002G395500 Sobic002G395500 Sobic004G254800--Sobic002G395500 Sobic003G394500 Sobic003G394500 Sobic004G254800--Sobic003G394500 Sobic002G020700 Sobic002G020700 Sobic008G085700--Sobic002G020700 Sobic001G449900 Sobic001G449900 Sobic008G085700--Sobic001G449900 Sobic008G085700--Sobic002G070600 Sobic010G020400 Sobic010G020400 Sobic008G085700--Sobic010G020400 Sobic008G085700--Sobic008G055900 Sobic005G110499 Sobic005G110499 Sobic008G085700--Sobic005G110499 Sobic001G049400 Sobic001G049400 Sobic008G085700--Sobic001G049400 Sobic008G085700--Sobic001G161700 Sobic010G192600 Sobic010G192600 Sobic008G085700--Sobic010G192600
Octagon: transcription factors


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