Gene annotation
Transcriptome id Sobic.001G012900.1,Sobic.001G012900.2
Synonym Sb01g001270
Functional annotation brefeldin A-sensitive Golgi protein-like, putative, expressed
UniProt C5WSX1
Pfam PF12022 PF06148
Panther DB PTHR12961
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015031protein transport GO:0007030Golgi organization


Orthologs (automatic annotation)
TAIR AT4G24840 : -
RAP-DB (Rice) LOC_Os03g63250.1 : brefeldin A-sensitive Golgi protein-like, putative, expressed
MaizeGDB (Corn) Zm00025a016332 , Zm00025a009025
Brachypodium KQK12123
Barley HORVU5Hr1G121540.1 , HORVU5Hr1G121540.2 , HORVU5Hr1G121540.3 , HORVU5Hr1G121540.4
Wheat TraesCS4A02G335400 , TraesCS5D02G536700 , TraesCS5B02G549700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G293000 expressed protein -
2 Sobic.001G193100 expressed protein -
3 Sobic.005G059500 expressed protein -
4 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
5 Sobic.004G060300 DNA binding protein, putative, expressed -
6 Sobic.010G223400 expressed protein -
7 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
8 Sobic.001G335000 erlin-2 precursor, putative, expressed -
9 Sobic.009G122500 expressed protein -
10 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
11 Sobic.005G114500 growth regulator related protein, putative, expressed -
12 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
13 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
14 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
15 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
16 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
18 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
19 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
20 Sobic.003G130900 glucosidase II beta subunit-like domain containing protein, expressed K08288: protein kinase C substrate 80K-H


Gene co-expression network
sample Sobic001G012900 Sobic001G012900 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G193100 Sobic001G193100 Sobic001G012900--Sobic001G193100 Sobic005G059500 Sobic005G059500 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic004G060300 Sobic004G060300 Sobic001G012900--Sobic004G060300 Sobic010G223400 Sobic010G223400 Sobic001G012900--Sobic010G223400 Sobic003G346400 Sobic003G346400 Sobic001G012900--Sobic003G346400 Sobic001G335000 Sobic001G335000 Sobic001G012900--Sobic001G335000 Sobic009G122500 Sobic009G122500 Sobic001G012900--Sobic009G122500 Sobic003G240700 Sobic003G240700 Sobic003G293000--Sobic003G240700 Sobic003G293000--Sobic001G012900 Sobic009G049400 Sobic009G049400 Sobic003G293000--Sobic009G049400 Sobic001G335900 Sobic001G335900 Sobic003G293000--Sobic001G335900 Sobic003G005900 Sobic003G005900 Sobic003G293000--Sobic003G005900 Sobic003G334700 Sobic003G334700 Sobic003G293000--Sobic003G334700 Sobic003G293000--Sobic005G059500 Sobic001G474400 Sobic001G474400 Sobic003G293000--Sobic001G474400 Sobic003G314700 Sobic003G314700 Sobic003G293000--Sobic003G314700 Sobic001G193100--Sobic010G223400 Sobic003G394200 Sobic003G394200 Sobic001G193100--Sobic003G394200 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic004G084500 Sobic004G084500 Sobic001G193100--Sobic004G084500 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic001G118000 Sobic001G118000 Sobic005G059500--Sobic001G118000 Sobic005G059500--Sobic010G223400 Sobic005G059500--Sobic001G012900 Sobic005G059500--Sobic003G346400 Sobic005G114500 Sobic005G114500 Sobic005G059500--Sobic005G114500 Sobic005G059500--Sobic001G474400 Sobic005G059500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic005G059500--Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G161700--Sobic001G012900 Sobic001G023100 Sobic001G023100 Sobic001G161700--Sobic001G023100 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic007G118500 Sobic007G118500 Sobic004G060300--Sobic007G118500 Sobic004G060300--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic004G060300--Sobic003G394500 Sobic004G060300--Sobic001G335000 Sobic004G060300--Sobic003G346400 Sobic007G030100 Sobic007G030100 Sobic004G060300--Sobic007G030100 Sobic001G389200 Sobic001G389200 Sobic004G060300--Sobic001G389200 Sobic004G060300--Sobic004G084500 Sobic004G060300--Sobic001G012900 Sobic010G223400--Sobic009G122500 Sobic010G223400--Sobic003G394200 Sobic010G223400--Sobic005G059500 Sobic010G223400--Sobic001G193100 Sobic003G182300 Sobic003G182300 Sobic010G223400--Sobic003G182300 Sobic010G223400--Sobic005G114500 Sobic010G223400--Sobic001G474400 Sobic010G223400--Sobic004G078700 Sobic010G223400--Sobic001G012900 Sobic003G346400--Sobic004G254800 Sobic003G346400--Sobic006G021700 Sobic003G346400--Sobic004G060300 Sobic003G346400--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic003G346400--Sobic006G203300 Sobic001G445500 Sobic001G445500 Sobic003G346400--Sobic001G445500 Sobic003G209200 Sobic003G209200 Sobic003G346400--Sobic003G209200 Sobic003G346400--Sobic001G161700 Sobic003G346400--Sobic001G012900 Sobic001G335000--Sobic009G122500 Sobic001G335000--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic001G335000--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic001G335000--Sobic004G122900 Sobic001G335000--Sobic001G012900 Sobic001G043200 Sobic001G043200 Sobic001G335000--Sobic001G043200 Sobic001G335000--Sobic001G193100 Sobic003G181700 Sobic003G181700 Sobic001G335000--Sobic003G181700 Sobic001G335000--Sobic007G118500 Sobic009G122500--Sobic001G335000 Sobic009G122500--Sobic004G060300 Sobic009G122500--Sobic001G156900 Sobic009G122500--Sobic004G122900 Sobic009G122500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic009G122500--Sobic001G308400 Sobic009G122500--Sobic003G394200 Sobic009G122500--Sobic001G389200 Sobic009G122500--Sobic001G118000
Octagon: transcription factors


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