Gene annotation
Transcriptome id Sobic.004G084500.2
Synonym Sb04g006960
Functional annotation GPI-anchor transamidase precursor, putative, expressed
UniProt A0A1Z5RLF9
Pfam PF01650
Panther DB PTHR12000 PTHR12000:SF1
NCBI CDD KOG1349; Gpi-anchor transamidase
KEGG Orthology K05290; GPI-anchor transamidase subunit K
Gene Ontology GO:0008233; peptidase activity GO:0006508proteolysis GO:0016255attachment of GPI anchor to protein GO:0003923GPI-anchor transamidase activity


Orthologs (automatic annotation)
TAIR AT1G08750 : Peptidase C13 family
RAP-DB (Rice) LOC_Os02g12740.1 : GPI-anchor transamidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a019537 , Zm00025a034613
Brachypodium KQJ94049
Barley HORVU1Hr1G012420.10 , HORVU6Hr1G039550.2 , HORVU6Hr1G039550.3 , HORVU6Hr1G039550.1 , HORVU6Hr1G039550.6 , HORVU6Hr1G039550.7 , HORVU6Hr1G039550.4 , HORVU6Hr1G039550.5 , HORVU6Hr1G039550.8 , HORVU6Hr1G039550.9 , HORVU6Hr1G039550.11 , HORVU6Hr1G039550.12 , HORVU6Hr1G039550.10 , HORVU6Hr1G039550.13 , HORVU1Hr1G012420.8 , HORVU1Hr1G012420.9 , HORVU1Hr1G012420.6 , HORVU1Hr1G012420.7 , HORVU1Hr1G012420.4 , HORVU1Hr1G012420.5 , HORVU1Hr1G012420.2 , HORVU1Hr1G012420.3 , HORVU1Hr1G012420.1
Wheat TraesCS6B02G214200 , TraesCS6B02G214200 , TraesCS6D02G172500 , TraesCS6D02G172500 , TraesCS6D02G172500 , TraesCS1B02G078600 , TraesCS1D02G061100 , TraesCS6A02G185500 , TraesCS6A02G185500 , TraesCS1A02G060100
Populus -


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cDNA sequences
Sobic.004G084500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
2 Sobic.004G060300 DNA binding protein, putative, expressed -
3 Sobic.009G122500 expressed protein -
4 Sobic.001G193100 expressed protein -
5 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
6 Sobic.003G398400 expressed protein -
7 Sobic.010G074900 G protein coupled receptor, putative, expressed -
8 Sobic.006G128100 lipase, putative, expressed -
9 Sobic.006G224300 APO, putative, expressed -
10 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
11 Sobic.006G203300 GPR89A, putative, expressed -
12 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
13 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
14 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
15 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
16 Sobic.001G490900 growth regulator related protein, putative, expressed -
17 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
18 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
19 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
20 Sobic.001G308400 expressed protein -


Gene co-expression network
sample Sobic004G084500 Sobic004G084500 Sobic003G394200 Sobic003G394200 Sobic004G084500--Sobic003G394200 Sobic004G060300 Sobic004G060300 Sobic004G084500--Sobic004G060300 Sobic009G122500 Sobic009G122500 Sobic004G084500--Sobic009G122500 Sobic001G193100 Sobic001G193100 Sobic004G084500--Sobic001G193100 Sobic004G345400 Sobic004G345400 Sobic004G084500--Sobic004G345400 Sobic003G398400 Sobic003G398400 Sobic004G084500--Sobic003G398400 Sobic010G074900 Sobic010G074900 Sobic004G084500--Sobic010G074900 Sobic006G128100 Sobic006G128100 Sobic004G084500--Sobic006G128100 Sobic006G224300 Sobic006G224300 Sobic004G084500--Sobic006G224300 Sobic003G394200--Sobic004G084500 Sobic006G203300 Sobic006G203300 Sobic003G394200--Sobic006G203300 Sobic003G394200--Sobic006G128100 Sobic010G223400 Sobic010G223400 Sobic003G394200--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic003G394200--Sobic001G308400 Sobic009G049400 Sobic009G049400 Sobic003G394200--Sobic009G049400 Sobic003G270600 Sobic003G270600 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic001G369000 Sobic001G369000 Sobic003G394200--Sobic001G369000 Sobic007G118500 Sobic007G118500 Sobic004G060300--Sobic007G118500 Sobic004G060300--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic004G060300--Sobic003G394500 Sobic001G335000 Sobic001G335000 Sobic004G060300--Sobic001G335000 Sobic003G346400 Sobic003G346400 Sobic004G060300--Sobic003G346400 Sobic007G030100 Sobic007G030100 Sobic004G060300--Sobic007G030100 Sobic001G389200 Sobic001G389200 Sobic004G060300--Sobic001G389200 Sobic004G060300--Sobic004G084500 Sobic001G012900 Sobic001G012900 Sobic004G060300--Sobic001G012900 Sobic009G122500--Sobic001G335000 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic009G122500--Sobic004G122900 Sobic009G122500--Sobic010G223400 Sobic009G122500--Sobic001G308400 Sobic009G122500--Sobic003G394200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic001G193100--Sobic010G223400 Sobic001G193100--Sobic003G394200 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic001G193100--Sobic004G084500 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic001G193100--Sobic010G074900 Sobic001G042200 Sobic001G042200 Sobic004G345400--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic004G345400--Sobic010G077500 Sobic009G249700 Sobic009G249700 Sobic004G345400--Sobic009G249700 Sobic007G042900 Sobic007G042900 Sobic004G345400--Sobic007G042900 Sobic004G180900 Sobic004G180900 Sobic004G345400--Sobic004G180900 Sobic006G186400 Sobic006G186400 Sobic004G345400--Sobic006G186400 Sobic004G345400--Sobic004G084500 Sobic007G056500 Sobic007G056500 Sobic004G345400--Sobic007G056500 Sobic004G345400--Sobic003G394200 Sobic004G218300 Sobic004G218300 Sobic003G398400--Sobic004G218300 Sobic006G130200 Sobic006G130200 Sobic003G398400--Sobic006G130200 Sobic003G398400--Sobic004G084500 Sobic003G398400--Sobic003G394200 Sobic002G164300 Sobic002G164300 Sobic003G398400--Sobic002G164300 Sobic010G213500 Sobic010G213500 Sobic003G398400--Sobic010G213500 Sobic003G398400--Sobic010G074900 Sobic003G398400--Sobic004G122900 Sobic003G407100 Sobic003G407100 Sobic003G398400--Sobic003G407100 Sobic004G345700 Sobic004G345700 Sobic010G074900--Sobic004G345700 Sobic003G205501 Sobic003G205501 Sobic010G074900--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic010G074900--Sobic001G408700 Sobic010G074900--Sobic001G193100 Sobic010G074900--Sobic004G084500 Sobic006G091000 Sobic006G091000 Sobic010G074900--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic010G074900--Sobic005G040900 Sobic004G007300 Sobic004G007300 Sobic010G074900--Sobic004G007300 Sobic010G074900--Sobic003G398400 Sobic006G128100--Sobic003G394200 Sobic006G128100--Sobic001G308400 Sobic002G355800 Sobic002G355800 Sobic006G128100--Sobic002G355800 Sobic010G169900 Sobic010G169900 Sobic006G128100--Sobic010G169900 Sobic002G079000 Sobic002G079000 Sobic006G128100--Sobic002G079000 Sobic006G128100--Sobic010G213500 Sobic006G128100--Sobic003G189600 Sobic006G128100--Sobic003G346400 Sobic006G210700 Sobic006G210700 Sobic006G128100--Sobic006G210700 Sobic008G021000 Sobic008G021000 Sobic006G224300--Sobic008G021000 Sobic006G224300--Sobic004G084500 Sobic009G059400 Sobic009G059400 Sobic006G224300--Sobic009G059400 Sobic006G224300--Sobic004G345400 Sobic006G224300--Sobic003G394200 Sobic009G040800 Sobic009G040800 Sobic006G224300--Sobic009G040800 Sobic009G017200 Sobic009G017200 Sobic006G224300--Sobic009G017200 Sobic002G115500 Sobic002G115500 Sobic006G224300--Sobic002G115500 Sobic006G224300--Sobic006G203300
Octagon: transcription factors


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