Gene annotation
Transcriptome id Sobic.004G060300.1
Synonym Sb04g005050
Functional annotation DNA binding protein, putative, expressed
UniProt C5XW74
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G19160 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os02g07880.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a051726 , Zm00025a041983 , Zm00025a054931 , Zm00025a034767 , Zm00025a019138
Brachypodium KQK16968 , KQK16967 , KQK16966 , KQJ93594 , KQJ93595
Barley -
Wheat TraesCS7B02G392700 , TraesCS6A02G154200 , TraesCS6A02G154200 , TraesCS7A02G489600
Populus -


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cDNA sequences
Sobic.004G060300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
2 Sobic.009G122500 expressed protein -
3 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
4 Sobic.001G335000 erlin-2 precursor, putative, expressed -
5 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
6 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
7 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
8 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
9 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
10 Sobic.001G193100 expressed protein -
11 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
12 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
13 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
14 Sobic.001G490900 growth regulator related protein, putative, expressed -
15 Sobic.007G172700 ECT5, putative, expressed -
16 Sobic.006G128100 lipase, putative, expressed -
17 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
18 Sobic.010G223400 expressed protein -
19 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
20 Sobic.004G068100 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic004G060300 Sobic004G060300 Sobic007G118500 Sobic007G118500 Sobic004G060300--Sobic007G118500 Sobic009G122500 Sobic009G122500 Sobic004G060300--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic004G060300--Sobic003G394500 Sobic001G335000 Sobic001G335000 Sobic004G060300--Sobic001G335000 Sobic003G346400 Sobic003G346400 Sobic004G060300--Sobic003G346400 Sobic007G030100 Sobic007G030100 Sobic004G060300--Sobic007G030100 Sobic001G389200 Sobic001G389200 Sobic004G060300--Sobic001G389200 Sobic004G084500 Sobic004G084500 Sobic004G060300--Sobic004G084500 Sobic001G012900 Sobic001G012900 Sobic004G060300--Sobic001G012900 Sobic007G118500--Sobic003G394500 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic010G133400 Sobic010G133400 Sobic007G118500--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic007G118500--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic007G118500--Sobic006G232800 Sobic001G455000 Sobic001G455000 Sobic007G118500--Sobic001G455000 Sobic001G356100 Sobic001G356100 Sobic007G118500--Sobic001G356100 Sobic008G171400 Sobic008G171400 Sobic007G118500--Sobic008G171400 Sobic009G122500--Sobic001G335000 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic003G117800 Sobic003G117800 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic004G350700 Sobic004G350700 Sobic003G394500--Sobic004G350700 Sobic003G394500--Sobic001G378800 Sobic003G394500--Sobic007G118500 Sobic003G190200 Sobic003G190200 Sobic003G394500--Sobic003G190200 Sobic003G394500--Sobic006G232800 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800 Sobic001G335000--Sobic009G122500 Sobic001G335000--Sobic004G060300 Sobic001G335000--Sobic001G156900 Sobic001G335000--Sobic004G122900 Sobic001G335000--Sobic001G012900 Sobic001G043200 Sobic001G043200 Sobic001G335000--Sobic001G043200 Sobic001G193100 Sobic001G193100 Sobic001G335000--Sobic001G193100 Sobic003G181700 Sobic003G181700 Sobic001G335000--Sobic003G181700 Sobic001G335000--Sobic007G118500 Sobic004G254800 Sobic004G254800 Sobic003G346400--Sobic004G254800 Sobic006G021700 Sobic006G021700 Sobic003G346400--Sobic006G021700 Sobic003G346400--Sobic004G060300 Sobic003G346400--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic003G346400--Sobic006G203300 Sobic001G445500 Sobic001G445500 Sobic003G346400--Sobic001G445500 Sobic003G209200 Sobic003G209200 Sobic003G346400--Sobic003G209200 Sobic001G161700 Sobic001G161700 Sobic003G346400--Sobic001G161700 Sobic003G346400--Sobic001G012900 Sobic007G030100--Sobic003G190200 Sobic002G147200 Sobic002G147200 Sobic007G030100--Sobic002G147200 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic007G030100--Sobic001G385000 Sobic007G172700 Sobic007G172700 Sobic007G030100--Sobic007G172700 Sobic007G030100--Sobic001G424800 Sobic007G030100--Sobic006G232800 Sobic003G428000 Sobic003G428000 Sobic007G030100--Sobic003G428000 Sobic006G060000 Sobic006G060000 Sobic001G389200--Sobic006G060000 Sobic008G168200 Sobic008G168200 Sobic001G389200--Sobic008G168200 Sobic002G395500 Sobic002G395500 Sobic001G389200--Sobic002G395500 Sobic002G355800 Sobic002G355800 Sobic001G389200--Sobic002G355800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic001G389200--Sobic007G172700 Sobic010G169900 Sobic010G169900 Sobic001G389200--Sobic010G169900 Sobic001G389200--Sobic009G122500 Sobic004G084500--Sobic003G394200 Sobic004G084500--Sobic004G060300 Sobic004G084500--Sobic009G122500 Sobic004G084500--Sobic001G193100 Sobic004G345400 Sobic004G345400 Sobic004G084500--Sobic004G345400 Sobic003G398400 Sobic003G398400 Sobic004G084500--Sobic003G398400 Sobic010G074900 Sobic010G074900 Sobic004G084500--Sobic010G074900 Sobic006G128100 Sobic006G128100 Sobic004G084500--Sobic006G128100 Sobic006G224300 Sobic006G224300 Sobic004G084500--Sobic006G224300 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G012900--Sobic001G193100 Sobic005G059500 Sobic005G059500 Sobic001G012900--Sobic005G059500 Sobic001G012900--Sobic001G161700 Sobic001G012900--Sobic004G060300 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500
Octagon: transcription factors


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