Gene annotation
Transcriptome id Sobic.004G068100.2,Sobic.004G068100.1
Synonym Sb04g005696, TIP1
Functional annotation palmitoyltransferase TIP1, putative, expressed
UniProt C5XWX3 , A0A194YP69
Pfam PF13637 PF12796 PF01529
Panther DB PTHR24161 PTHR24161:SF22
NCBI CDD KOG0509; Ankyrin repeat and DHHC-type Zn-finger domain containing proteins
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT5G20350 : Ankyrin repeat family protein with DHHC zinc finger domain
RAP-DB (Rice) LOC_Os02g09130.1 : palmitoyltransferase TIP1, putative, expressed
MaizeGDB (Corn) Zm00025a051391 , Zm00025a042067 , Zm00025a019291 , Zm00025a019284
Brachypodium KQK16781 , KQK16783 , KQK16782 , KQJ93703 , KQJ93702 , KQJ93704
Barley HORVU7Hr1G115550.4 , HORVU7Hr1G115550.5 , HORVU7Hr1G115550.2 , HORVU7Hr1G115550.3 , HORVU7Hr1G115550.1 , HORVU0Hr1G015770.6 , HORVU0Hr1G015770.7 , HORVU0Hr1G015770.4 , HORVU0Hr1G015770.5 , HORVU0Hr1G015770.2 , HORVU0Hr1G015770.3 , HORVU0Hr1G015770.1 , HORVU0Hr1G015770.8 , HORVU0Hr1G015770.9 , HORVU0Hr1G015770.10 , HORVU0Hr1G015770.11 , HORVU0Hr1G015770.12 , HORVU0Hr1G015770.13
Wheat TraesCS6D02G133900 , TraesCS6D02G133900 , TraesCS6B02G173100 , TraesCS6B02G173100 , TraesCS7D02G507500 , TraesCS7D02G507500 , TraesCS6A02G144900 , TraesCS6A02G144900 , TraesCS7A02G517600 , TraesCS7B02G433700 , TraesCS7B02G433700 , TraesCS6B02G173100
Populus -


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cDNA sequences
Sobic.004G068100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
2 Sobic.001G490900 growth regulator related protein, putative, expressed -
3 Sobic.004G060300 DNA binding protein, putative, expressed -
4 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
5 Sobic.009G156100 - -
6 Sobic.003G398400 expressed protein -
7 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
8 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
9 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
10 Sobic.001G179200 expressed protein -
11 Sobic.009G122500 expressed protein -
12 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
13 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
14 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
15 Sobic.003G405600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
16 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
17 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
18 Sobic.010G112600 integral membrane protein, putative, expressed -
19 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
20 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42


Gene co-expression network
sample Sobic004G068100 Sobic004G068100 Sobic001G114200 Sobic001G114200 Sobic004G068100--Sobic001G114200 Sobic001G490900 Sobic001G490900 Sobic004G068100--Sobic001G490900 Sobic004G060300 Sobic004G060300 Sobic004G068100--Sobic004G060300 Sobic007G030100 Sobic007G030100 Sobic004G068100--Sobic007G030100 Sobic009G156100 Sobic009G156100 Sobic004G068100--Sobic009G156100 Sobic003G398400 Sobic003G398400 Sobic004G068100--Sobic003G398400 Sobic006G060000 Sobic006G060000 Sobic004G068100--Sobic006G060000 Sobic004G345400 Sobic004G345400 Sobic004G068100--Sobic004G345400 Sobic003G181700 Sobic003G181700 Sobic004G068100--Sobic003G181700 Sobic004G350700 Sobic004G350700 Sobic001G114200--Sobic004G350700 Sobic001G114200--Sobic006G060000 Sobic010G160300 Sobic010G160300 Sobic001G114200--Sobic010G160300 Sobic003G117800 Sobic003G117800 Sobic001G114200--Sobic003G117800 Sobic003G394500 Sobic003G394500 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G114200--Sobic001G490900 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic009G194000 Sobic009G194000 Sobic001G490900--Sobic009G194000 Sobic001G490900--Sobic006G060000 Sobic001G490900--Sobic001G114200 Sobic010G169900 Sobic010G169900 Sobic001G490900--Sobic010G169900 Sobic001G490900--Sobic003G181700 Sobic002G079000 Sobic002G079000 Sobic001G490900--Sobic002G079000 Sobic009G122500 Sobic009G122500 Sobic001G490900--Sobic009G122500 Sobic007G172700 Sobic007G172700 Sobic001G490900--Sobic007G172700 Sobic001G141400 Sobic001G141400 Sobic001G490900--Sobic001G141400 Sobic007G118500 Sobic007G118500 Sobic004G060300--Sobic007G118500 Sobic004G060300--Sobic009G122500 Sobic004G060300--Sobic003G394500 Sobic001G335000 Sobic001G335000 Sobic004G060300--Sobic001G335000 Sobic003G346400 Sobic003G346400 Sobic004G060300--Sobic003G346400 Sobic004G060300--Sobic007G030100 Sobic001G389200 Sobic001G389200 Sobic004G060300--Sobic001G389200 Sobic004G084500 Sobic004G084500 Sobic004G060300--Sobic004G084500 Sobic001G012900 Sobic001G012900 Sobic004G060300--Sobic001G012900 Sobic003G190200 Sobic003G190200 Sobic007G030100--Sobic003G190200 Sobic002G147200 Sobic002G147200 Sobic007G030100--Sobic002G147200 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic007G030100--Sobic001G385000 Sobic007G030100--Sobic007G172700 Sobic001G424800 Sobic001G424800 Sobic007G030100--Sobic001G424800 Sobic006G232800 Sobic006G232800 Sobic007G030100--Sobic006G232800 Sobic003G428000 Sobic003G428000 Sobic007G030100--Sobic003G428000 Sobic003G377500 Sobic003G377500 Sobic009G156100--Sobic003G377500 Sobic009G156100--Sobic004G068100 Sobic009G156100--Sobic001G114200 Sobic008G116700 Sobic008G116700 Sobic009G156100--Sobic008G116700 Sobic009G156100--Sobic006G060000 Sobic007G076400 Sobic007G076400 Sobic009G156100--Sobic007G076400 Sobic009G156100--Sobic003G181700 Sobic006G005200 Sobic006G005200 Sobic009G156100--Sobic006G005200 Sobic002G200000 Sobic002G200000 Sobic009G156100--Sobic002G200000 Sobic004G218300 Sobic004G218300 Sobic003G398400--Sobic004G218300 Sobic006G130200 Sobic006G130200 Sobic003G398400--Sobic006G130200 Sobic003G398400--Sobic004G084500 Sobic003G394200 Sobic003G394200 Sobic003G398400--Sobic003G394200 Sobic002G164300 Sobic002G164300 Sobic003G398400--Sobic002G164300 Sobic010G213500 Sobic010G213500 Sobic003G398400--Sobic010G213500 Sobic010G074900 Sobic010G074900 Sobic003G398400--Sobic010G074900 Sobic004G122900 Sobic004G122900 Sobic003G398400--Sobic004G122900 Sobic003G407100 Sobic003G407100 Sobic003G398400--Sobic003G407100 Sobic008G055500 Sobic008G055500 Sobic006G060000--Sobic008G055500 Sobic006G060000--Sobic004G350700 Sobic006G060000--Sobic007G172700 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic006G060000--Sobic001G389200 Sobic004G263500 Sobic004G263500 Sobic006G060000--Sobic004G263500 Sobic006G060000--Sobic003G117800 Sobic006G060000--Sobic001G490900 Sobic001G042200 Sobic001G042200 Sobic004G345400--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic004G345400--Sobic010G077500 Sobic009G249700 Sobic009G249700 Sobic004G345400--Sobic009G249700 Sobic007G042900 Sobic007G042900 Sobic004G345400--Sobic007G042900 Sobic004G180900 Sobic004G180900 Sobic004G345400--Sobic004G180900 Sobic006G186400 Sobic006G186400 Sobic004G345400--Sobic006G186400 Sobic004G345400--Sobic004G084500 Sobic007G056500 Sobic007G056500 Sobic004G345400--Sobic007G056500 Sobic004G345400--Sobic003G394200 Sobic003G181700--Sobic009G194000 Sobic003G021600 Sobic003G021600 Sobic003G181700--Sobic003G021600 Sobic003G181700--Sobic004G122900 Sobic003G181700--Sobic001G490900 Sobic003G181700--Sobic010G169900 Sobic002G227500 Sobic002G227500 Sobic003G181700--Sobic002G227500 Sobic003G181700--Sobic006G060000 Sobic003G181700--Sobic009G122500 Sobic003G181700--Sobic007G172700
Octagon: transcription factors


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