Gene annotation
Transcriptome id Sobic.007G077532.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8L2
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF40
NCBI CDD KOG3246; Sentrin-specific cysteine protease (Ulp1 family)
KEGG Orthology K08597; SENP8, NEDP1, sentrin-specific protease 8
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G60190 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os12g01180.1 : WRKY57, expressed
MaizeGDB (Corn) Zm00025a054885
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G141400 START domain containing protein, putative, expressed -
2 Sobic.001G057400 expressed protein -
3 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
4 Sobic.004G004100 nucleic acid binding protein, putative, expressed -
5 Sobic.005G185500 - -
6 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
7 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
8 Sobic.008G006000 expressed protein -
9 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
11 Sobic.005G170000 expressed protein -
12 Sobic.008G036600 expressed protein -
13 Sobic.003G005100 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
14 Sobic.003G405600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
15 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
16 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.004G016100 expressed protein -
18 Sobic.001G504500 expressed protein -
19 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
20 Sobic.001G424800 myosin heavy chain-related, putative, expressed -


Gene co-expression network
sample Sobic007G077532 Sobic007G077532 Sobic004G141400 Sobic004G141400 Sobic007G077532--Sobic004G141400 Sobic001G057400 Sobic001G057400 Sobic007G077532--Sobic001G057400 Sobic007G192400 Sobic007G192400 Sobic007G077532--Sobic007G192400 Sobic004G004100 Sobic004G004100 Sobic007G077532--Sobic004G004100 Sobic005G185500 Sobic005G185500 Sobic007G077532--Sobic005G185500 Sobic010G181600 Sobic010G181600 Sobic007G077532--Sobic010G181600 Sobic003G353700 Sobic003G353700 Sobic007G077532--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic007G077532--Sobic008G006000 Sobic003G117800 Sobic003G117800 Sobic007G077532--Sobic003G117800 Sobic004G141400--Sobic007G077532 Sobic004G141400--Sobic008G006000 Sobic004G141400--Sobic010G181600 Sobic004G259300 Sobic004G259300 Sobic004G141400--Sobic004G259300 Sobic004G141400--Sobic007G192400 Sobic001G356200 Sobic001G356200 Sobic004G141400--Sobic001G356200 Sobic004G141400--Sobic004G004100 Sobic004G141400--Sobic003G117800 Sobic004G141400--Sobic003G353700 Sobic001G057400--Sobic003G117800 Sobic001G057400--Sobic007G077532 Sobic001G057400--Sobic005G185500 Sobic001G057400--Sobic003G353700 Sobic003G428000 Sobic003G428000 Sobic001G057400--Sobic003G428000 Sobic010G255900 Sobic010G255900 Sobic001G057400--Sobic010G255900 Sobic007G142600 Sobic007G142600 Sobic001G057400--Sobic007G142600 Sobic003G385300 Sobic003G385300 Sobic001G057400--Sobic003G385300 Sobic008G055500 Sobic008G055500 Sobic001G057400--Sobic008G055500 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G192400--Sobic007G077532 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic007G192400--Sobic004G141400 Sobic004G004100--Sobic010G181600 Sobic004G004100--Sobic007G077532 Sobic004G004100--Sobic001G356200 Sobic008G152700 Sobic008G152700 Sobic004G004100--Sobic008G152700 Sobic004G004100--Sobic003G428000 Sobic009G046900 Sobic009G046900 Sobic004G004100--Sobic009G046900 Sobic003G058500 Sobic003G058500 Sobic004G004100--Sobic003G058500 Sobic004G004100--Sobic003G117800 Sobic001G149000 Sobic001G149000 Sobic004G004100--Sobic001G149000 Sobic002G389600 Sobic002G389600 Sobic005G185500--Sobic002G389600 Sobic005G185500--Sobic003G385300 Sobic006G093600 Sobic006G093600 Sobic005G185500--Sobic006G093600 Sobic007G039200 Sobic007G039200 Sobic005G185500--Sobic007G039200 Sobic006G001100 Sobic006G001100 Sobic005G185500--Sobic006G001100 Sobic005G225500 Sobic005G225500 Sobic005G185500--Sobic005G225500 Sobic002G102300 Sobic002G102300 Sobic005G185500--Sobic002G102300 Sobic006G162500 Sobic006G162500 Sobic005G185500--Sobic006G162500 Sobic003G402800 Sobic003G402800 Sobic005G185500--Sobic003G402800 Sobic010G181600--Sobic003G058500 Sobic001G424800 Sobic001G424800 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic010G181600--Sobic008G006000 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400 Sobic003G353700--Sobic007G192400 Sobic003G353700--Sobic008G036600 Sobic005G063200 Sobic005G063200 Sobic003G353700--Sobic005G063200 Sobic001G024400 Sobic001G024400 Sobic003G353700--Sobic001G024400 Sobic003G353700--Sobic007G039200 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic003G353700--Sobic008G006000 Sobic008G006000--Sobic010G181600 Sobic008G006000--Sobic007G192400 Sobic008G006000--Sobic003G353700 Sobic008G006000--Sobic004G141400 Sobic008G006000--Sobic007G077532 Sobic008G006000--Sobic010G255900 Sobic008G006000--Sobic005G185500 Sobic008G006000--Sobic003G117800 Sobic001G280500 Sobic001G280500 Sobic008G006000--Sobic001G280500 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic003G117800--Sobic009G046900
Octagon: transcription factors


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