Gene annotation
Transcriptome id Sobic.003G405600.2,Sobic.003G405600.1
Synonym Sb03g044100
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
exostosin family domain containing protein, expressed
UniProt C5XGB3 , A0A1W0W186
Pfam PF03016
Panther DB PTHR11062 PTHR11062:SF48
NCBI CDD KOG1021; Acetylglucosaminyltransferase EXT1/exostosin 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67410 : Exostosin family protein
RAP-DB (Rice) LOC_Os01g69220.1 : exostosin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026254
Brachypodium KQK11258
Barley HORVU1Hr1G016110.10 , HORVU1Hr1G016110.6 , HORVU1Hr1G016110.7 , HORVU1Hr1G016110.4 , HORVU1Hr1G016110.5 , HORVU1Hr1G016110.2 , HORVU1Hr1G016110.3 , HORVU1Hr1G016110.1 , HORVU4Hr1G053860.12 , HORVU4Hr1G053860.13 , HORVU4Hr1G053860.10 , HORVU4Hr1G053860.11 , HORVU4Hr1G053860.8 , HORVU4Hr1G053860.9 , HORVU4Hr1G053860.1 , HORVU4Hr1G053860.2 , HORVU4Hr1G053860.3 , HORVU4Hr1G053860.4 , HORVU4Hr1G053860.5 , HORVU4Hr1G053860.7 , HORVU3Hr1G094440.1 , HORVU3Hr1G094440.2 , HORVU3Hr1G094440.3 , HORVU3Hr1G094440.4 , HORVU3Hr1G094440.5 , HORVU5Hr1G043790.10 , HORVU5Hr1G043790.11 , HORVU5Hr1G043790.7 , HORVU5Hr1G043790.4 , HORVU5Hr1G043790.5 , HORVU5Hr1G043790.2 , HORVU5Hr1G043790.3 , HORVU5Hr1G043790.1 , HORVU5Hr1G043790.8 , HORVU5Hr1G043790.9 , HORVU5Hr1G043790.12 , HORVU5Hr1G043790.14
Wheat TraesCS3D02G424500 , TraesCS3A02G428900 , TraesCS3D02G424500 , TraesCS3B02G466500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
3 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
4 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
5 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
6 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
7 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
8 Sobic.007G172700 ECT5, putative, expressed -
9 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
10 Sobic.004G350700 kelch repeat protein, putative, expressed -
11 Sobic.004G302800 MSP domain containing protein, expressed -
12 Sobic.004G141400 START domain containing protein, putative, expressed -
13 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
14 Sobic.004G068100 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
15 Sobic.001G490900 growth regulator related protein, putative, expressed -
16 Sobic.005G185500 - -
17 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
18 Sobic.001G057400 expressed protein -
19 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.002G079000 expressed protein -


Gene co-expression network
sample Sobic003G405600 Sobic003G405600 Sobic003G117800 Sobic003G117800 Sobic003G405600--Sobic003G117800 Sobic007G077532 Sobic007G077532 Sobic003G405600--Sobic007G077532 Sobic001G257800 Sobic001G257800 Sobic003G405600--Sobic001G257800 Sobic001G114200 Sobic001G114200 Sobic003G405600--Sobic001G114200 Sobic006G060000 Sobic006G060000 Sobic003G405600--Sobic006G060000 Sobic007G030100 Sobic007G030100 Sobic003G405600--Sobic007G030100 Sobic010G213500 Sobic010G213500 Sobic003G405600--Sobic010G213500 Sobic007G172700 Sobic007G172700 Sobic003G405600--Sobic007G172700 Sobic008G055500 Sobic008G055500 Sobic003G405600--Sobic008G055500 Sobic001G424800 Sobic001G424800 Sobic003G117800--Sobic001G424800 Sobic003G385300 Sobic003G385300 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic008G152700 Sobic008G152700 Sobic003G117800--Sobic008G152700 Sobic001G149000 Sobic001G149000 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic004G141400 Sobic004G141400 Sobic007G077532--Sobic004G141400 Sobic007G077532--Sobic001G057400 Sobic007G192400 Sobic007G192400 Sobic007G077532--Sobic007G192400 Sobic004G004100 Sobic004G004100 Sobic007G077532--Sobic004G004100 Sobic005G185500 Sobic005G185500 Sobic007G077532--Sobic005G185500 Sobic010G181600 Sobic010G181600 Sobic007G077532--Sobic010G181600 Sobic003G353700 Sobic003G353700 Sobic007G077532--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic007G077532--Sobic008G006000 Sobic007G077532--Sobic003G117800 Sobic003G402800 Sobic003G402800 Sobic001G257800--Sobic003G402800 Sobic001G257800--Sobic003G385300 Sobic010G134650 Sobic010G134650 Sobic001G257800--Sobic010G134650 Sobic004G064200 Sobic004G064200 Sobic001G257800--Sobic004G064200 Sobic010G024400 Sobic010G024400 Sobic001G257800--Sobic010G024400 Sobic004G176200 Sobic004G176200 Sobic001G257800--Sobic004G176200 Sobic002G074800 Sobic002G074800 Sobic001G257800--Sobic002G074800 Sobic004G261700 Sobic004G261700 Sobic001G257800--Sobic004G261700 Sobic001G257800--Sobic008G152700 Sobic004G350700 Sobic004G350700 Sobic001G114200--Sobic004G350700 Sobic001G114200--Sobic006G060000 Sobic010G160300 Sobic010G160300 Sobic001G114200--Sobic010G160300 Sobic001G114200--Sobic003G117800 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G490900 Sobic001G490900 Sobic001G114200--Sobic001G490900 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic006G060000--Sobic008G055500 Sobic006G060000--Sobic004G350700 Sobic006G060000--Sobic007G172700 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic001G389200 Sobic001G389200 Sobic006G060000--Sobic001G389200 Sobic004G263500 Sobic004G263500 Sobic006G060000--Sobic004G263500 Sobic006G060000--Sobic003G117800 Sobic006G060000--Sobic001G490900 Sobic003G190200 Sobic003G190200 Sobic007G030100--Sobic003G190200 Sobic002G147200 Sobic002G147200 Sobic007G030100--Sobic002G147200 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic007G030100--Sobic001G385000 Sobic007G030100--Sobic007G172700 Sobic007G030100--Sobic001G424800 Sobic006G232800 Sobic006G232800 Sobic007G030100--Sobic006G232800 Sobic003G428000 Sobic003G428000 Sobic007G030100--Sobic003G428000 Sobic002G079000 Sobic002G079000 Sobic010G213500--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic010G213500--Sobic002G355800 Sobic006G128100 Sobic006G128100 Sobic010G213500--Sobic006G128100 Sobic002G306100 Sobic002G306100 Sobic010G213500--Sobic002G306100 Sobic010G169900 Sobic010G169900 Sobic010G213500--Sobic010G169900 Sobic010G213500--Sobic001G490900 Sobic010G213500--Sobic007G172700 Sobic003G398400 Sobic003G398400 Sobic010G213500--Sobic003G398400 Sobic007G125000 Sobic007G125000 Sobic010G213500--Sobic007G125000 Sobic007G172700--Sobic006G060000 Sobic007G172700--Sobic004G350700 Sobic007G172700--Sobic008G152700 Sobic007G172700--Sobic003G190200 Sobic007G172700--Sobic003G394500 Sobic003G058500 Sobic003G058500 Sobic007G172700--Sobic003G058500 Sobic007G172700--Sobic002G355800 Sobic007G172700--Sobic001G424800 Sobic007G172700--Sobic007G030100 Sobic008G055500--Sobic003G402800 Sobic008G055500--Sobic006G060000 Sobic008G055500--Sobic004G350700 Sobic008G055500--Sobic003G385300 Sobic008G055500--Sobic003G117800 Sobic008G055500--Sobic001G257800 Sobic008G055500--Sobic008G152700 Sobic008G055500--Sobic004G176200 Sobic001G501900 Sobic001G501900 Sobic008G055500--Sobic001G501900
Octagon: transcription factors


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