Gene annotation
Transcriptome id Sobic.003G394500.1
Synonym Sb03g043190
Functional annotation GPI transamidase component PIG-S-related, putative, expressed
UniProt C5XFI1
Pfam PF10510
Panther DB PTHR21072
NCBI CDD KOG2459; GPI transamidase complex, GPI17/PIG-S component, involved in glycosylphosphatidylinositol anchor biosynthesis
KEGG Orthology K05291; GPI-anchor transamidase subunit S
Gene Ontology GO:0016255; attachment of GPI anchor to protein


Orthologs (automatic annotation)
TAIR AT3G07180 : GPI transamidase component PIG-S-related
RAP-DB (Rice) LOC_Os01g67960.1 : GPI transamidase component PIG-S-related, putative, expressed
MaizeGDB (Corn) Zm00025a039411 , Zm00025a026365
Brachypodium KQK11107
Barley HORVU3Hr1G091850.8 , HORVU3Hr1G091850.1 , HORVU3Hr1G091850.2 , HORVU3Hr1G091850.3 , HORVU3Hr1G091850.5 , HORVU3Hr1G091850.9 , HORVU3Hr1G091850.15 , HORVU3Hr1G091850.13 , HORVU3Hr1G091850.10 , HORVU3Hr1G091850.11 , HORVU3Hr1G091850.14
Wheat TraesCS3A02G412600 , TraesCS7B02G362800 , TraesCS7B02G362800 , TraesCS3A02G412600 , TraesCS3A02G412600 , TraesCS3D02G407300 , TraesCS3D02G407300 , TraesCS3B02G447000 , TraesCS3D02G407300
Populus -


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cDNA sequences
Sobic.003G394500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
3 Sobic.004G350700 kelch repeat protein, putative, expressed -
4 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
5 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
6 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
7 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
8 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
9 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
10 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
11 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
12 Sobic.007G172700 ECT5, putative, expressed -
13 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
14 Sobic.001G149000 FAR1 family protein, expressed -
15 Sobic.004G060300 DNA binding protein, putative, expressed -
16 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
17 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
18 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
19 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
20 Sobic.001G486900 exostosin family protein, putative, expressed -


Gene co-expression network
sample Sobic003G394500 Sobic003G394500 Sobic003G117800 Sobic003G117800 Sobic003G394500--Sobic003G117800 Sobic001G385000 Sobic001G385000 Sobic003G394500--Sobic001G385000 Sobic004G350700 Sobic004G350700 Sobic003G394500--Sobic004G350700 Sobic001G378800 Sobic001G378800 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G190200 Sobic003G190200 Sobic003G394500--Sobic003G190200 Sobic006G232800 Sobic006G232800 Sobic003G394500--Sobic006G232800 Sobic007G030100 Sobic007G030100 Sobic003G394500--Sobic007G030100 Sobic001G424800 Sobic001G424800 Sobic003G394500--Sobic001G424800 Sobic003G117800--Sobic001G424800 Sobic003G385300 Sobic003G385300 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic008G152700 Sobic008G152700 Sobic003G117800--Sobic008G152700 Sobic001G149000 Sobic001G149000 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic010G086300 Sobic010G086300 Sobic001G385000--Sobic010G086300 Sobic001G385000--Sobic003G394500 Sobic001G385000--Sobic006G232800 Sobic001G385000--Sobic001G149000 Sobic001G385000--Sobic003G117800 Sobic001G385000--Sobic001G356200 Sobic001G385000--Sobic008G152700 Sobic001G385000--Sobic001G424800 Sobic001G308500 Sobic001G308500 Sobic001G385000--Sobic001G308500 Sobic008G055500 Sobic008G055500 Sobic004G350700--Sobic008G055500 Sobic004G350700--Sobic003G394500 Sobic004G350700--Sobic003G385300 Sobic004G350700--Sobic001G424800 Sobic006G060000 Sobic006G060000 Sobic004G350700--Sobic006G060000 Sobic004G350700--Sobic001G149000 Sobic007G172700 Sobic007G172700 Sobic004G350700--Sobic007G172700 Sobic001G114200 Sobic001G114200 Sobic004G350700--Sobic001G114200 Sobic004G350700--Sobic003G117800 Sobic001G378800--Sobic006G232800 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G378800--Sobic001G424800 Sobic003G260600 Sobic003G260600 Sobic001G378800--Sobic003G260600 Sobic001G378800--Sobic004G350700 Sobic007G118500--Sobic003G394500 Sobic004G060300 Sobic004G060300 Sobic007G118500--Sobic004G060300 Sobic002G070300 Sobic002G070300 Sobic007G118500--Sobic002G070300 Sobic010G133400 Sobic010G133400 Sobic007G118500--Sobic010G133400 Sobic007G118500--Sobic001G378800 Sobic007G118500--Sobic006G232800 Sobic001G455000 Sobic001G455000 Sobic007G118500--Sobic001G455000 Sobic001G356100 Sobic001G356100 Sobic007G118500--Sobic001G356100 Sobic008G171400 Sobic008G171400 Sobic007G118500--Sobic008G171400 Sobic003G190200--Sobic007G030100 Sobic003G190200--Sobic003G394500 Sobic003G190200--Sobic007G172700 Sobic003G021600 Sobic003G021600 Sobic003G190200--Sobic003G021600 Sobic009G252300 Sobic009G252300 Sobic003G190200--Sobic009G252300 Sobic003G190200--Sobic001G424800 Sobic003G393200 Sobic003G393200 Sobic003G190200--Sobic003G393200 Sobic003G428000 Sobic003G428000 Sobic003G190200--Sobic003G428000 Sobic003G190200--Sobic001G385000 Sobic006G232800--Sobic001G378800 Sobic006G232800--Sobic001G385000 Sobic006G232800--Sobic003G394500 Sobic006G232800--Sobic001G149000 Sobic006G232800--Sobic010G086300 Sobic001G280500 Sobic001G280500 Sobic006G232800--Sobic001G280500 Sobic002G313100 Sobic002G313100 Sobic006G232800--Sobic002G313100 Sobic002G392400 Sobic002G392400 Sobic006G232800--Sobic002G392400 Sobic006G265800 Sobic006G265800 Sobic006G232800--Sobic006G265800 Sobic007G030100--Sobic003G190200 Sobic002G147200 Sobic002G147200 Sobic007G030100--Sobic002G147200 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic007G030100--Sobic001G385000 Sobic007G030100--Sobic007G172700 Sobic007G030100--Sobic001G424800 Sobic007G030100--Sobic006G232800 Sobic007G030100--Sobic003G428000 Sobic001G424800--Sobic003G117800 Sobic003G058500 Sobic003G058500 Sobic001G424800--Sobic003G058500 Sobic001G424800--Sobic004G350700 Sobic001G424800--Sobic001G356200 Sobic001G424800--Sobic001G149000 Sobic001G424800--Sobic001G280500 Sobic001G424800--Sobic003G394500 Sobic001G424800--Sobic003G385300 Sobic001G424800--Sobic001G378800
Octagon: transcription factors


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