Gene annotation
Transcriptome id Sobic.001G114200.1,Sobic.001G114200.2
Synonym Sb01g010136
Functional annotation transmembrane anterior posterior transformation 1, putative, expressed
UniProt A0A1Z5S588 , C5WN07
Pfam PF05346
Panther DB PTHR13317 PTHR13317:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67960 : -
RAP-DB (Rice) LOC_Os03g50730.1 : transmembrane anterior posterior transformation 1, putative, expressed
MaizeGDB (Corn) Zm00025a016958
Brachypodium KQK13524
Barley HORVU4Hr1G008130.21 , HORVU4Hr1G008130.20 , HORVU4Hr1G008130.23 , HORVU4Hr1G008130.22 , HORVU4Hr1G008130.25 , HORVU4Hr1G008130.24 , HORVU4Hr1G008130.27 , HORVU4Hr1G008130.26 , HORVU4Hr1G008130.8 , HORVU4Hr1G008130.9 , HORVU4Hr1G008130.6 , HORVU4Hr1G008130.7 , HORVU4Hr1G008130.4 , HORVU4Hr1G008130.5 , HORVU4Hr1G008130.2 , HORVU4Hr1G008130.3 , HORVU4Hr1G008130.1 , HORVU4Hr1G008130.14 , HORVU4Hr1G008130.15 , HORVU4Hr1G008130.16 , HORVU4Hr1G008130.17 , HORVU4Hr1G008130.10 , HORVU4Hr1G008130.11 , HORVU4Hr1G008130.12 , HORVU4Hr1G008130.13 , HORVU4Hr1G008130.18 , HORVU4Hr1G008130.19
Wheat TraesCS4A02G265400 , TraesCS4A02G265400 , TraesCS4D02G049700 , TraesCS4B02G049400 , TraesCS4B02G049400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G350700 kelch repeat protein, putative, expressed -
2 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
3 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
4 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
5 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
6 Sobic.006G210700 potassium transporter, putative, expressed -
7 Sobic.001G490900 growth regulator related protein, putative, expressed -
8 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
9 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
10 Sobic.007G172700 ECT5, putative, expressed -
11 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
12 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
13 Sobic.001G501900 appr-1-p processing enzyme family protein, putative, expressed -
14 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
15 Sobic.009G186700 TraB family protein, putative, expressed -
16 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
17 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
18 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
19 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
20 Sobic.004G068100 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic001G114200 Sobic001G114200 Sobic004G350700 Sobic004G350700 Sobic001G114200--Sobic004G350700 Sobic006G060000 Sobic006G060000 Sobic001G114200--Sobic006G060000 Sobic010G160300 Sobic010G160300 Sobic001G114200--Sobic010G160300 Sobic003G117800 Sobic003G117800 Sobic001G114200--Sobic003G117800 Sobic003G394500 Sobic003G394500 Sobic001G114200--Sobic003G394500 Sobic006G210700 Sobic006G210700 Sobic001G114200--Sobic006G210700 Sobic001G490900 Sobic001G490900 Sobic001G114200--Sobic001G490900 Sobic007G030100 Sobic007G030100 Sobic001G114200--Sobic007G030100 Sobic007G218600 Sobic007G218600 Sobic001G114200--Sobic007G218600 Sobic008G055500 Sobic008G055500 Sobic004G350700--Sobic008G055500 Sobic004G350700--Sobic003G394500 Sobic003G385300 Sobic003G385300 Sobic004G350700--Sobic003G385300 Sobic001G424800 Sobic001G424800 Sobic004G350700--Sobic001G424800 Sobic004G350700--Sobic006G060000 Sobic001G149000 Sobic001G149000 Sobic004G350700--Sobic001G149000 Sobic007G172700 Sobic007G172700 Sobic004G350700--Sobic007G172700 Sobic004G350700--Sobic001G114200 Sobic004G350700--Sobic003G117800 Sobic006G060000--Sobic008G055500 Sobic006G060000--Sobic004G350700 Sobic006G060000--Sobic007G172700 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic001G389200 Sobic001G389200 Sobic006G060000--Sobic001G389200 Sobic004G263500 Sobic004G263500 Sobic006G060000--Sobic004G263500 Sobic006G060000--Sobic003G117800 Sobic006G060000--Sobic001G490900 Sobic002G304700 Sobic002G304700 Sobic010G160300--Sobic002G304700 Sobic001G280500 Sobic001G280500 Sobic010G160300--Sobic001G280500 Sobic005G063200 Sobic005G063200 Sobic010G160300--Sobic005G063200 Sobic010G160300--Sobic001G114200 Sobic001G501900 Sobic001G501900 Sobic010G160300--Sobic001G501900 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic010G160300--Sobic003G117800 Sobic010G160300--Sobic001G149000 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic008G152700 Sobic008G152700 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic003G394500--Sobic003G117800 Sobic003G394500--Sobic001G385000 Sobic003G394500--Sobic004G350700 Sobic001G378800 Sobic001G378800 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G190200 Sobic003G190200 Sobic003G394500--Sobic003G190200 Sobic006G232800 Sobic006G232800 Sobic003G394500--Sobic006G232800 Sobic003G394500--Sobic007G030100 Sobic003G394500--Sobic001G424800 Sobic006G210700--Sobic001G114200 Sobic009G166600 Sobic009G166600 Sobic006G210700--Sobic009G166600 Sobic006G128100 Sobic006G128100 Sobic006G210700--Sobic006G128100 Sobic009G186700 Sobic009G186700 Sobic006G210700--Sobic009G186700 Sobic010G169900 Sobic010G169900 Sobic006G210700--Sobic010G169900 Sobic002G313900 Sobic002G313900 Sobic006G210700--Sobic002G313900 Sobic007G148400 Sobic007G148400 Sobic006G210700--Sobic007G148400 Sobic002G076500 Sobic002G076500 Sobic006G210700--Sobic002G076500 Sobic006G210700--Sobic001G490900 Sobic009G194000 Sobic009G194000 Sobic001G490900--Sobic009G194000 Sobic001G490900--Sobic006G060000 Sobic001G490900--Sobic001G114200 Sobic001G490900--Sobic010G169900 Sobic003G181700 Sobic003G181700 Sobic001G490900--Sobic003G181700 Sobic002G079000 Sobic002G079000 Sobic001G490900--Sobic002G079000 Sobic009G122500 Sobic009G122500 Sobic001G490900--Sobic009G122500 Sobic001G490900--Sobic007G172700 Sobic001G141400 Sobic001G141400 Sobic001G490900--Sobic001G141400 Sobic007G030100--Sobic003G190200 Sobic002G147200 Sobic002G147200 Sobic007G030100--Sobic002G147200 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic007G030100--Sobic001G385000 Sobic007G030100--Sobic007G172700 Sobic007G030100--Sobic001G424800 Sobic007G030100--Sobic006G232800 Sobic003G428000 Sobic003G428000 Sobic007G030100--Sobic003G428000 Sobic007G218600--Sobic009G186700 Sobic001G305900 Sobic001G305900 Sobic007G218600--Sobic001G305900 Sobic007G218600--Sobic007G148400 Sobic003G255700 Sobic003G255700 Sobic007G218600--Sobic003G255700 Sobic007G218600--Sobic001G280500 Sobic003G308300 Sobic003G308300 Sobic007G218600--Sobic003G308300 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic007G218600--Sobic010G160300
Octagon: transcription factors


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