Gene annotation
Transcriptome id Sobic.010G169900.2,Sobic.010G169900.1
Synonym Sb10g022260, ATBBETA
Functional annotation serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed
UniProt A0A194YJP7 , A0A194YJQ6
Pfam -
Panther DB PTHR11871 PTHR11871:SF11
NCBI CDD -
KEGG Orthology K04354; serine/threonine-protein phosphatase 2A regulatory subunit B
Gene Ontology GO:0000159; protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT1G17720 : Protein phosphatase 2A, regulatory subunit PR55
RAP-DB (Rice) LOC_Os06g36770.2 : serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed
MaizeGDB (Corn) Zm00025a051002 , Zm00025a034544
Brachypodium KQK17955 , KQK17954 , KQJ94089 , KQJ94088
Barley HORVU6Hr1G039910.21 , HORVU6Hr1G039910.20 , HORVU6Hr1G039910.22 , HORVU7Hr1G087940.5 , HORVU7Hr1G087940.4 , HORVU7Hr1G087940.7 , HORVU7Hr1G087940.6 , HORVU7Hr1G087940.1 , HORVU7Hr1G087940.3 , HORVU7Hr1G087940.2 , HORVU6Hr1G039910.2 , HORVU6Hr1G039910.3 , HORVU6Hr1G039910.1 , HORVU6Hr1G039910.6 , HORVU6Hr1G039910.7 , HORVU6Hr1G039910.4 , HORVU6Hr1G039910.5 , HORVU6Hr1G039910.8 , HORVU6Hr1G039910.9 , HORVU7Hr1G087940.11 , HORVU7Hr1G087940.10 , HORVU7Hr1G087940.12 , HORVU7Hr1G087940.9 , HORVU7Hr1G087940.8 , HORVU6Hr1G039910.14 , HORVU6Hr1G039910.16 , HORVU6Hr1G039910.17 , HORVU6Hr1G039910.10 , HORVU6Hr1G039910.11 , HORVU6Hr1G039910.12 , HORVU6Hr1G039910.13 , HORVU6Hr1G039910.15 , HORVU6Hr1G039910.18 , HORVU6Hr1G039910.19
Wheat TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS7A02G358700 , TraesCS7A02G358700 , TraesCS6B02G216800 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS7B02G268700 , TraesCS7B02G268700 , TraesCS7D02G364000 , TraesCS7D02G364000
Populus -


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cDNA sequences
Sobic.010G169900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G308400 expressed protein -
2 Sobic.002G079000 expressed protein -
3 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
4 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
5 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
6 Sobic.006G128100 lipase, putative, expressed -
7 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
8 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
9 Sobic.001G490900 growth regulator related protein, putative, expressed -
10 Sobic.007G005500 ECT protein, putative, expressed -
11 Sobic.009G249700 expressed protein -
12 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
13 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
14 Sobic.006G203300 GPR89A, putative, expressed -
15 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
16 Sobic.001G030000 FG-GAP repeat-containing protein, putative, expressed -
17 Sobic.009G122500 expressed protein -
18 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
19 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
20 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic010G169900 Sobic010G169900 Sobic001G308400 Sobic001G308400 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic006G128100 Sobic006G128100 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic001G490900 Sobic001G490900 Sobic010G169900--Sobic001G490900 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic007G087000 Sobic007G087000 Sobic002G079000--Sobic007G087000 Sobic002G079000--Sobic010G169900 Sobic010G213500 Sobic010G213500 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic002G079000--Sobic006G128100 Sobic006G250800 Sobic006G250800 Sobic002G079000--Sobic006G250800 Sobic007G172700 Sobic007G172700 Sobic002G079000--Sobic007G172700 Sobic001G237600 Sobic001G237600 Sobic002G079000--Sobic001G237600 Sobic002G079000--Sobic001G490900 Sobic009G128500--Sobic010G169900 Sobic009G128500--Sobic001G308400 Sobic003G193500 Sobic003G193500 Sobic009G128500--Sobic003G193500 Sobic009G122500 Sobic009G122500 Sobic009G128500--Sobic009G122500 Sobic009G128500--Sobic002G355800 Sobic009G116900 Sobic009G116900 Sobic009G128500--Sobic009G116900 Sobic010G223400 Sobic010G223400 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic009G128500--Sobic001G490900 Sobic002G355800--Sobic010G169900 Sobic002G355800--Sobic007G172700 Sobic002G355800--Sobic006G128100 Sobic002G355800--Sobic010G213500 Sobic002G355800--Sobic001G389200 Sobic001G475300 Sobic001G475300 Sobic002G355800--Sobic001G475300 Sobic003G058500 Sobic003G058500 Sobic002G355800--Sobic003G058500 Sobic009G162100 Sobic009G162100 Sobic002G355800--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic002G355800--Sobic005G177700 Sobic002G227500--Sobic001G308400 Sobic002G227500--Sobic003G021600 Sobic002G227500--Sobic001G156900 Sobic002G227500--Sobic010G169900 Sobic002G227500--Sobic004G265500 Sobic002G227500--Sobic003G043000 Sobic003G405500 Sobic003G405500 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic010G059500 Sobic010G059500 Sobic002G227500--Sobic010G059500 Sobic006G128100--Sobic003G394200 Sobic006G128100--Sobic001G308400 Sobic006G128100--Sobic002G355800 Sobic006G128100--Sobic010G169900 Sobic006G128100--Sobic002G079000 Sobic006G128100--Sobic010G213500 Sobic003G189600 Sobic003G189600 Sobic006G128100--Sobic003G189600 Sobic003G346400 Sobic003G346400 Sobic006G128100--Sobic003G346400 Sobic006G210700 Sobic006G210700 Sobic006G128100--Sobic006G210700 Sobic009G194000--Sobic003G181700 Sobic009G194000--Sobic003G021600 Sobic009G194000--Sobic001G490900 Sobic009G194000--Sobic010G169900 Sobic004G122900 Sobic004G122900 Sobic009G194000--Sobic004G122900 Sobic009G194000--Sobic001G308400 Sobic003G190200 Sobic003G190200 Sobic009G194000--Sobic003G190200 Sobic006G060000 Sobic006G060000 Sobic009G194000--Sobic006G060000 Sobic001G141400 Sobic001G141400 Sobic009G194000--Sobic001G141400 Sobic001G389200--Sobic006G060000 Sobic008G168200 Sobic008G168200 Sobic001G389200--Sobic008G168200 Sobic002G395500 Sobic002G395500 Sobic001G389200--Sobic002G395500 Sobic001G389200--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic001G389200--Sobic007G172700 Sobic001G389200--Sobic010G169900 Sobic001G389200--Sobic009G122500 Sobic001G490900--Sobic009G194000 Sobic001G490900--Sobic006G060000 Sobic001G114200 Sobic001G114200 Sobic001G490900--Sobic001G114200 Sobic001G490900--Sobic010G169900 Sobic001G490900--Sobic003G181700 Sobic001G490900--Sobic002G079000 Sobic001G490900--Sobic009G122500 Sobic001G490900--Sobic007G172700 Sobic001G490900--Sobic001G141400
Octagon: transcription factors


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