Gene annotation
Transcriptome id Sobic.007G005500.1,Sobic.007G005500.2
Synonym ECT7, Sb07g000670
Functional annotation ECT protein, putative, expressed
UniProt H0I4C3 , A0A1B6PF63
Pfam PF04146
Panther DB PTHR12357 PTHR12357:SF26
NCBI CDD KOG1901; Uncharacterized high-glucose-regulated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48110 : evolutionarily conserved C-terminal region 7
RAP-DB (Rice) LOC_Os01g22630.2,LOC_Os01g22630.1 : ECT protein, putative, expressed
MaizeGDB (Corn) Zm00025a040151 , Zm00025a012771 , Zm00025a030312
Brachypodium PNT70455 , KQK04214 , KQK04213
Barley HORVU3Hr1G045890.1 , HORVU3Hr1G045890.3 , HORVU3Hr1G045890.2
Wheat TraesCS3D02G199400 , TraesCS3D02G199400 , TraesCS3D02G199400 , TraesCS3D02G199400 , TraesCS1A02G105700 , TraesCS1D02G109300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G005500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
2 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
3 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
4 Sobic.006G260500 expressed protein -
5 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
6 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
7 Sobic.010G000800 PHD-finger domain containing protein, expressed -
8 Sobic.004G261600 expressed protein -
9 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
10 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
11 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
12 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
13 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
14 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
15 Sobic.005G110499 - K14006: protein transport protein SEC23
16 Sobic.008G085700 exocyst complex component 5, putative, expressed -
17 Sobic.003G023300 Alg9-like mannosyltransferase protein, putative, expressed K03846: alpha-1,2-mannosyltransferase
18 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
19 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
20 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G


Gene co-expression network
sample Sobic007G005500 Sobic007G005500 Sobic003G209200 Sobic003G209200 Sobic007G005500--Sobic003G209200 Sobic004G241900 Sobic004G241900 Sobic007G005500--Sobic004G241900 Sobic005G062200 Sobic005G062200 Sobic007G005500--Sobic005G062200 Sobic006G260500 Sobic006G260500 Sobic007G005500--Sobic006G260500 Sobic006G021700 Sobic006G021700 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic004G261600 Sobic004G261600 Sobic007G005500--Sobic004G261600 Sobic006G077300 Sobic006G077300 Sobic007G005500--Sobic006G077300 Sobic003G209200--Sobic007G005500 Sobic003G209200--Sobic006G260500 Sobic003G209200--Sobic006G077300 Sobic003G209200--Sobic006G021700 Sobic003G209200--Sobic005G062200 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600 Sobic004G241900--Sobic007G005500 Sobic004G241900--Sobic006G260500 Sobic004G241900--Sobic003G209200 Sobic004G241900--Sobic005G062200 Sobic003G114400 Sobic003G114400 Sobic004G241900--Sobic003G114400 Sobic006G196300 Sobic006G196300 Sobic004G241900--Sobic006G196300 Sobic006G277000 Sobic006G277000 Sobic004G241900--Sobic006G277000 Sobic001G263600 Sobic001G263600 Sobic004G241900--Sobic001G263600 Sobic004G241900--Sobic004G261600 Sobic008G088872 Sobic008G088872 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic002G401500 Sobic002G401500 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic002G042600 Sobic002G042600 Sobic005G062200--Sobic002G042600 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G260500--Sobic006G021700 Sobic008G124800 Sobic008G124800 Sobic006G021700--Sobic008G124800 Sobic006G021700--Sobic006G077300 Sobic002G340900 Sobic002G340900 Sobic006G021700--Sobic002G340900 Sobic005G059500 Sobic005G059500 Sobic006G021700--Sobic005G059500 Sobic006G021700--Sobic003G209200 Sobic003G346400 Sobic003G346400 Sobic006G021700--Sobic003G346400 Sobic006G021700--Sobic010G000800 Sobic006G021700--Sobic007G005500 Sobic006G021700--Sobic005G110499 Sobic001G308400 Sobic001G308400 Sobic010G169900--Sobic001G308400 Sobic002G079000 Sobic002G079000 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic002G355800 Sobic002G355800 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic006G128100 Sobic006G128100 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic001G490900 Sobic001G490900 Sobic010G169900--Sobic001G490900 Sobic004G265500 Sobic004G265500 Sobic010G000800--Sobic004G265500 Sobic004G322400 Sobic004G322400 Sobic010G000800--Sobic004G322400 Sobic003G163200 Sobic003G163200 Sobic010G000800--Sobic003G163200 Sobic003G379200 Sobic003G379200 Sobic010G000800--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic006G261400 Sobic006G261400 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic004G261600--Sobic007G005500 Sobic001G251200 Sobic001G251200 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic006G077300--Sobic006G260500 Sobic006G077300--Sobic006G021700 Sobic006G077300--Sobic003G209200 Sobic001G056800 Sobic001G056800 Sobic006G077300--Sobic001G056800 Sobic006G077300--Sobic002G401500 Sobic006G077300--Sobic003G114400 Sobic006G077300--Sobic007G005500 Sobic006G077300--Sobic005G062200 Sobic006G077300--Sobic002G042600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.