Gene annotation
Transcriptome id Sobic.003G114400.1
Synonym Sb03g009620
Functional annotation expressed protein
UniProt A0A1B6Q2N8
Pfam PF01663
Panther DB PTHR23071 PTHR23071:SF1
NCBI CDD KOG2126; Glycosylphosphatidylinositol anchor synthesis protein
KEGG Orthology K05288; GPI ethanolamine phosphate transferase 3 subunit O
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT5G17250 : Alkaline-phosphatase-like family protein
RAP-DB (Rice) LOC_Os10g08940.1 : expressed protein
MaizeGDB (Corn) Zm00025a023935
Brachypodium PNT62589 , PNT62588 , PNT62587 , PNT62590 , KQJ86448 , KQJ86447
Barley HORVU5Hr1G024500.29 , HORVU5Hr1G024500.28 , HORVU5Hr1G024500.27 , HORVU5Hr1G024500.26 , HORVU5Hr1G024500.25 , HORVU5Hr1G024500.24 , HORVU5Hr1G024500.23 , HORVU5Hr1G024500.22 , HORVU5Hr1G024500.21 , HORVU5Hr1G024500.20 , HORVU5Hr1G024500.31 , HORVU5Hr1G024500.32 , HORVU5Hr1G024500.16 , HORVU5Hr1G024500.17 , HORVU5Hr1G024500.14 , HORVU5Hr1G024500.15 , HORVU5Hr1G024500.12 , HORVU5Hr1G024500.13 , HORVU5Hr1G024500.10 , HORVU5Hr1G024500.11 , HORVU5Hr1G024500.18 , HORVU5Hr1G024500.19 , HORVU5Hr1G024500.4 , HORVU5Hr1G024500.5 , HORVU5Hr1G024500.6 , HORVU5Hr1G024500.7 , HORVU5Hr1G024500.1 , HORVU5Hr1G024500.2 , HORVU5Hr1G024500.3 , HORVU5Hr1G024500.8 , HORVU5Hr1G024500.9
Wheat TraesCS5B02G099800 , TraesCS5A02G093700 , TraesCS5D02G106000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G260500 expressed protein -
2 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
3 Sobic.008G088872 - -
4 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
5 Sobic.005G090300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
6 Sobic.006G184900 tetratricopeptide repeat domain containing protein, expressed K15176: RNA polymerase-associated protein CTR9
7 Sobic.002G252400 expressed protein K10706: SETX, senataxin
8 Sobic.003G316200 transmembrane protein 49, putative, expressed -
9 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
10 Sobic.007G005500 ECT protein, putative, expressed -
11 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
12 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
13 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
14 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
15 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
16 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
17 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
18 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
19 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
20 Sobic.005G034700 PHD-finger family protein, expressed -


Gene co-expression network
sample Sobic003G114400 Sobic003G114400 Sobic006G260500 Sobic006G260500 Sobic003G114400--Sobic006G260500 Sobic005G062200 Sobic005G062200 Sobic003G114400--Sobic005G062200 Sobic008G088872 Sobic008G088872 Sobic003G114400--Sobic008G088872 Sobic006G077300 Sobic006G077300 Sobic003G114400--Sobic006G077300 Sobic005G090300 Sobic005G090300 Sobic003G114400--Sobic005G090300 Sobic006G184900 Sobic006G184900 Sobic003G114400--Sobic006G184900 Sobic002G252400 Sobic002G252400 Sobic003G114400--Sobic002G252400 Sobic003G316200 Sobic003G316200 Sobic003G114400--Sobic003G316200 Sobic004G241900 Sobic004G241900 Sobic003G114400--Sobic004G241900 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic006G260500--Sobic004G241900 Sobic003G209200 Sobic003G209200 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic007G005500 Sobic007G005500 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G021700 Sobic006G021700 Sobic006G260500--Sobic006G021700 Sobic005G062200--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic005G062200--Sobic001G263600 Sobic002G401500 Sobic002G401500 Sobic005G062200--Sobic002G401500 Sobic005G062200--Sobic006G184900 Sobic002G042600 Sobic002G042600 Sobic005G062200--Sobic002G042600 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic005G162500 Sobic005G162500 Sobic008G088872--Sobic005G162500 Sobic001G370900 Sobic001G370900 Sobic008G088872--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic008G088872--Sobic009G131300 Sobic008G088872--Sobic006G184900 Sobic008G088872--Sobic005G062200 Sobic008G088872--Sobic001G263600 Sobic008G088872--Sobic002G042600 Sobic002G429300 Sobic002G429300 Sobic008G088872--Sobic002G429300 Sobic008G088872--Sobic002G335600 Sobic006G077300--Sobic006G260500 Sobic006G077300--Sobic006G021700 Sobic006G077300--Sobic003G209200 Sobic001G056800 Sobic001G056800 Sobic006G077300--Sobic001G056800 Sobic006G077300--Sobic002G401500 Sobic006G077300--Sobic003G114400 Sobic006G077300--Sobic007G005500 Sobic006G077300--Sobic005G062200 Sobic006G077300--Sobic002G042600 Sobic005G090300--Sobic001G056800 Sobic005G090300--Sobic005G062200 Sobic005G090300--Sobic003G114400 Sobic005G090300--Sobic001G263600 Sobic004G223300 Sobic004G223300 Sobic005G090300--Sobic004G223300 Sobic002G301100 Sobic002G301100 Sobic005G090300--Sobic002G301100 Sobic002G241600 Sobic002G241600 Sobic005G090300--Sobic002G241600 Sobic005G090300--Sobic008G088872 Sobic003G365100 Sobic003G365100 Sobic005G090300--Sobic003G365100 Sobic006G184900--Sobic002G335600 Sobic006G184900--Sobic002G429300 Sobic006G184900--Sobic008G088872 Sobic006G184900--Sobic002G042600 Sobic006G184900--Sobic001G370900 Sobic006G184900--Sobic009G131300 Sobic001G493700 Sobic001G493700 Sobic006G184900--Sobic001G493700 Sobic002G179400 Sobic002G179400 Sobic006G184900--Sobic002G179400 Sobic006G184900--Sobic005G062200 Sobic002G252400--Sobic003G114400 Sobic010G169900 Sobic010G169900 Sobic002G252400--Sobic010G169900 Sobic008G037700 Sobic008G037700 Sobic002G252400--Sobic008G037700 Sobic003G310300 Sobic003G310300 Sobic002G252400--Sobic003G310300 Sobic009G116900 Sobic009G116900 Sobic002G252400--Sobic009G116900 Sobic006G250800 Sobic006G250800 Sobic002G252400--Sobic006G250800 Sobic002G084800 Sobic002G084800 Sobic002G252400--Sobic002G084800 Sobic002G079000 Sobic002G079000 Sobic002G252400--Sobic002G079000 Sobic003G021600 Sobic003G021600 Sobic002G252400--Sobic003G021600 Sobic001G253300 Sobic001G253300 Sobic003G316200--Sobic001G253300 Sobic005G177700 Sobic005G177700 Sobic003G316200--Sobic005G177700 Sobic003G316200--Sobic003G365100 Sobic001G188400 Sobic001G188400 Sobic003G316200--Sobic001G188400 Sobic003G316200--Sobic006G250800 Sobic004G078700 Sobic004G078700 Sobic003G316200--Sobic004G078700 Sobic003G316200--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G316200--Sobic002G355800 Sobic003G316200--Sobic003G114400 Sobic004G241900--Sobic007G005500 Sobic004G241900--Sobic006G260500 Sobic004G241900--Sobic003G209200 Sobic004G241900--Sobic005G062200 Sobic004G241900--Sobic003G114400 Sobic006G196300 Sobic006G196300 Sobic004G241900--Sobic006G196300 Sobic006G277000 Sobic006G277000 Sobic004G241900--Sobic006G277000 Sobic004G241900--Sobic001G263600 Sobic004G261600 Sobic004G261600 Sobic004G241900--Sobic004G261600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.