Gene annotation
Transcriptome id Sobic.001G255800.1
Synonym Sb01g022770
Functional annotation CPuORF15 - conserved peptide uORF-containing transcript, expressed
UniProt C5WMB4
Pfam PF07035
Panther DB PTHR12897
NCBI CDD KOG2377; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12010 : -
RAP-DB (Rice) LOC_Os10g26140.2 : CPuORF15 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a007031
Brachypodium KQJ96606
Barley HORVU0Hr1G001400.1 , HORVU0Hr1G001400.3 , HORVU0Hr1G001400.2 , HORVU0Hr1G001400.5 , HORVU0Hr1G001400.4 , HORVU0Hr1G001400.7 , HORVU0Hr1G001400.6 , HORVU0Hr1G001400.9 , HORVU0Hr1G001400.8 , HORVU0Hr1G001400.15 , HORVU0Hr1G001400.14 , HORVU0Hr1G001400.17 , HORVU0Hr1G001400.16 , HORVU0Hr1G001400.11 , HORVU0Hr1G001400.10 , HORVU0Hr1G001400.13 , HORVU0Hr1G001400.12
Wheat TraesCS1B02G344200 , TraesCS1B02G344200 , TraesCS1A02G330600 , TraesCS1A02G330600 , TraesCS1D02G333000
Populus -


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cDNA sequences
Sobic.001G255800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G039000 GPI transamidase component Gpi16 subunit family protein, putative, expressed K05292: GPI-anchor transamidase subunit T
2 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
3 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
4 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
5 Sobic.003G296900 expressed protein -
6 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
7 Sobic.008G088872 - -
8 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
9 Sobic.003G171400 HEAT repeat family protein, putative, expressed -
10 Sobic.008G124800 expressed protein -
11 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2
12 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
13 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
14 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
15 Sobic.003G375200 mitotic checkpoint family protein, putative, expressed -
16 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
17 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
18 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
19 Sobic.006G260500 expressed protein -
20 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22


Gene co-expression network
sample Sobic001G255800 Sobic001G255800 Sobic003G039000 Sobic003G039000 Sobic001G255800--Sobic003G039000 Sobic001G065100 Sobic001G065100 Sobic001G255800--Sobic001G065100 Sobic004G053500 Sobic004G053500 Sobic001G255800--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic001G255800--Sobic002G401500 Sobic003G296900 Sobic003G296900 Sobic001G255800--Sobic003G296900 Sobic005G062200 Sobic005G062200 Sobic001G255800--Sobic005G062200 Sobic008G088872 Sobic008G088872 Sobic001G255800--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic001G255800--Sobic001G263600 Sobic003G171400 Sobic003G171400 Sobic001G255800--Sobic003G171400 Sobic003G039000--Sobic001G255800 Sobic003G039000--Sobic001G065100 Sobic004G131300 Sobic004G131300 Sobic003G039000--Sobic004G131300 Sobic003G146600 Sobic003G146600 Sobic003G039000--Sobic003G146600 Sobic003G375200 Sobic003G375200 Sobic003G039000--Sobic003G375200 Sobic004G223300 Sobic004G223300 Sobic003G039000--Sobic004G223300 Sobic010G080700 Sobic010G080700 Sobic003G039000--Sobic010G080700 Sobic003G039000--Sobic005G062200 Sobic002G179400 Sobic002G179400 Sobic003G039000--Sobic002G179400 Sobic002G042600 Sobic002G042600 Sobic001G065100--Sobic002G042600 Sobic001G065100--Sobic002G179400 Sobic001G065100--Sobic001G263600 Sobic001G065100--Sobic002G401500 Sobic001G493700 Sobic001G493700 Sobic001G065100--Sobic001G493700 Sobic001G065100--Sobic008G088872 Sobic004G322400 Sobic004G322400 Sobic001G065100--Sobic004G322400 Sobic001G065100--Sobic005G062200 Sobic001G065100--Sobic003G296900 Sobic004G053500--Sobic002G401500 Sobic004G053500--Sobic002G179400 Sobic002G335600 Sobic002G335600 Sobic004G053500--Sobic002G335600 Sobic006G166200 Sobic006G166200 Sobic004G053500--Sobic006G166200 Sobic006G032300 Sobic006G032300 Sobic004G053500--Sobic006G032300 Sobic005G133800 Sobic005G133800 Sobic004G053500--Sobic005G133800 Sobic002G340900 Sobic002G340900 Sobic004G053500--Sobic002G340900 Sobic004G053500--Sobic003G296900 Sobic005G162500 Sobic005G162500 Sobic004G053500--Sobic005G162500 Sobic002G401500--Sobic004G322400 Sobic009G131300 Sobic009G131300 Sobic002G401500--Sobic009G131300 Sobic002G401500--Sobic002G042600 Sobic002G401500--Sobic004G053500 Sobic002G401500--Sobic005G062200 Sobic002G429300 Sobic002G429300 Sobic002G401500--Sobic002G429300 Sobic002G401500--Sobic001G065100 Sobic002G401500--Sobic008G088872 Sobic002G401500--Sobic001G263600 Sobic003G043000 Sobic003G043000 Sobic003G296900--Sobic003G043000 Sobic003G296900--Sobic001G065100 Sobic003G296900--Sobic004G053500 Sobic003G308500 Sobic003G308500 Sobic003G296900--Sobic003G308500 Sobic004G265500 Sobic004G265500 Sobic003G296900--Sobic004G265500 Sobic003G241700 Sobic003G241700 Sobic003G296900--Sobic003G241700 Sobic003G296900--Sobic001G255800 Sobic010G000800 Sobic010G000800 Sobic003G296900--Sobic010G000800 Sobic003G296900--Sobic004G131300 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic005G062200--Sobic002G042600 Sobic003G209200 Sobic003G209200 Sobic005G062200--Sobic003G209200 Sobic003G114400 Sobic003G114400 Sobic005G062200--Sobic003G114400 Sobic005G062200--Sobic001G065100 Sobic005G062200--Sobic002G335600 Sobic008G088872--Sobic005G162500 Sobic001G370900 Sobic001G370900 Sobic008G088872--Sobic001G370900 Sobic008G088872--Sobic009G131300 Sobic008G088872--Sobic006G184900 Sobic008G088872--Sobic005G062200 Sobic008G088872--Sobic001G263600 Sobic008G088872--Sobic002G042600 Sobic008G088872--Sobic002G429300 Sobic008G088872--Sobic002G335600 Sobic001G263600--Sobic008G088872 Sobic001G263600--Sobic002G429300 Sobic002G142900 Sobic002G142900 Sobic001G263600--Sobic002G142900 Sobic001G263600--Sobic005G062200 Sobic008G098900 Sobic008G098900 Sobic001G263600--Sobic008G098900 Sobic001G263600--Sobic002G042600 Sobic001G273700 Sobic001G273700 Sobic001G263600--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G263600--Sobic003G072200 Sobic001G263600--Sobic009G131300 Sobic004G040500 Sobic004G040500 Sobic003G171400--Sobic004G040500 Sobic003G221400 Sobic003G221400 Sobic003G171400--Sobic003G221400 Sobic002G147600 Sobic002G147600 Sobic003G171400--Sobic002G147600 Sobic003G171400--Sobic001G255800 Sobic003G171400--Sobic002G401500 Sobic003G171400--Sobic002G179400 Sobic003G171400--Sobic001G493700 Sobic003G171400--Sobic002G335600 Sobic008G085300 Sobic008G085300 Sobic003G171400--Sobic008G085300
Octagon: transcription factors


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