Gene annotation
Transcriptome id Sobic.003G375200.1
Synonym
Functional annotation mitotic checkpoint family protein, putative, expressed
UniProt A0A1B6Q797
Pfam PF05557
Panther DB PTHR23168 PTHR23168:SF0
NCBI CDD KOG4593; Mitotic checkpoint protein MAD1
KEGG Orthology -
Gene Ontology GO:0007094; mitotic spindle assembly checkpoint


Orthologs (automatic annotation)
TAIR AT5G49880 : mitotic checkpoint family protein
RAP-DB (Rice) LOC_Os01g65580.1 : mitotic checkpoint family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037678 , Zm00025a026588
Brachypodium KQK04830 , KQK04829
Barley HORVU3Hr1G081720.2 , HORVU3Hr1G081720.7 , HORVU3Hr1G081720.6 , HORVU3Hr1G081720.5 , HORVU3Hr1G081720.9 , HORVU3Hr1G081720.8 , HORVU3Hr1G081720.11 , HORVU3Hr1G081720.10 , HORVU3Hr1G081720.17 , HORVU3Hr1G081720.16 , HORVU3Hr1G081720.15 , HORVU3Hr1G081720.14 , HORVU3Hr1G081720.19 , HORVU3Hr1G081720.18 , HORVU3Hr1G081720.30 , HORVU3Hr1G081720.28 , HORVU3Hr1G081720.29 , HORVU3Hr1G081720.22 , HORVU3Hr1G081720.23 , HORVU3Hr1G081720.20 , HORVU3Hr1G081720.21 , HORVU3Hr1G081720.26 , HORVU3Hr1G081720.27 , HORVU3Hr1G081720.24 , HORVU3Hr1G081720.25 , HORVU3Hr1G081720.13 , HORVU3Hr1G081720.12
Wheat TraesCS3D02G380600 , TraesCS3A02G389100 , TraesCS3A02G389100 , TraesCS3A02G389100 , TraesCS3B02G419700 , TraesCS3D02G380600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2
2 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
3 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
4 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
5 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
6 Sobic.002G179400 DNA binding protein, putative, expressed -
7 Sobic.003G039000 GPI transamidase component Gpi16 subunit family protein, putative, expressed K05292: GPI-anchor transamidase subunit T
8 Sobic.001G450000 nucleoporin, putative, expressed K14300: nuclear pore complex protein Nup133
9 Sobic.008G091300 PolI-like DNA polymerase, putative, expressed K02349: DNA polymerase theta
10 Sobic.004G256500 WD domain, G-beta repeat domain containing protein, expressed K12616: enhancer of mRNA-decapping protein 4
11 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
12 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
13 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
14 Sobic.008G051200 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
15 Sobic.008G124800 expressed protein -
16 Sobic.001G004400 - K14290: XPO1, exportin-1
17 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
18 Sobic.002G399800 PWWP domain containing protein, expressed -
19 Sobic.004G005100 peptidase family C78 domain containing protein, expressed -
20 Sobic.003G146600 pumilio-family RNA binding repeat containing protein, expressed K14790: nucleolar protein 9


Gene co-expression network
sample Sobic003G375200 Sobic003G375200 Sobic010G080700 Sobic010G080700 Sobic003G375200--Sobic010G080700 Sobic010G059500 Sobic010G059500 Sobic003G375200--Sobic010G059500 Sobic001G145400 Sobic001G145400 Sobic003G375200--Sobic001G145400 Sobic001G255800 Sobic001G255800 Sobic003G375200--Sobic001G255800 Sobic002G133300 Sobic002G133300 Sobic003G375200--Sobic002G133300 Sobic002G179400 Sobic002G179400 Sobic003G375200--Sobic002G179400 Sobic003G039000 Sobic003G039000 Sobic003G375200--Sobic003G039000 Sobic001G450000 Sobic001G450000 Sobic003G375200--Sobic001G450000 Sobic008G091300 Sobic008G091300 Sobic003G375200--Sobic008G091300 Sobic010G080700--Sobic003G375200 Sobic003G221400 Sobic003G221400 Sobic010G080700--Sobic003G221400 Sobic005G162500 Sobic005G162500 Sobic010G080700--Sobic005G162500 Sobic010G080700--Sobic002G179400 Sobic010G080700--Sobic010G059500 Sobic001G089600 Sobic001G089600 Sobic010G080700--Sobic001G089600 Sobic008G124800 Sobic008G124800 Sobic010G080700--Sobic008G124800 Sobic004G322400 Sobic004G322400 Sobic010G080700--Sobic004G322400 Sobic004G131300 Sobic004G131300 Sobic010G080700--Sobic004G131300 Sobic009G084900 Sobic009G084900 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G034100 Sobic010G034100 Sobic010G059500--Sobic010G034100 Sobic006G077200 Sobic006G077200 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic003G405500 Sobic003G405500 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic001G255800--Sobic003G039000 Sobic001G065100 Sobic001G065100 Sobic001G255800--Sobic001G065100 Sobic004G053500 Sobic004G053500 Sobic001G255800--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic001G255800--Sobic002G401500 Sobic003G296900 Sobic003G296900 Sobic001G255800--Sobic003G296900 Sobic005G062200 Sobic005G062200 Sobic001G255800--Sobic005G062200 Sobic008G088872 Sobic008G088872 Sobic001G255800--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic001G255800--Sobic001G263600 Sobic003G171400 Sobic003G171400 Sobic001G255800--Sobic003G171400 Sobic004G276400 Sobic004G276400 Sobic002G133300--Sobic004G276400 Sobic001G433800 Sobic001G433800 Sobic002G133300--Sobic001G433800 Sobic001G004400 Sobic001G004400 Sobic002G133300--Sobic001G004400 Sobic001G289800 Sobic001G289800 Sobic002G133300--Sobic001G289800 Sobic003G072200 Sobic003G072200 Sobic002G133300--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic002G133300--Sobic002G397500 Sobic002G133300--Sobic004G131300 Sobic001G194200 Sobic001G194200 Sobic002G133300--Sobic001G194200 Sobic001G493700 Sobic001G493700 Sobic002G133300--Sobic001G493700 Sobic002G179400--Sobic001G493700 Sobic002G042600 Sobic002G042600 Sobic002G179400--Sobic002G042600 Sobic002G179400--Sobic004G053500 Sobic002G429300 Sobic002G429300 Sobic002G179400--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic002G179400--Sobic006G184900 Sobic003G233400 Sobic003G233400 Sobic002G179400--Sobic003G233400 Sobic002G179400--Sobic002G133300 Sobic002G179400--Sobic001G065100 Sobic002G179400--Sobic004G322400 Sobic003G039000--Sobic001G255800 Sobic003G039000--Sobic001G065100 Sobic003G039000--Sobic004G131300 Sobic003G146600 Sobic003G146600 Sobic003G039000--Sobic003G146600 Sobic003G039000--Sobic003G375200 Sobic004G223300 Sobic004G223300 Sobic003G039000--Sobic004G223300 Sobic003G039000--Sobic010G080700 Sobic003G039000--Sobic005G062200 Sobic003G039000--Sobic002G179400 Sobic001G450000--Sobic003G375200 Sobic002G318800 Sobic002G318800 Sobic001G450000--Sobic002G318800 Sobic007G097400 Sobic007G097400 Sobic001G450000--Sobic007G097400 Sobic001G020000 Sobic001G020000 Sobic001G450000--Sobic001G020000 Sobic002G412700 Sobic002G412700 Sobic001G450000--Sobic002G412700 Sobic006G029100 Sobic006G029100 Sobic001G450000--Sobic006G029100 Sobic001G450000--Sobic010G080700 Sobic001G451300 Sobic001G451300 Sobic001G450000--Sobic001G451300 Sobic006G047900 Sobic006G047900 Sobic001G450000--Sobic006G047900 Sobic004G204100 Sobic004G204100 Sobic008G091300--Sobic004G204100 Sobic008G091300--Sobic003G375200 Sobic008G091300--Sobic002G179400 Sobic008G091300--Sobic004G053500 Sobic008G091300--Sobic003G233400 Sobic008G091300--Sobic004G085000 Sobic002G399800 Sobic002G399800 Sobic008G091300--Sobic002G399800 Sobic004G256500 Sobic004G256500 Sobic008G091300--Sobic004G256500 Sobic008G091300--Sobic001G451300
Octagon: transcription factors


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